Miyakogusa Predicted Gene

Lj3g3v3237870.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3237870.1 Non Chatacterized Hit- tr|I1LJW0|I1LJW0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.44605 PE,90.23,0,TRNA
(5-METHYLAMINOMETHYL-2-THIOURIDYLATE)-METHYLTRANSFERASE,tRNA-specific
2-thiouridylase; tRNA_Me_,CUFF.45491.1
         (267 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g14180.1                                                       505   e-143
Glyma12g06160.1                                                       368   e-102

>Glyma11g14180.1 
          Length = 502

 Score =  505 bits (1301), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 241/267 (90%), Positives = 251/267 (94%)

Query: 1   MGFDYVASGHYAKVIHPLEDQMDELSVLELSQDMVKDQTYFLSHLSQSQLKRLLFPLGCI 60
           MGFDYVASGHYA VIHP  D+ DE SVLELSQDMVKDQTYFLSHLSQSQLK+LLFPLGCI
Sbjct: 191 MGFDYVASGHYANVIHPCSDRRDEPSVLELSQDMVKDQTYFLSHLSQSQLKQLLFPLGCI 250

Query: 61  PKDEVRRLATKFDLPNKDRKDSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKH 120
           PKDEVR+LATKFDLPNKDRKDSQGICFLGKIRFSEFVARHIGEREG+ILEAETGDFLGKH
Sbjct: 251 PKDEVRKLATKFDLPNKDRKDSQGICFLGKIRFSEFVARHIGEREGVILEAETGDFLGKH 310

Query: 121 RGFWFYTIGQRQGLRLPGGPWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGL 180
           RGFWFYTIGQRQGLRLPGGPWYVVEKDVKNNVVFVSRNYFSFDKRRR+FRVGS KW SGL
Sbjct: 311 RGFWFYTIGQRQGLRLPGGPWYVVEKDVKNNVVFVSRNYFSFDKRRRVFRVGSFKWLSGL 370

Query: 181 PPSPTSQLKCKVRHGPGFYNCSLQMEVASDNQVDAAVVHISEDDQGLAAGQFAAFYEGRT 240
           PP  T+QL+CKVRHGPGFY+CSLQMEV +D Q  +AVV ISEDDQGLAAGQFAAFYEGRT
Sbjct: 371 PPGQTTQLQCKVRHGPGFYDCSLQMEVEADGQCHSAVVRISEDDQGLAAGQFAAFYEGRT 430

Query: 241 CIGSGVILESWDDQSFPVCAKALEIAR 267
           CIGSGVILE WDDQSFPVC KALEIAR
Sbjct: 431 CIGSGVILEFWDDQSFPVCTKALEIAR 457


>Glyma12g06160.1 
          Length = 441

 Score =  368 bits (944), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 191/267 (71%), Positives = 209/267 (78%), Gaps = 13/267 (4%)

Query: 1   MGFDYVASGHYAKVIHPLEDQMDELSVLELSQDMVKDQTYFLSHLSQSQLKRLLFPLGCI 60
           MGFDYVASGHYA VIHP  D MDE SVLELSQDMVKDQTYFLSHLSQSQL+RLLFPLGCI
Sbjct: 122 MGFDYVASGHYANVIHPCADWMDEPSVLELSQDMVKDQTYFLSHLSQSQLRRLLFPLGCI 181

Query: 61  PKDEVRRLATKFDLPNKDRKDSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKH 120
           PKDEVR+LATKFDLPNKDRKDSQGICFLGK +  +F      +   + +     + LG+ 
Sbjct: 182 PKDEVRKLATKFDLPNKDRKDSQGICFLGKKQVLKF------DFFSVSISVPFLNILGRE 235

Query: 121 RGFWFYTIGQRQGLRLPGGPWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGL 180
           +     +   RQ + L      + +   KNNVVFVSRNYFSFDKRRR+F VGS KW SGL
Sbjct: 236 K---VSSWKLRQEISLAN----IGDFGFKNNVVFVSRNYFSFDKRRRVFCVGSFKWLSGL 288

Query: 181 PPSPTSQLKCKVRHGPGFYNCSLQMEVASDNQVDAAVVHISEDDQGLAAGQFAAFYEGRT 240
           PP  TSQL+CKVRHGPGFY+CSLQMEV  D Q  +AVV ISEDDQGLAAGQFAAFYEGRT
Sbjct: 289 PPGQTSQLQCKVRHGPGFYDCSLQMEVEGDGQCRSAVVCISEDDQGLAAGQFAAFYEGRT 348

Query: 241 CIGSGVILESWDDQSFPVCAKALEIAR 267
           CIGSGVILE WDDQSFPVC KALEIAR
Sbjct: 349 CIGSGVILEFWDDQSFPVCTKALEIAR 375