Miyakogusa Predicted Gene
- Lj3g3v3236620.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v3236620.1 tr|B9HPB2|B9HPB2_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_821523 PE=4
SV=1,30.08,4e-18,seg,NULL,CUFF.45474.1
(356 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma11g14300.1 237 1e-62
Glyma13g41430.1 204 1e-52
Glyma13g41430.2 199 3e-51
Glyma12g06230.1 158 1e-38
Glyma15g03970.1 138 7e-33
Glyma02g16660.1 67 2e-11
Glyma07g16970.1 66 6e-11
Glyma18g41490.1 65 8e-11
Glyma10g03150.1 65 1e-10
Glyma11g34710.1 60 5e-09
Glyma19g33800.1 58 1e-08
Glyma18g03580.1 57 2e-08
Glyma03g30980.1 57 3e-08
Glyma02g41990.1 54 2e-07
Glyma03g16450.1 53 6e-07
>Glyma11g14300.1
Length = 346
Score = 237 bits (605), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 163/330 (49%), Positives = 196/330 (59%), Gaps = 65/330 (19%)
Query: 46 DDLLAELTHQMQMAQFMLQEDNKFDFPGIGSENLEP-WESIDWSPQSTLWSPLCSKHGSS 104
D+L++++ H FMLQ++ KFD IGS+ LE W+S+ + PQST S L S GSS
Sbjct: 63 DNLVSDMPH------FMLQDNTKFDSLSIGSDPLESLWDSVSY-PQSTPSSTLSSIQGSS 115
Query: 105 EGLSSKEPSPPTTPDNTRD--WESVNDMVGMLEKMKLDERGSSKYHSGYG--------VG 154
EG SS+EPSP N+ D W++ D+V MLEKMKLDER SSKYH GYG VG
Sbjct: 116 EG-SSQEPSP-----NSYDFCWDNTYDVVEMLEKMKLDERDSSKYHHGYGNHRFETSNVG 169
Query: 155 VCSDQSLFQEQIRATXXXXXXXXXXXXXXXXXT-----DHSHKSQQFQXXXXXXXXXXXX 209
VCS L QEQI+A T +H SQQFQ
Sbjct: 170 VCS---LLQEQIQAIQLSRLRQEQILSRKQKLTKYRGKNHGQISQQFQKKGKGVDDGCDN 226
Query: 210 XXXXXXXXXXXXXXXQTRP---GSLHQQTGSEMQAIFPGSSGSRATSCGTGVFLPRAGTN 266
+TRP HQQ + S+ TSCGTGVFLPR T+
Sbjct: 227 EC-------------RTRPPWHNRWHQQ------------AESKGTSCGTGVFLPRGRTS 261
Query: 267 APSSSESRNKRPGNKGCPTVLIPARVVQALQLHFDQIAATSGPTKPAGFPALNDVLVNNR 326
AP ESR +RPG KGC TVLIPARVVQALQLHF+Q+AAT+GP KP GFP L+DVLV+NR
Sbjct: 262 APL--ESR-ERPG-KGCSTVLIPARVVQALQLHFEQMAATTGP-KPGGFPPLHDVLVSNR 316
Query: 327 NGLYSLQKRQSRRKPEHVQNDMILPREWTY 356
+G+YSLQKRQSR KP H+QN+MILP+EWTY
Sbjct: 317 DGMYSLQKRQSRDKPAHIQNEMILPQEWTY 346
>Glyma13g41430.1
Length = 321
Score = 204 bits (519), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 137/315 (43%), Positives = 177/315 (56%), Gaps = 44/315 (13%)
Query: 43 DNDDDLLAELTHQMQMAQFMLQEDNKFDFPGIGSENLEPWESIDWSPQSTLWSPLCSKHG 102
DNDDD ++ELTH+M +F+L +D+ DF IGS +++ ++ S + SKH
Sbjct: 50 DNDDDFISELTHRM--TRFLLPDDDTSDFSSIGSHSMD----LENSSRD-------SKHS 96
Query: 103 SSEGLSSKEPSPPTTPDNTRDWESVNDMVGMLEKMKLDERGSSKYHSGYG-VGVCSDQSL 161
+ SS+E SPP TP+ R W+ DM+G EKMK +E G+ G+ S QSL
Sbjct: 97 PEDSGSSQEASPPATPEE-RCWKI--DMIGTFEKMKPNETGNFNNQFQNSNTGLYSYQSL 153
Query: 162 FQEQIRATXXXXXXXXXXXXXXXXXTDHSHKSQQFQXXXXXXXXXXXXXXXXXXXXXXXX 221
+EQIRA ++ KSQ
Sbjct: 154 IREQIRAIELSGVKQEHVAVSPKPKSNPRRKSQ--------------------AQEANKG 193
Query: 222 XXXQTRPGSLHQQTGSEMQAIFPGSSGSRATSCGTGVFLPRAGTNAPSSSESRNKRPGNK 281
+ RP + Q G+ M+A+F SGSR GTGVFLPR G A + SES NK+ K
Sbjct: 194 NGRRARPPQVPHQGGAGMRALFLDGSGSRG---GTGVFLPRGG-GATTPSESTNKQ--GK 247
Query: 282 GCPTVLIPARVVQALQLHFDQIAATSGPTKPAGFPALNDVLVNNRNGLYSLQKRQSRRKP 341
GC TVLIPARVVQALQLHFDQ+AATSGP K GFP L+DVLV+NR+G+YSLQK +SR+ P
Sbjct: 248 GCSTVLIPARVVQALQLHFDQMAATSGP-KAGGFPPLHDVLVSNRDGMYSLQKPESRKAP 306
Query: 342 EHVQNDMILPREWTY 356
+QND ILP+EWTY
Sbjct: 307 ASIQNDTILPQEWTY 321
>Glyma13g41430.2
Length = 315
Score = 199 bits (507), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 137/315 (43%), Positives = 177/315 (56%), Gaps = 50/315 (15%)
Query: 43 DNDDDLLAELTHQMQMAQFMLQEDNKFDFPGIGSENLEPWESIDWSPQSTLWSPLCSKHG 102
DNDDD ++ELTH+M +F+L +D+ DF IGS +++ ++ S + SKH
Sbjct: 50 DNDDDFISELTHRM--TRFLLPDDDTSDFSSIGSHSMD----LENSSRD-------SKHS 96
Query: 103 SSEGLSSKEPSPPTTPDNTRDWESVNDMVGMLEKMKLDERGSSKYHSGYG-VGVCSDQSL 161
+ SS+E SPP TP+ R W+ DM+G EKMK +E G+ G+ S QSL
Sbjct: 97 PEDSGSSQEASPPATPEE-RCWKI--DMIGTFEKMKPNETGNFNNQFQNSNTGLYSYQSL 153
Query: 162 FQEQIRATXXXXXXXXXXXXXXXXXTDHSHKSQQFQXXXXXXXXXXXXXXXXXXXXXXXX 221
+EQIRA ++ KSQ
Sbjct: 154 IREQIRAIEEHVAVSPKPK------SNPRRKSQ--------------------AQEANKG 187
Query: 222 XXXQTRPGSLHQQTGSEMQAIFPGSSGSRATSCGTGVFLPRAGTNAPSSSESRNKRPGNK 281
+ RP + Q G+ M+A+F SGSR GTGVFLPR G A + SES NK+ K
Sbjct: 188 NGRRARPPQVPHQGGAGMRALFLDGSGSRG---GTGVFLPRGG-GATTPSESTNKQ--GK 241
Query: 282 GCPTVLIPARVVQALQLHFDQIAATSGPTKPAGFPALNDVLVNNRNGLYSLQKRQSRRKP 341
GC TVLIPARVVQALQLHFDQ+AATSGP K GFP L+DVLV+NR+G+YSLQK +SR+ P
Sbjct: 242 GCSTVLIPARVVQALQLHFDQMAATSGP-KAGGFPPLHDVLVSNRDGMYSLQKPESRKAP 300
Query: 342 EHVQNDMILPREWTY 356
+QND ILP+EWTY
Sbjct: 301 ASIQNDTILPQEWTY 315
>Glyma12g06230.1
Length = 106
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 80/110 (72%), Positives = 92/110 (83%), Gaps = 5/110 (4%)
Query: 247 SGSRATSCGTGVFLPRAGTNAPSSSESRNKRPGNKGCPTVLIPARVVQALQLHFDQIAAT 306
+GSR SCGTGVFLP T+AP S KRP +KGC TVLIPARVVQALQLHF+Q+AAT
Sbjct: 2 AGSRGKSCGTGVFLPCGRTSAPLESR---KRP-DKGCSTVLIPARVVQALQLHFEQMAAT 57
Query: 307 SGPTKPAGFPALNDVLVNNRNGLYSLQKRQSRRKPEHVQNDMILPREWTY 356
SGP KP GFP L+DVLV+NR+G+YSLQKRQSR KP H+QN+MILP+EWTY
Sbjct: 58 SGP-KPGGFPPLHDVLVSNRDGMYSLQKRQSRYKPAHIQNEMILPQEWTY 106
>Glyma15g03970.1
Length = 111
Score = 138 bits (348), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 76/118 (64%), Positives = 90/118 (76%), Gaps = 7/118 (5%)
Query: 239 MQAIFPGSSGSRATSCGTGVFLPRAGTNAPSSSESRNKRPGNKGCPTVLIPARVVQALQL 298
M+ +F GSRA GTGVFLPR G A + S+S NK+ KGC TVLIPARVVQALQL
Sbjct: 1 MRVLFLKGPGSRA---GTGVFLPR-GDVATTPSDSTNKQ--GKGCSTVLIPARVVQALQL 54
Query: 299 HFDQIAATSGPTKPAGFPALNDVLVNNRNGLYSLQKRQSRRKPEHVQNDMILPREWTY 356
HFDQ+AATSGP K GFP L+DVLV+NR+G+YSLQK +S+ P +QND ILP+EWTY
Sbjct: 55 HFDQMAATSGP-KAGGFPPLHDVLVSNRDGMYSLQKPRSQNAPASIQNDTILPQEWTY 111
>Glyma02g16660.1
Length = 179
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 67/128 (52%), Gaps = 18/128 (14%)
Query: 236 GSEMQAIFPGSSGSRATSCGTGVFLP-RAGTNAPSSSESRNKRPGNKGCPTVLIPARVVQ 294
G M+AIF GS G R SCGTGVFLP RAGTN S KRP C +L+PARVVQ
Sbjct: 63 GPGMRAIFLGS-GHR--SCGTGVFLPQRAGTNFQPS-----KRPA---CAPILLPARVVQ 111
Query: 295 ALQLHFDQIAATSGPTKPAGF-PALNDVLVNNRNGLYSLQKRQSRRKPEHVQN-----DM 348
AL L+ + P + + P + NN S QK S++ QN ++
Sbjct: 112 ALNLNVQALGVLISPPQVQRYNPRCREAYNNNSTEKKSDQKDASKQCRFISQNECSSPEI 171
Query: 349 ILPREWTY 356
LP+EWTY
Sbjct: 172 FLPKEWTY 179
>Glyma07g16970.1
Length = 396
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 69/131 (52%), Gaps = 15/131 (11%)
Query: 232 HQQTGSEMQAIFPGSSGSRATSCGTGVFLPRAGTNAPSSSESRNKRPGNKGCPTVLIPAR 291
+QQ GS M+A+F G+ R GTGVFLPR + P ESR K C TVL+P R
Sbjct: 275 NQQYGSGMRAVFLGNPSGRRECAGTGVFLPRR-VDIP---ESRKK----PACSTVLVPTR 326
Query: 292 VVQALQLHFDQIAATSGPTKPAGFPAL----NDVLVNNRNGLYSL-QKRQSRRKPEHV-Q 345
V QAL L+ D + P F A N V+ G Y L Q++++ KP+
Sbjct: 327 VAQALNLNLDDMIVGQ-PQHLQRFNACPNIENGAAVSRLRGNYVLSQQKRNLNKPQPAGY 385
Query: 346 NDMILPREWTY 356
+++ LP+EWTY
Sbjct: 386 HEIRLPQEWTY 396
>Glyma18g41490.1
Length = 402
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 68/132 (51%), Gaps = 17/132 (12%)
Query: 232 HQQTGSEMQAIFPGSSGSRATSCGTGVFLPRAGTNAPSSSESRNKRPGNKGCPTVLIPAR 291
+Q GS M+A+F G+ R GTGVFLPR + P E R K + C TVL+P R
Sbjct: 281 NQNYGSGMRAVFLGNPSGRRECAGTGVFLPRR-VDTP---EPRKK----QACSTVLVPTR 332
Query: 292 VVQALQLHFDQIAATSGPTKPAGFPAL----NDVLVNNRNGLYSL---QKRQSRRKPEHV 344
V QAL L+ D + A P F A N V+ + Y L QKR + +P V
Sbjct: 333 VAQALNLNLDDMMAGQ-PQHLQRFNASSNMENGAAVSRQRSNYVLSQQQKRNLKSQPA-V 390
Query: 345 QNDMILPREWTY 356
+++ LP+EWTY
Sbjct: 391 YHEIRLPQEWTY 402
>Glyma10g03150.1
Length = 199
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 66/128 (51%), Gaps = 18/128 (14%)
Query: 236 GSEMQAIFPGSSGSRATSCGTGVFLP-RAGTNAPSSSESRNKRPGNKGCPTVLIPARVVQ 294
G M+AIF GS+ SCGTGVFLP RAGTN S KRP C +L+PA V+Q
Sbjct: 83 GPGMRAIFLGST---HRSCGTGVFLPQRAGTNFQPS-----KRPA---CAPILVPAGVIQ 131
Query: 295 ALQLHFDQIAATSGPTKPAGF-PALNDVLVNNRNGLYSLQKRQSRRKPEHVQN-----DM 348
AL L+ + P + + P +V NN S QK S++ QN ++
Sbjct: 132 ALNLNVRALGLQISPPQVQSYDPRCREVYNNNSEEKKSDQKDSSKQCRFISQNQCSTPEI 191
Query: 349 ILPREWTY 356
LP+EWTY
Sbjct: 192 FLPKEWTY 199
>Glyma11g34710.1
Length = 397
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 56/108 (51%), Gaps = 12/108 (11%)
Query: 255 GTGVFLPRAGTNAPSSSESRNKRPGNKGCPTVLIPARVVQALQLHFDQIAATSGPTKPAG 314
GTGVFLPR + + SE R ++ GC VL+PA+VV AL L+ D + T+ P
Sbjct: 296 GTGVFLPR---HYETPSEPRRQK---TGCAPVLLPAKVVHALNLNIDDLNGTTQPRFSNA 349
Query: 315 FPALNDVLVNNRNGLY------SLQKRQSRRKPEHVQNDMILPREWTY 356
F + ++ RN L Q+ S R+ E ++ LP+EWTY
Sbjct: 350 FATDYEAILARRNALLMQEQQQQQQRLISVRREEAANYEIRLPQEWTY 397
>Glyma19g33800.1
Length = 190
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 65/137 (47%), Gaps = 30/137 (21%)
Query: 232 HQQTGSEMQAIFPGSSGSRATSCGTGVFLP-RAGTNAPSSSESRNKRPGNKGCPTVLIPA 290
H G MQA+F S SCGTGVFLP +AGT + S C VL+PA
Sbjct: 72 HATGGPGMQAVFLVSGQG---SCGTGVFLPQKAGTKSTS----------KPACAPVLLPA 118
Query: 291 RVVQALQLHFDQIAATSGPTKPAGFPALNDVLVNNRNGLYSLQKRQSRRKPEHVQN---- 346
RVVQAL L Q+ P++ + + + V+ + + K+++ +K +Q
Sbjct: 119 RVVQALNLKVHQLGLQISPSQAPKYSSRSGVVSTSES-----TKKKTDQKDALMQCSVVS 173
Query: 347 -------DMILPREWTY 356
++ LP+EWTY
Sbjct: 174 QSQSSSPEIFLPKEWTY 190
>Glyma18g03580.1
Length = 361
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 54/102 (52%), Gaps = 12/102 (11%)
Query: 255 GTGVFLPRAGTNAPSSSESRNKRPGNKGCPTVLIPARVVQALQLHFDQIAATSGPTKPAG 314
GTGVFLPR + + SE K+ GC VL+PA+VV AL L+ D + T+ P
Sbjct: 272 GTGVFLPR---HYETPSEPPRKK---TGCAPVLLPAKVVHALNLNIDDLNGTTQPRFSNA 325
Query: 315 FPALNDVLVNNRNGLYSLQKRQSRRKPEHVQNDMILPREWTY 356
F ++ RN L +Q+R+ E ++ LP+EWTY
Sbjct: 326 FAVDYGAILARRNALL-MQQRE-----EAANYEIRLPQEWTY 361
>Glyma03g30980.1
Length = 193
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 64/134 (47%), Gaps = 22/134 (16%)
Query: 232 HQQTGSEMQAIFPGSSGSRATSCGTGVFLP-RAGTNAPSSSESRNKRPGNKGCPTVLIPA 290
H G MQA+F S SCGTGVFLP +AGT + ++P C VL+PA
Sbjct: 73 HATGGPGMQAVFLVSGQG---SCGTGVFLPQKAGTKS-------IRKPA---CAPVLLPA 119
Query: 291 RVVQALQLHFDQIAATSGPTK-PAGFPALNDVLVNNRNGLYSLQKRQSRRKPEHVQN--- 346
RVVQAL L Q+ P++ P P +V + + QK ++ V +
Sbjct: 120 RVVQALNLKVHQLGLQISPSQAPKYSPRSGEVCTSESTKKKTNQKDALKQCSVVVSHESQ 179
Query: 347 ----DMILPREWTY 356
++ LP+EWTY
Sbjct: 180 SSSPEIFLPKEWTY 193
>Glyma02g41990.1
Length = 382
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 55/114 (48%), Gaps = 10/114 (8%)
Query: 245 GSSGSRATSCGTGVFLPRAGTNAPSSSESRNKRPGNKGCPT--VLIPARVVQALQLHFDQ 302
GS ++ GTGVFLPR P S + K C VL+PA+V+ AL L+ D+
Sbjct: 277 GSGATKRGCAGTGVFLPRQYGAPPDSRK--------KTCCAAPVLVPAKVIHALNLNIDE 328
Query: 303 IAATSGPTKPAGFPALNDVLVNNRNGLYSLQKRQSRRKPEHVQNDMILPREWTY 356
+ A P + F D L+ RN L QK RR+ + LP+EWTY
Sbjct: 329 LNAAGQPRFSSAFGVDYDALLARRNALLLQQKLSMRREEAANYEALRLPQEWTY 382
>Glyma03g16450.1
Length = 372
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 63/136 (46%), Gaps = 18/136 (13%)
Query: 236 GSEMQAIFPGSSGSRATSCGTGVFLPRAGTNAPSSSESRNKRPGNK-GCPTVLIPARVVQ 294
GS M+A+F +G S GTGVFLPR ++ N K GC TVL+P RV Q
Sbjct: 240 GSRMRAVF--LAGKIEKSTGTGVFLPRCVDTRNNNDSRNNNDSRKKPGCITVLVPDRVAQ 297
Query: 295 ALQLHFDQIAATSGPT--KPAGFPALNDVLVNN----------RNGLYSLQKRQSRR--K 340
L L+ D + KP F N V+ G QKR + + +
Sbjct: 298 VLNLNLDGVVGGGHKQQHKPR-FIGENGSAVSRVRSNNYNNNNHYGYSHHQKRNNMKLQQ 356
Query: 341 PEHVQNDMILPREWTY 356
P+ V +++ LP+EWTY
Sbjct: 357 PQVVNHEIQLPQEWTY 372