Miyakogusa Predicted Gene

Lj3g3v3235430.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3235430.1 tr|B9HRS5|B9HRS5_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_557298 PE=4
SV=1,30.38,2e-18,NAD_binding_10,NULL; seg,NULL; OS05G0291700
PROTEIN,NULL; NITROGEN METABOLIC REGULATION PROTEIN NMR-,CUFF.45503.1
         (520 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g14410.1                                                       676   0.0  
Glyma12g06350.1                                                       660   0.0  
Glyma12g05030.1                                                        72   2e-12
Glyma11g12900.1                                                        70   6e-12

>Glyma11g14410.1 
          Length = 516

 Score =  676 bits (1744), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 351/492 (71%), Positives = 383/492 (77%), Gaps = 5/492 (1%)

Query: 30  IFAKKSGSFPSFGLGGTKPRDDXXXXXXXXXXXXXXXPFRLNFGKIPDVTSLIPVVNNNS 89
           +FAKKSGSFPSFGLG  KP+DD               PFRL+FGKIPDVTSLIPV +N S
Sbjct: 29  VFAKKSGSFPSFGLG--KPKDDSSSAEEKDNSSNSN-PFRLDFGKIPDVTSLIPVPSNTS 85

Query: 90  -PGFSLGNARRKDPSTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGSAQELARLAAE 148
            PGFS GN RRKDPSTVFVAGATGQAG+RIAQTLLREGFSVRAGVPELGSAQELARLA +
Sbjct: 86  APGFSFGNTRRKDPSTVFVAGATGQAGIRIAQTLLREGFSVRAGVPELGSAQELARLATQ 145

Query: 149 YKIISKEEAKRLNAVQSSFDDTESIAKAIGNASKVVVTIGATENGPTAEVSISDXXXXXX 208
           YKIIS E+AKRLNAVQSSFD+ ++IAKAIGNA KVVVTIG TENGPTAEVS SD      
Sbjct: 146 YKIISNEQAKRLNAVQSSFDNADTIAKAIGNAGKVVVTIGPTENGPTAEVSSSDALQVVQ 205

Query: 209 XXXXXXXXXXXXIYDDSSAGTSTYNVLDGITSFFNNIFSRSQPLTVQEFLQKVIETDVKY 268
                       +YD+SS G STYNVLDG++SFFNN+FSRSQPLT+QEFLQKVIETDVKY
Sbjct: 206 AAQLAGVGHVAIVYDESSTGASTYNVLDGLSSFFNNLFSRSQPLTIQEFLQKVIETDVKY 265

Query: 269 TFIKTRLTDDYTPESSYNVVVVGEESTSANDYKVAKSKIASLVADVFSNTEVAENKVVQV 328
           TFIKT LTDD++PESSYNVVV+GE S SANDYKVAKSKIASLVADVFSNTEVAENKVV+V
Sbjct: 266 TFIKTSLTDDFSPESSYNVVVLGEGSASANDYKVAKSKIASLVADVFSNTEVAENKVVKV 325

Query: 329 YSDPEAPLKRVDELFSTIPVDGRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 388
           +SDP APLKRVDELFS IP DGRR                                    
Sbjct: 326 HSDPSAPLKRVDELFSPIPEDGRRKAYAEMQEKTKAEEEARVAAEKAREASESAKKLEEE 385

Query: 389 XXXXSQQETQASSLAKEAQEKAVAAGTSVEDLLSKAKDFGAGISWQKISSQIATSVQKPD 448
               SQQET+A+SLA+EAQEKA A G SVE+LL+KAKDFGAG SW+K+SSQI TS+QKPD
Sbjct: 386 VKRLSQQETRAASLAQEAQEKAEAGGASVENLLNKAKDFGAGFSWEKLSSQITTSIQKPD 445

Query: 449 EDEKPKVQVATVRGQAKARSLTPNKAVVKQTSPRSVATKPKEENRKQAETAKEVRKVFGG 508
           EDEKPKVQ+ATVRGQAKAR+L PNKAVVKQT  RS A KPK E  KQ ET KEVRKVFGG
Sbjct: 446 EDEKPKVQLATVRGQAKARNLAPNKAVVKQTPQRSAA-KPKVEKPKQTETPKEVRKVFGG 504

Query: 509 LFKQETIYIDDD 520
           LFKQETIY+DDD
Sbjct: 505 LFKQETIYVDDD 516


>Glyma12g06350.1 
          Length = 513

 Score =  660 bits (1703), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 347/492 (70%), Positives = 379/492 (77%), Gaps = 8/492 (1%)

Query: 30  IFAKKSGSFPSFGLGGTKPRDDXXXXXXXXXXXXXXXPFRLNFGKIPDVTSLIPVVNNNS 89
           +FAKKSGSFPSFGLG  KP+DD               PFRL+FGKI    SLIPV +N S
Sbjct: 29  VFAKKSGSFPSFGLG--KPKDDSSSSTEEKDGSSNSNPFRLDFGKI----SLIPVPSNTS 82

Query: 90  -PGFSLGNARRKDPSTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGSAQELARLAAE 148
            PGFS GN RRKDPSTVFVAGATGQAG+RIAQTLLREGFSVRAGVPEL SAQELARLAA+
Sbjct: 83  APGFSFGNPRRKDPSTVFVAGATGQAGIRIAQTLLREGFSVRAGVPELASAQELARLAAQ 142

Query: 149 YKIISKEEAKRLNAVQSSFDDTESIAKAIGNASKVVVTIGATENGPTAEVSISDXXXXXX 208
           YKIIS E+AKRLNAVQSSFD+ ++IAKAIGNASKVVVTIG TENGPT EVS SD      
Sbjct: 143 YKIISNEQAKRLNAVQSSFDNADTIAKAIGNASKVVVTIGPTENGPTTEVSASDALQVVQ 202

Query: 209 XXXXXXXXXXXXIYDDSSAGTSTYNVLDGITSFFNNIFSRSQPLTVQEFLQKVIETDVKY 268
                       IYD+SSAG STYNVLDG++SFF+N+FSRSQPLT+QEFLQKVIETDVKY
Sbjct: 203 AAQLAGVGHVAVIYDESSAGASTYNVLDGLSSFFSNLFSRSQPLTIQEFLQKVIETDVKY 262

Query: 269 TFIKTRLTDDYTPESSYNVVVVGEESTSANDYKVAKSKIASLVADVFSNTEVAENKVVQV 328
           TFIKT LTDD++PESSYNVVV+GE S  ANDYKVAKSKIASLVADVFSNTEVAENKVV+V
Sbjct: 263 TFIKTSLTDDFSPESSYNVVVLGEGSDGANDYKVAKSKIASLVADVFSNTEVAENKVVKV 322

Query: 329 YSDPEAPLKRVDELFSTIPVDGRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 388
           YSDP APLKRVDELFS IP DGRR                                    
Sbjct: 323 YSDPGAPLKRVDELFSPIPEDGRRKAYAEMQEKAKAEEEARVAAEKANEASESAKKLEEE 382

Query: 389 XXXXSQQETQASSLAKEAQEKAVAAGTSVEDLLSKAKDFGAGISWQKISSQIATSVQKPD 448
                QQE +A+SLA+EAQEKA AAG SVE+LL+KAKDFGAG SW+K+SSQI TS+QKPD
Sbjct: 383 VKKLLQQEARAASLAQEAQEKAEAAGASVENLLNKAKDFGAGFSWEKLSSQITTSIQKPD 442

Query: 449 EDEKPKVQVATVRGQAKARSLTPNKAVVKQTSPRSVATKPKEENRKQAETAKEVRKVFGG 508
           EDEKPKVQ+ATVRGQAKAR+L PNKAVV+QTS RS A KPK E  KQAET KEVR VFGG
Sbjct: 443 EDEKPKVQLATVRGQAKARNLAPNKAVVRQTSQRS-AGKPKVEKPKQAETPKEVRNVFGG 501

Query: 509 LFKQETIYIDDD 520
           LFKQETIY+DDD
Sbjct: 502 LFKQETIYVDDD 513


>Glyma12g05030.1 
          Length = 528

 Score = 71.6 bits (174), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/262 (25%), Positives = 121/262 (46%), Gaps = 27/262 (10%)

Query: 100 KDPSTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGSAQELARLAAEYKIISK----E 155
           KD + VFVAGATG+ G R  + L++ GF VRAGV     A  L +   + K+       +
Sbjct: 80  KDDNLVFVAGATGRVGSRTVRELIKLGFRVRAGVRSAQRAGALVQSVEQLKLDGASGGGQ 139

Query: 156 EAKRLNAVQSSFDDTESIAKAIGNASKVVVTIGATE------NGPTAEVSISDXXXXXXX 209
             ++L  V+   +  E+I  A+G+AS V+ +IGA+E       GP       D       
Sbjct: 140 AVEKLEIVECDLEKPETIGSALGDASTVICSIGASEKEVFDITGPFR----IDYQATKNL 195

Query: 210 XXXXXXXXXXXIYDDSSAGTSTYNVLDGITSFFNNIFSRSQPLTVQEFLQKVIETDVKYT 269
                          +S GT+       I + F  +      +  ++  + ++ + + YT
Sbjct: 196 IDAATVAKVNHFILVTSLGTNKIGFPAAILNLFWGVL-----VWKRKAEEALLASGLPYT 250

Query: 270 FIKT----RLTDDYTPESSYNVVVVGEESTSANDYKVAKSKIASLVADVFSNTEVAENKV 325
            ++     R TD +  + ++N+ +  E++       V+  +IA L+A +  N +++  K+
Sbjct: 251 IVRPGGMERPTDAF--KETHNITLSTEDTLFGG--LVSNLQIAELLAVMAKNRDLSYCKI 306

Query: 326 VQVYSDPEAPLKRVDELFSTIP 347
           V+  ++  APL  ++EL + IP
Sbjct: 307 VEAIAETTAPLTPMEELLAKIP 328


>Glyma11g12900.1 
          Length = 491

 Score = 70.1 bits (170), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 65/262 (24%), Positives = 119/262 (45%), Gaps = 27/262 (10%)

Query: 100 KDPSTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGSAQELARLAAEYKIISK----E 155
           KD + VFVAGATG+ G R  + L++ GF VRAGV     A  L +   + K+       +
Sbjct: 20  KDDNLVFVAGATGRVGSRTVRELIKLGFRVRAGVRSAQRAGALVQSVEQLKLDGANGGVQ 79

Query: 156 EAKRLNAVQSSFDDTESIAKAIGNASKVVVTIGATE------NGPTAEVSISDXXXXXXX 209
             ++L  V+   +  E+I  A+GNAS V+ +IGA+E       GP       D       
Sbjct: 80  AVEKLEIVECDLEKPETIGSALGNASTVICSIGASEKEVFDITGPFR----IDYLATKNL 135

Query: 210 XXXXXXXXXXXIYDDSSAGTSTYNVLDGITSFFNNIFSRSQPLTVQEFLQKVIETDVKYT 269
                          +S GT+       I + F  +         ++  + ++ + + YT
Sbjct: 136 IDAATVTKVNHFILVTSLGTNKIGFPAAILNLFWGVLVWK-----RKAEEALLASGLPYT 190

Query: 270 FIKT----RLTDDYTPESSYNVVVVGEESTSANDYKVAKSKIASLVADVFSNTEVAENKV 325
            ++     R TD +  + ++N+ +  E++       V+  +IA L+A +  N +++  K+
Sbjct: 191 IVRPGGMERPTDAF--KETHNITLSTEDTLFGG--LVSNLQIAELLAVMAKNRDLSYCKI 246

Query: 326 VQVYSDPEAPLKRVDELFSTIP 347
           V+  ++  +PL  ++ L + IP
Sbjct: 247 VEAIAETTSPLTPMEGLLARIP 268