Miyakogusa Predicted Gene

Lj3g3v3213220.3
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3213220.3 Non Chatacterized Hit- tr|H9H6E0|H9H6E0_MONDO
Uncharacterized protein OS=Monodelphis domestica
GN=NU,35.2,2e-18,NUDIX,NUDIX hydrolase domain; SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL; no description,NUDIX ,CUFF.45459.3
         (249 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g08000.1                                                       408   e-114
Glyma11g15450.2                                                       244   7e-65
Glyma03g02800.1                                                       141   7e-34

>Glyma12g08000.1 
          Length = 301

 Score =  408 bits (1048), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 195/230 (84%), Positives = 207/230 (90%), Gaps = 2/230 (0%)

Query: 22  QYGGCALYTGGASDHE--PHLCLHLGLTDYRTFVGTNLSPLWERFLIPSEDDSVICQHTS 79
           +YGGC L+    SDHE  PHLCLHLGLTDYRTFVGTNLSPLWERFL+PSEDDSV+CQHTS
Sbjct: 72  RYGGCVLHAKDGSDHECEPHLCLHLGLTDYRTFVGTNLSPLWERFLVPSEDDSVLCQHTS 131

Query: 80  RALGNGAVVETIDKKILVLQRSNNVGEFPGYFVFLGGHPEPQEVGIASHQHVRELMESIN 139
             LGNGAVVET D KILVLQRS+NVGEFPG+FVF GGHPEPQE+GI SHQ+ +EL ESIN
Sbjct: 132 NPLGNGAVVETNDNKILVLQRSDNVGEFPGHFVFPGGHPEPQEIGITSHQYNKELTESIN 191

Query: 140 IKVSQEMFDSIVREVVEEIGVPASSLSNPAFIGISRRDLNVRPAAFFFIKCNLDSKEVQQ 199
            KVSQEMFDSIVREVVEEIGVPASSLS PAFIGISRR+LNVRPAAFFFIKC LDSKEV+Q
Sbjct: 192 TKVSQEMFDSIVREVVEEIGVPASSLSIPAFIGISRRNLNVRPAAFFFIKCGLDSKEVRQ 251

Query: 200 FYSSAQDGYESTQLYAFPMDELEKMASRMPGCHRGGFALYKLMVDTMKIT 249
           FYSSAQDGYESTQLYA PM E+E M SRMPGCHRGGFALYKLMVDT KIT
Sbjct: 252 FYSSAQDGYESTQLYAVPMIEIENMTSRMPGCHRGGFALYKLMVDTRKIT 301


>Glyma11g15450.2 
          Length = 236

 Score =  244 bits (623), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 121/148 (81%), Positives = 129/148 (87%), Gaps = 5/148 (3%)

Query: 102 NNVGEFPGYFVFLGGHPEPQEVGIASHQHVRELMESINIKVSQEMFDSIVREVVEEIGVP 161
           NNVGEFPG+FVF GGHPEPQE+GI SHQ+ +EL ES+NIKVSQE+FDSIV EVVEEIGVP
Sbjct: 94  NNVGEFPGHFVFPGGHPEPQEIGITSHQYDKELTESVNIKVSQEIFDSIVHEVVEEIGVP 153

Query: 162 ASSLSNPAFIGISRRDLNVRPAAFFFIKCNLDSKEVQQFYSSAQDGYESTQLYAFPMDEL 221
           ASSLS PAFIGISRR+LNVRPAAFF IKCNLDSKEVQQFYSS QDGYESTQLY  PM E+
Sbjct: 154 ASSLSIPAFIGISRRNLNVRPAAFFSIKCNLDSKEVQQFYSSTQDGYESTQLYDVPMIEV 213

Query: 222 EKMASRMPGCHRGGFALYKLMVDTMKIT 249
           E M SRMP     GFALYKLMVDT KIT
Sbjct: 214 ENMTSRMP-----GFALYKLMVDTRKIT 236


>Glyma03g02800.1 
          Length = 156

 Score =  141 bits (355), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 85/161 (52%), Positives = 99/161 (61%), Gaps = 44/161 (27%)

Query: 51  TFVGTNLSPLWERFLIPSEDDSVICQHTSRALGNGAVVETIDKKILVLQRSNNVGEFPGY 110
           TFVGTNLSP+WERFL P EDDSV+CQHTS  LGNGAVVET D KIL              
Sbjct: 1   TFVGTNLSPMWERFLFPLEDDSVLCQHTSSPLGNGAVVETNDNKIL-------------- 46

Query: 111 FVFLGGHPEPQEVGIASHQHVRELMESINIKVSQEMFDSIVREVVEEIGVPAS------- 163
                    PQE+GI SHQ+ +EL ESIN+KVSQE+F SIV EVVEEIGVPAS       
Sbjct: 47  ---------PQEIGITSHQYDKELTESINVKVSQEIFYSIVHEVVEEIGVPASSLLVVLI 97

Query: 164 ------SLSNPAFIGISRRDLNVRPAAFFF------IKCNL 192
                 SL N A+IG+ +  L  + +AFFF      +KC +
Sbjct: 98  LISCPFSLLNWAWIGL-KSQLE-QESAFFFNIHILRMKCTM 136