Miyakogusa Predicted Gene

Lj3g3v3188600.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3188600.1 Non Chatacterized Hit- tr|C5Y8K0|C5Y8K0_SORBI
Putative uncharacterized protein Sb05g027610
OS=Sorghu,49.08,1e-18,seg,NULL,CUFF.45405.1
         (297 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g04440.1                                                       245   4e-65
Glyma18g52620.1                                                       134   9e-32
Glyma02g10300.1                                                       107   1e-23

>Glyma15g04440.1 
          Length = 300

 Score =  245 bits (626), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 156/311 (50%), Positives = 181/311 (58%), Gaps = 25/311 (8%)

Query: 1   MSLSGLVIALSVAFGCFXXXXXXXXXXXXWWKKRRXXXXXXXXDHSNDAKGLLNGVCWKA 60
           MS  GL IALS+ FGC             WWKKRR        D   DAKG     CWK 
Sbjct: 1   MSFGGLSIALSLVFGCLLLALCAQLYYFLWWKKRRTQM-----DIEMDAKGAFYWGCWKT 55

Query: 61  P-------STTNSVTVRSSEPENKSHEPDLELGKDVVGLKNFGEEG-VECELMRLHNLAG 112
           P       +T      R  E    S EP++EL  D++  K FGEEG VE ELMRLHNLAG
Sbjct: 56  PCAMHVANNTGRGGVNRDIERTTTSREPEMEL--DLLH-KPFGEEGTVESELMRLHNLAG 112

Query: 113 PPRFLFTIXXXXXXXXXXXXGRSRKGSRTRSLSDIMVATIDSPFLNPVASSPLKCS---L 169
           PPRFLF I             RSRKGSRTRSLSD+M+ TID+PFL PVASSPLKC    L
Sbjct: 113 PPRFLFPIKEETKEDLESE-DRSRKGSRTRSLSDLML-TIDTPFLTPVASSPLKCCSLPL 170

Query: 170 DGLDSFKHQGFNPLFESSMESELNRFRSNSPPPKFKFLRDAEEKLYRRLIEEAQRKAKAN 229
           D L S+KHQGFNPLFESS+E E NRFRS SPPPKFKF+RDAEEKL+R+L+EEA+RKA  N
Sbjct: 171 DPLHSYKHQGFNPLFESSVELEYNRFRS-SPPPKFKFMRDAEEKLHRKLMEEARRKAVDN 229

Query: 230 GSVAESEAKGLPNSISVTDNSNRSLLRFVNNKEREQVKXXXXXXXXXXXXX---XXXXTT 286
            +V E   K   N    TD  + S L+F+   E +Q +                    TT
Sbjct: 230 NNVQECGVKDCSNETLATDFRDGSFLKFIQTTEHKQPQQYLPQFPSGSSQILPLASSPTT 289

Query: 287 FKPVEKASMVH 297
            +P+EKAS+VH
Sbjct: 290 LRPLEKASIVH 300


>Glyma18g52620.1 
          Length = 283

 Score =  134 bits (338), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 90/248 (36%), Positives = 125/248 (50%), Gaps = 27/248 (10%)

Query: 2   SLSGLVIALSVAFGCFXXXXXXXXXXXXWWKKRRXXXXXXXXDHSNDAKGLLNGVCWKAP 61
           SLS + + LS+ FGC             WWKKR         ++ N  K L    CWK P
Sbjct: 3   SLSSVGLGLSIIFGCLLLALVAEVYYLLWWKKR-ITNREIENNYGNPVKELFYMFCWKRP 61

Query: 62  STTNSVTVRSSEPENKS---------HEPDL---ELGKDVVGLKNFGEEGVECELMRLHN 109
           S+++      + PE  S         H P+    + GKD V  K FGE+G++ E M   +
Sbjct: 62  SSSSLRQTSFTPPELCSSMRIGDTLVHNPEQVQSQSGKDFV-FKPFGEDGMDAEYMSQQD 120

Query: 110 LAGPPRFLFTIXXXXXXXXXXXXG-----RSRKGSRTRSLSDIMVATIDSPFL--NPVAS 162
           L GPPRFLFTI            G     +S KGSR RSL D++V  +++P++       
Sbjct: 121 LLGPPRFLFTIVEESKEDLESDDGKFKCDKSGKGSRGRSLGDLLV--VETPYMTPTTSPP 178

Query: 163 SPLKCSLDGLDSFKHQGFNPLFESSMESELNRFRSNSPPPKFKFLRDAEEKLYRRLIEEA 222
                    +  +  +GFNPLFE++ ++E NR +S SPPPKFKFL++AEEKL R+L    
Sbjct: 179 FFTPPFTTPISPYNQRGFNPLFETATDAEFNRLKS-SPPPKFKFLQEAEEKLRRKL---Q 234

Query: 223 QRKAKANG 230
           Q + K NG
Sbjct: 235 QDENKGNG 242


>Glyma02g10300.1 
          Length = 231

 Score =  107 bits (268), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 76/195 (38%), Positives = 110/195 (56%), Gaps = 28/195 (14%)

Query: 57  CWKAPSTTNSVTVRSSEPENKS---------HEPDL---ELGKDVVGLKNFGEEGVECEL 104
           CWK PS+++      + PE  S         H+P+    + GK+ V  K FGE+G + E 
Sbjct: 3   CWKRPSSSSLRQTSFTPPEFCSSMRIGDTLVHDPEQVQSQSGKEFV-FKPFGEDGTDAEY 61

Query: 105 MRLHNLA--GPPRFLFTIXXXXXXXXXXXXGRSR-----KGSRTRSLSDIMVATIDSPFL 157
           MR  +L   GPPRFLFTI            G+S+     KGSR RSL D++V  +++P++
Sbjct: 62  MRQQDLLLLGPPRFLFTIVEESKEDLESDDGKSKCDKSGKGSRGRSLGDLLV--VETPYM 119

Query: 158 NPVASSPLKCSLDG--LDSFKHQGFNPLFESSMESELNRFRSNSPPPKFKFLRDAEEKLY 215
            P  S P         +  +  +GFNPLFE++ ++E N+ +S SPPPKFKFL++AEEKL 
Sbjct: 120 TPTTSPPFFTPPFTTPISPYNQRGFNPLFETATDAEFNKLKS-SPPPKFKFLQEAEEKLR 178

Query: 216 RRLIEEAQRKAKANG 230
           R+L E+   + K NG
Sbjct: 179 RKLQED---ENKGNG 190