Miyakogusa Predicted Gene

Lj3g3v3165180.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3165180.1 Non Chatacterized Hit- tr|I1IJ83|I1IJ83_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,43.01,0.0000000000002,UNCHARACTERIZED,Harbinger
transposase-derived nuclease; DDE_4,NULL,CUFF.45365.1
         (388 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g23150.2                                                       388   e-108
Glyma02g14360.1                                                        71   2e-12
Glyma09g30520.1                                                        67   4e-11
Glyma18g24960.1                                                        50   5e-06

>Glyma20g23150.2 
          Length = 402

 Score =  388 bits (996), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 198/361 (54%), Positives = 246/361 (68%), Gaps = 13/361 (3%)

Query: 30  LDWSDEFSEKING---RHQNTPT--SVFKITKSMFDYICSLVEEDMMEKPPHLAFTNGQP 84
            DW   FS +I+G   R +N     SVFKI++  F+YICSLVEEDM+ +  +    NG  
Sbjct: 43  FDWWHHFSLRISGPLARSKNIEKFESVFKISRKTFNYICSLVEEDMLARASNFVDLNGNR 102

Query: 85  VSLHDQVAVALRRLGSGDSLVLIGGIFGVSNTMVSQITWKFVESMENRGLLHLKWPPTER 144
           +SL+DQVAVALRRL SG+SL  IG  F ++ + VSQ+TWKFVE+ME RGL HL W  TE 
Sbjct: 103 LSLNDQVAVALRRLSSGESLSTIGESFRMNQSTVSQVTWKFVETMEERGLHHLSWASTEM 162

Query: 145 ELIEIKSKFGKLQSLPNCCGVVDVTHINMCLASTEPNKDVWLDHENKHSMVLQAIVDPDM 204
           E+ EIKSKF  ++ L NCCG VD THI M L S +    VWLD E   SMVLQAIVDPD+
Sbjct: 163 EMEEIKSKFENIRGLSNCCGAVDSTHIMMTLPSVDALNSVWLDREKNCSMVLQAIVDPDL 222

Query: 205 RFRDIVTGWPGQMKDWMVFEDSTFHKLCDEGERLNGNIIRLPDGSEIREYIIGDSGYPLL 264
           RFRDIVTGWPG M D  V   S+F KL +EG+RLNG    LPDG+  REYIIGD+G+PL 
Sbjct: 223 RFRDIVTGWPGSMSDEQVLRSSSFFKLAEEGKRLNGGKKTLPDGTLFREYIIGDTGFPLF 282

Query: 265 PYLIVPYKGEEQELSVSQANFNRRHLETRMVAKRALVMLKEMWGIIQGTMWRPNKHRLSK 324
            +L+ PY+G  +  S  Q  FN+R +ET+MVAK+AL  LK+MW IIQG MW+P+KH+L +
Sbjct: 283 SWLLTPYEG--KGFSNVQVEFNKRVVETQMVAKKALARLKDMWKIIQGVMWKPDKHKLPR 340

Query: 325 VILVCCILHNIVIDMGDRVQNEQLSNLPT--NHDPGYHQLICEAEDPQGVLLRENVSRYL 382
           +ILVCCILHNIVIDM D V    L ++P+   HD  Y     E  D    ++RE +S YL
Sbjct: 341 IILVCCILHNIVIDMEDEV----LIDMPSCHQHDSRYQDQTSEFADNTATIMREKLSLYL 396

Query: 383 S 383
           S
Sbjct: 397 S 397


>Glyma02g14360.1 
          Length = 701

 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/267 (25%), Positives = 126/267 (47%), Gaps = 37/267 (13%)

Query: 86  SLHDQVAVALRRLGSGDSLVLIGGIFGVSNTMVSQ---ITWKFVESMENRGLLHLKWPPT 142
           ++ +QVA  L  +G       +   F  S   VS+      + + S+E+  L+     P+
Sbjct: 26  TVEEQVAKFLHIIGHNVKNRTVSFFFRRSGETVSRHFHNVLRAIISLEDEFLVQ----PS 81

Query: 143 EREL---IEIKSKFGKLQSLPNCCGVVDVTHINMCLASTEPNKDVWLDHENKHSMVLQAI 199
            R++   I   S+F       +C G +D THI + +   E  +  +   ++  +  + A 
Sbjct: 82  GRDVPPQILNNSRFYPF--FKDCIGAIDGTHIRVKVPRAEAAR--FRGRKDYPTQNVLAA 137

Query: 200 VDPDMRFRDIVTGWPGQMKDWMVFEDSTFHKLCDEGERLNGNIIRLPDGSEIREYIIGDS 259
            + DM+F  ++ GW G   D  + +D+    L  E      + +++P+G    +Y +GD+
Sbjct: 138 CNFDMKFTYVLPGWEGTASDSRILKDA----LSRE------DSLKIPEG----KYYLGDA 183

Query: 260 GYPLLPYLIVPYKGEE---QELSV-----SQANFNRRHLETRMVAKRALVMLKEMWGIIQ 311
           G+ L   ++ PY+G     +E S+     S+  FN RH   R V +R   +LK+ + I+ 
Sbjct: 184 GFMLKRGVLTPYRGVRYHLKEYSIRSPQNSKELFNHRHASLRNVIERCFGVLKKRFPILS 243

Query: 312 -GTMWRPNKHRLSKVILVCCILHNIVI 337
            GT    +   ++ ++L CCILHN ++
Sbjct: 244 TGTEPFYSFEVMTDIVLACCILHNFLM 270


>Glyma09g30520.1 
          Length = 392

 Score = 67.0 bits (162), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 68/297 (22%), Positives = 125/297 (42%), Gaps = 40/297 (13%)

Query: 52  FKITKSMFDYICSLVEEDMMEKPPHLAFTNGQPVSLHDQVAVALRRLGSGDSLVLIGGIF 111
           F++ K +F  +C     D+++    L  TN   + + +Q+ + +  +G       +  +F
Sbjct: 46  FRMDKHVFYKLC-----DILQAKGLLRHTNR--IKIEEQLGIFMFIIGHNLRTRAVQELF 98

Query: 112 GVSNTMVSQITWKFVESMENRGLLHLKWPPTERELIEIKSKFGKLQSLPNCCGVVDVTHI 171
             S   +S+     + ++ +  L  L  PP      EI           +C GV+D  H+
Sbjct: 99  RYSGETISRHFNNVLNAIMSISL-DLFQPPGSGVPSEIIEDPRFYPYFKDCVGVIDGIHV 157

Query: 172 NMCLASTEPNKDVWLDHENKHSMVLQAIVDP---DMRFRDIVTGWPGQMKDWMVFEDSTF 228
            + +   E          NK+ ++ Q I+     D++F  ++ GW G   D +VF  +  
Sbjct: 158 PVTVGVDEQGP-----FRNKNGLLSQNILAACSFDLKFHYVLAGWEGSATDLLVFNSAIT 212

Query: 229 HKLCDEGERLNGNIIRLPDGSEIREYIIGDSGYPLLPYLIVPYKG----EEQELSVSQAN 284
            +          N +++P+G    +Y I DS YP +P  I PY       ++ LS     
Sbjct: 213 RR----------NKLQVPEG----KYYIVDSKYPNVPGFIAPYSSTPYYSKEFLSDYHPQ 258

Query: 285 -----FNRRHLETRMVAKRALVMLKEMWGIIQGTMWRPNKHRLSKVILVCCILHNIV 336
                FN+RH   R V  R   +LK  + I+      P + ++ K+++  C LHN +
Sbjct: 259 DAGELFNQRHSLLRHVTDRTFGILKARFPILMSAPSYPLQTQV-KLVVAACALHNYI 314


>Glyma18g24960.1 
          Length = 604

 Score = 50.1 bits (118), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 37/155 (23%), Positives = 66/155 (42%), Gaps = 24/155 (15%)

Query: 154 GKLQSLPNCCGVVDVTHINMCLASTEPNKDVWLDHENKHSMVLQAIVDPDMRFRDIVTGW 213
            K +   N  G +D  HI + +++ +  +  + + +   S  +  +  PD+RF  ++ GW
Sbjct: 173 NKWRWFKNSIGALDGIHIPVTVSAEDRPR--YRNRKGDISTNVLGVCGPDLRFIYVLPGW 230

Query: 214 PGQMKDWMVFEDSTFHKLCDEGERLNGNIIRLPDGSEIREYIIGDSGYPLLPYLIVPYKG 273
            G   D  V  D+   + C          + +P+G    +Y + D+GY   P  + PY+G
Sbjct: 231 EGSAGDSRVLRDALHRQNC----------LHIPNG----KYFLVDAGYTNGPGFLAPYRG 276

Query: 274 EEQELSVSQAN--------FNRRHLETRMVAKRAL 300
               L+    N        FN RH   R V +R +
Sbjct: 277 TRYHLNEWIENTPKKYKELFNLRHASARNVIEREM 311