Miyakogusa Predicted Gene
- Lj3g3v3118700.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v3118700.1 Non Chatacterized Hit- tr|I1KDR3|I1KDR3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.16337
PE,84.75,5e-19,Proteasom_PSMB,26S proteasome non-ATPase regulatory
subunit 5; 26S PROTEASOME NON-ATPASE REGULATORY ,CUFF.45329.1
(132 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma06g35680.2 235 8e-63
Glyma06g35680.3 235 1e-62
Glyma06g35680.1 235 1e-62
Glyma12g26500.1 170 5e-43
Glyma06g35680.4 102 1e-22
>Glyma06g35680.2
Length = 416
Score = 235 bits (600), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 114/134 (85%), Positives = 122/134 (91%), Gaps = 2/134 (1%)
Query: 1 MDDPSQLLQAATDFANYPGVQSDDSARDFLNRFPLPLIINALQTQVDVPGLENTLVACLE 60
MDD SQLLQAA+DF +YPG SDDS+RDFLNRFPLP+IINALQTQ+DVPGLENTLVACLE
Sbjct: 1 MDDSSQLLQAASDFVHYPGPHSDDSSRDFLNRFPLPVIINALQTQLDVPGLENTLVACLE 60
Query: 61 SIFKTKLGASLIPQYMPFVQVGLQADSQAVRSLACKTVTCLLDNLDNDHKVAAH--LIAE 118
+F TKLGASLIPQYMPFVQVGLQADSQAVRSLACKTVT LL+NLDNDHKVAA LI +
Sbjct: 61 RLFNTKLGASLIPQYMPFVQVGLQADSQAVRSLACKTVTSLLENLDNDHKVAASACLIKD 120
Query: 119 FNIYPLLLDCLIKG 132
FNIYPLLLDCLI G
Sbjct: 121 FNIYPLLLDCLING 134
>Glyma06g35680.3
Length = 523
Score = 235 bits (599), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 114/134 (85%), Positives = 122/134 (91%), Gaps = 2/134 (1%)
Query: 1 MDDPSQLLQAATDFANYPGVQSDDSARDFLNRFPLPLIINALQTQVDVPGLENTLVACLE 60
MDD SQLLQAA+DF +YPG SDDS+RDFLNRFPLP+IINALQTQ+DVPGLENTLVACLE
Sbjct: 1 MDDSSQLLQAASDFVHYPGPHSDDSSRDFLNRFPLPVIINALQTQLDVPGLENTLVACLE 60
Query: 61 SIFKTKLGASLIPQYMPFVQVGLQADSQAVRSLACKTVTCLLDNLDNDHKVAAH--LIAE 118
+F TKLGASLIPQYMPFVQVGLQADSQAVRSLACKTVT LL+NLDNDHKVAA LI +
Sbjct: 61 RLFNTKLGASLIPQYMPFVQVGLQADSQAVRSLACKTVTSLLENLDNDHKVAASACLIKD 120
Query: 119 FNIYPLLLDCLIKG 132
FNIYPLLLDCLI G
Sbjct: 121 FNIYPLLLDCLING 134
>Glyma06g35680.1
Length = 525
Score = 235 bits (599), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 114/134 (85%), Positives = 122/134 (91%), Gaps = 2/134 (1%)
Query: 1 MDDPSQLLQAATDFANYPGVQSDDSARDFLNRFPLPLIINALQTQVDVPGLENTLVACLE 60
MDD SQLLQAA+DF +YPG SDDS+RDFLNRFPLP+IINALQTQ+DVPGLENTLVACLE
Sbjct: 1 MDDSSQLLQAASDFVHYPGPHSDDSSRDFLNRFPLPVIINALQTQLDVPGLENTLVACLE 60
Query: 61 SIFKTKLGASLIPQYMPFVQVGLQADSQAVRSLACKTVTCLLDNLDNDHKVAAH--LIAE 118
+F TKLGASLIPQYMPFVQVGLQADSQAVRSLACKTVT LL+NLDNDHKVAA LI +
Sbjct: 61 RLFNTKLGASLIPQYMPFVQVGLQADSQAVRSLACKTVTSLLENLDNDHKVAASACLIKD 120
Query: 119 FNIYPLLLDCLIKG 132
FNIYPLLLDCLI G
Sbjct: 121 FNIYPLLLDCLING 134
>Glyma12g26500.1
Length = 114
Score = 170 bits (430), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 82/98 (83%), Positives = 88/98 (89%)
Query: 1 MDDPSQLLQAATDFANYPGVQSDDSARDFLNRFPLPLIINALQTQVDVPGLENTLVACLE 60
M D SQLL+AA+DFA+Y G SDDSARDFLNRFPLP+I +ALQTQ DVPGLENTLV CLE
Sbjct: 1 MVDSSQLLEAASDFAHYTGAHSDDSARDFLNRFPLPVIFSALQTQFDVPGLENTLVTCLE 60
Query: 61 SIFKTKLGASLIPQYMPFVQVGLQADSQAVRSLACKTV 98
+F TKLGASLIPQYMPFVQVGLQADSQAVRSLACKTV
Sbjct: 61 RLFNTKLGASLIPQYMPFVQVGLQADSQAVRSLACKTV 98
>Glyma06g35680.4
Length = 450
Score = 102 bits (253), Expect = 1e-22, Method: Composition-based stats.
Identities = 51/59 (86%), Positives = 53/59 (89%), Gaps = 2/59 (3%)
Query: 76 MPFVQVGLQADSQAVRSLACKTVTCLLDNLDNDHKVAAH--LIAEFNIYPLLLDCLIKG 132
MPFVQVGLQADSQAVRSLACKTVT LL+NLDNDHKVAA LI +FNIYPLLLDCLI G
Sbjct: 1 MPFVQVGLQADSQAVRSLACKTVTSLLENLDNDHKVAASACLIKDFNIYPLLLDCLING 59