Miyakogusa Predicted Gene

Lj3g3v3087290.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3087290.1 tr|B9H6B7|B9H6B7_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_760413 PE=4
SV=1,30.5,5e-17,seg,NULL; coiled-coil,NULL,CUFF.45298.1
         (1113 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g07760.1                                                        55   4e-07

>Glyma12g07760.1 
          Length = 85

 Score = 55.1 bits (131), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 30/44 (68%), Positives = 32/44 (72%), Gaps = 4/44 (9%)

Query: 1  MISGTATP----NMEVIQEEEPVATSLALQQIEENLFKHSSDGV 40
          MISGTATP    N+EVI EEE V  S+ LQ IEENLF HSSD V
Sbjct: 41 MISGTATPKAGLNLEVIHEEECVGNSIELQDIEENLFMHSSDAV 84