Miyakogusa Predicted Gene
- Lj3g3v3085860.3
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v3085860.3 Non Chatacterized Hit- tr|K3Y7Q4|K3Y7Q4_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si009962,62.86,7e-19,seg,NULL; PREDICTED PROTEIN (FRAGMENT),NULL;
MEMBRANE ASSOCIATED RING FINGER,NULL,CUFF.45283.3
(139 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma12g07290.1 216 4e-57
Glyma12g07290.2 216 7e-57
Glyma11g20650.1 213 7e-56
Glyma13g20250.1 164 3e-41
Glyma13g40150.1 151 2e-37
Glyma03g33750.1 144 2e-35
Glyma19g36490.1 142 8e-35
Glyma13g10860.4 128 2e-30
Glyma13g10860.1 128 2e-30
Glyma14g00560.1 121 2e-28
Glyma02g48010.1 119 7e-28
Glyma10g05910.1 97 4e-21
Glyma13g10860.2 91 3e-19
Glyma15g10590.1 81 3e-16
Glyma05g21460.1 67 8e-12
Glyma12g29600.1 56 1e-08
Glyma13g28490.1 55 2e-08
>Glyma12g07290.1
Length = 514
Score = 216 bits (551), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 115/150 (76%), Positives = 118/150 (78%), Gaps = 13/150 (8%)
Query: 1 MLAYFCFLEQLLVSKMGTGAIAISLPFSCVLGXXXXXXXXXXVKSRFIWIYASVQFALVV 60
MLAYFCFLEQLLV KMGTGAIAISLPFSCVLG VKSRFIWIYAS QFALVV
Sbjct: 363 MLAYFCFLEQLLVGKMGTGAIAISLPFSCVLGLLSSMTSSTMVKSRFIWIYASAQFALVV 422
Query: 61 LFAHIFYSVVHVQAVLSILLATFAGFGVVMCGSSILVEVFRWRRRWQALSEQQQLHG--- 117
LFAHIFYSVVHVQAVLSILLATFAGFGVVM GSSILVE FRWRRR QAL EQQ HG
Sbjct: 423 LFAHIFYSVVHVQAVLSILLATFAGFGVVMSGSSILVEFFRWRRRVQALQEQQ--HGPAA 480
Query: 118 --PQTANTPRSGSV------TQPVVQNQQN 139
P+T NTPR GS +QPVVQ+QQN
Sbjct: 481 QNPRTPNTPRPGSGSGPSNHSQPVVQSQQN 510
>Glyma12g07290.2
Length = 480
Score = 216 bits (549), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 115/150 (76%), Positives = 118/150 (78%), Gaps = 13/150 (8%)
Query: 1 MLAYFCFLEQLLVSKMGTGAIAISLPFSCVLGXXXXXXXXXXVKSRFIWIYASVQFALVV 60
MLAYFCFLEQLLV KMGTGAIAISLPFSCVLG VKSRFIWIYAS QFALVV
Sbjct: 329 MLAYFCFLEQLLVGKMGTGAIAISLPFSCVLGLLSSMTSSTMVKSRFIWIYASAQFALVV 388
Query: 61 LFAHIFYSVVHVQAVLSILLATFAGFGVVMCGSSILVEVFRWRRRWQALSEQQQLHG--- 117
LFAHIFYSVVHVQAVLSILLATFAGFGVVM GSSILVE FRWRRR QAL EQQ HG
Sbjct: 389 LFAHIFYSVVHVQAVLSILLATFAGFGVVMSGSSILVEFFRWRRRVQALQEQQ--HGPAA 446
Query: 118 --PQTANTPRSGSV------TQPVVQNQQN 139
P+T NTPR GS +QPVVQ+QQN
Sbjct: 447 QNPRTPNTPRPGSGSGPSNHSQPVVQSQQN 476
>Glyma11g20650.1
Length = 523
Score = 213 bits (541), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 114/159 (71%), Positives = 118/159 (74%), Gaps = 22/159 (13%)
Query: 1 MLAYFCFLEQLLVSKMGTGAIAISLPFSCVLGXXXXXXXXXXVKSRFIWIYASVQFALVV 60
MLAYFCFLEQLLV KMGTGAIAISLPFSCVLG VKSRFIWIYASVQFALVV
Sbjct: 363 MLAYFCFLEQLLVGKMGTGAIAISLPFSCVLGLLSSMTSSTMVKSRFIWIYASVQFALVV 422
Query: 61 LFAHIFYSVVHVQAVLSILLATFAGFGVVMCGSSILVEVFRWRRRWQALSEQQQLHG--- 117
LFAHIFYSVVHVQAVLSILLATFAGFGVVM GSSILVE FRWRRR QALSEQ+ HG
Sbjct: 423 LFAHIFYSVVHVQAVLSILLATFAGFGVVMSGSSILVEYFRWRRRVQALSEQR--HGPQL 480
Query: 118 -PQTANTPRSGSV----------------TQPVVQNQQN 139
PQ PR+ +V +QPVVQNQQN
Sbjct: 481 MPQAGQNPRTSNVQRPGPGSGSGLAPSNHSQPVVQNQQN 519
>Glyma13g20250.1
Length = 508
Score = 164 bits (415), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 84/141 (59%), Positives = 102/141 (72%), Gaps = 5/141 (3%)
Query: 1 MLAYFCFLEQLLVSKMGTGAIAISLPFSCVLGXXXXXXXXXXVKSRFIWIYASVQFALVV 60
MLAYFCFLEQLLVS MG+GAIA+SLPFSC+LG V+ +WIYA+VQF LVV
Sbjct: 343 MLAYFCFLEQLLVSNMGSGAIAMSLPFSCILGLLASMTATTMVRRNHVWIYATVQFCLVV 402
Query: 61 LFAHIFYSVVHVQAVLSILLATFAGFGVVMCGSSILVEVFRWRRRWQALSEQQQLHGPQT 120
L H+F+S+VH+QAVL+ILLATF GFGVVMCG+SIL+E+ +WR R A S QQQ G Q
Sbjct: 403 LAGHLFFSLVHMQAVLAILLATFTGFGVVMCGASILMEILKWRGRSLAQSNQQQ--GSQE 460
Query: 121 ANTPRSGSVT---QPVVQNQQ 138
A P S T QP + ++Q
Sbjct: 461 AIPPPDQSSTVAHQPQIGSEQ 481
>Glyma13g40150.1
Length = 471
Score = 151 bits (382), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 77/108 (71%), Positives = 83/108 (76%), Gaps = 2/108 (1%)
Query: 1 MLAYFCFLEQLLVSKMGTGAIAISLPFSCVLGXXXXXXXXXXVKSRFIWIYASVQFALVV 60
MLAYFCFLEQLLV +M T AI ISLPF+CVLG RFIWIYASVQF LVV
Sbjct: 353 MLAYFCFLEQLLVGRMRTKAIFISLPFACVLGLLSSVTSSTM--GRFIWIYASVQFVLVV 410
Query: 61 LFAHIFYSVVHVQAVLSILLATFAGFGVVMCGSSILVEVFRWRRRWQA 108
+FAHIFY +V AVL+ILLATFAGFGVVM GSSIL+E RWRRRWQA
Sbjct: 411 IFAHIFYPLVGKHAVLAILLATFAGFGVVMSGSSILLESSRWRRRWQA 458
>Glyma03g33750.1
Length = 436
Score = 144 bits (363), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 66/106 (62%), Positives = 79/106 (74%)
Query: 1 MLAYFCFLEQLLVSKMGTGAIAISLPFSCVLGXXXXXXXXXXVKSRFIWIYASVQFALVV 60
MLAYFCFLEQLLVS MG+GA+AISLPFSC+LG V +W+YA QF +VV
Sbjct: 321 MLAYFCFLEQLLVSSMGSGAVAISLPFSCILGLLASMTSTIMVTCEHVWVYAIAQFVMVV 380
Query: 61 LFAHIFYSVVHVQAVLSILLATFAGFGVVMCGSSILVEVFRWRRRW 106
L +FYS+++ QAVLSILLATF GFG VMCG+ IL+E +WRRRW
Sbjct: 381 LAGRLFYSLLNKQAVLSILLATFTGFGAVMCGAYILIEFLKWRRRW 426
>Glyma19g36490.1
Length = 414
Score = 142 bits (359), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 65/106 (61%), Positives = 79/106 (74%)
Query: 1 MLAYFCFLEQLLVSKMGTGAIAISLPFSCVLGXXXXXXXXXXVKSRFIWIYASVQFALVV 60
MLAYFCFLEQLLVS MG+GA+AISLPFSC+LG V +W+YA QF +VV
Sbjct: 299 MLAYFCFLEQLLVSSMGSGAVAISLPFSCILGLLASMTSTIMVTCEHVWVYAIAQFVMVV 358
Query: 61 LFAHIFYSVVHVQAVLSILLATFAGFGVVMCGSSILVEVFRWRRRW 106
L +FYS+++ +AVLSILLATF GFG VMCG+ IL+E +WRRRW
Sbjct: 359 LAGRLFYSLLNKEAVLSILLATFTGFGAVMCGAYILIEFLKWRRRW 404
>Glyma13g10860.4
Length = 373
Score = 128 bits (321), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 57/105 (54%), Positives = 79/105 (75%)
Query: 1 MLAYFCFLEQLLVSKMGTGAIAISLPFSCVLGXXXXXXXXXXVKSRFIWIYASVQFALVV 60
MLAYFCFLE+LLVS +GT A+AISLPFSCVLG V ++W YA QFA+V+
Sbjct: 260 MLAYFCFLEELLVSVLGTRALAISLPFSCVLGLLSSMIASTMVSGSYMWAYACFQFAIVI 319
Query: 61 LFAHIFYSVVHVQAVLSILLATFAGFGVVMCGSSILVEVFRWRRR 105
LFAH+FY++++V A+LS+LL++F GFG+ + +++L+E RWR R
Sbjct: 320 LFAHVFYTILNVNAILSVLLSSFTGFGIAISLNTLLMEYVRWRTR 364
>Glyma13g10860.1
Length = 373
Score = 128 bits (321), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 57/105 (54%), Positives = 79/105 (75%)
Query: 1 MLAYFCFLEQLLVSKMGTGAIAISLPFSCVLGXXXXXXXXXXVKSRFIWIYASVQFALVV 60
MLAYFCFLE+LLVS +GT A+AISLPFSCVLG V ++W YA QFA+V+
Sbjct: 260 MLAYFCFLEELLVSVLGTRALAISLPFSCVLGLLSSMIASTMVSGSYMWAYACFQFAIVI 319
Query: 61 LFAHIFYSVVHVQAVLSILLATFAGFGVVMCGSSILVEVFRWRRR 105
LFAH+FY++++V A+LS+LL++F GFG+ + +++L+E RWR R
Sbjct: 320 LFAHVFYTILNVNAILSVLLSSFTGFGIAISLNTLLMEYVRWRTR 364
>Glyma14g00560.1
Length = 503
Score = 121 bits (303), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 57/110 (51%), Positives = 75/110 (68%)
Query: 1 MLAYFCFLEQLLVSKMGTGAIAISLPFSCVLGXXXXXXXXXXVKSRFIWIYASVQFALVV 60
MLAYFCFLEQLLVS +G A+AISLPFSCVLG V F+W YA QFA ++
Sbjct: 351 MLAYFCFLEQLLVSDLGPRALAISLPFSCVLGLLSSMIASTMVSRSFVWAYACFQFATLI 410
Query: 61 LFAHIFYSVVHVQAVLSILLATFAGFGVVMCGSSILVEVFRWRRRWQALS 110
L AH+FY++++ A+LSILL+TF GFG+ + +S+++E WR Q S
Sbjct: 411 LLAHVFYTILNFNAILSILLSTFTGFGIAISMNSLVMEFIGWRTSRQVQS 460
>Glyma02g48010.1
Length = 409
Score = 119 bits (299), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 58/122 (47%), Positives = 84/122 (68%), Gaps = 6/122 (4%)
Query: 1 MLAYFCFLEQLLVSKMGTGAIAISLPFSCVLGXXXXXXXXXXVKSRFIWIYASVQFALVV 60
ML+YFCFLEQLLVS +G+ A+AISLPFSCVLG V F+W YA QFA+++
Sbjct: 257 MLSYFCFLEQLLVSDLGSHALAISLPFSCVLGLLSSMIASTMVSRSFVWAYACFQFAILI 316
Query: 61 LFAHIFYSVVHVQAVLSILLATFAGFGVVMCGSSILVEVFRWR--RRWQA----LSEQQQ 114
L +H+FY++++ A+LSILL++F GFG+ + +S+++E WR RR Q+ ++ QQ
Sbjct: 317 LLSHVFYTILNFNAILSILLSSFTGFGIAVSMNSLIMEFIGWRTSRRVQSSIENVNRTQQ 376
Query: 115 LH 116
H
Sbjct: 377 QH 378
>Glyma10g05910.1
Length = 454
Score = 97.4 bits (241), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/132 (44%), Positives = 72/132 (54%), Gaps = 9/132 (6%)
Query: 1 MLAYFCFLEQLLVSKMGTGAIAISLPFSCVLGXXXXXXXXXXVKSRFIWIYASVQFALVV 60
MLAYF F VS MG+G I L FSCVLG V+ +WIYA+VQF LV
Sbjct: 310 MLAYFWFH----VSNMGSGTIVHCLAFSCVLGSLASFTATVMVRRNHVWIYATVQFCLVF 365
Query: 61 LFAHIFYSVVHVQAVLSILLATFAGFGVVMCGSSILVEVFRWRRRWQALSEQQQLHGPQT 120
L H+F+S+ H + ++ T G VVMCG+ IL E+ +WR R A S QQQ G Q
Sbjct: 366 LIEHLFFSLFHRSNIDAV---TCTGMAVVMCGNFILTEILKWRGRSLAQSNQQQ--GSQE 420
Query: 121 ANTPRSGSVTQP 132
A P S T P
Sbjct: 421 AVPPPDQSSTIP 432
>Glyma13g10860.2
Length = 342
Score = 91.3 bits (225), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 41/69 (59%), Positives = 51/69 (73%)
Query: 1 MLAYFCFLEQLLVSKMGTGAIAISLPFSCVLGXXXXXXXXXXVKSRFIWIYASVQFALVV 60
MLAYFCFLE+LLVS +GT A+AISLPFSCVLG V ++W YA QFA+V+
Sbjct: 260 MLAYFCFLEELLVSVLGTRALAISLPFSCVLGLLSSMIASTMVSGSYMWAYACFQFAIVI 319
Query: 61 LFAHIFYSV 69
LFAH+FY++
Sbjct: 320 LFAHVFYTI 328
>Glyma15g10590.1
Length = 422
Score = 80.9 bits (198), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 62/102 (60%)
Query: 2 LAYFCFLEQLLVSKMGTGAIAISLPFSCVLGXXXXXXXXXXVKSRFIWIYASVQFALVVL 61
+ YF FLEQLL+ ++ T AI I+ PF+ LG +IW YA+++FALV L
Sbjct: 311 ICYFFFLEQLLLPELKTQAIIIAAPFAFTLGLLASIFAVILAIKEYIWTYAALEFALVAL 370
Query: 62 FAHIFYSVVHVQAVLSILLATFAGFGVVMCGSSILVEVFRWR 103
H+FY+++H+ A+ +ILL++ GFG+ M + ++ WR
Sbjct: 371 TVHLFYTMLHLTAIYAILLSSVLGFGIAMGINYAYIQFVTWR 412
>Glyma05g21460.1
Length = 163
Score = 66.6 bits (161), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 33/43 (76%), Positives = 35/43 (81%)
Query: 63 AHIFYSVVHVQAVLSILLATFAGFGVVMCGSSILVEVFRWRRR 105
H+ VHVQAVLSILLATF GFGVVM GSSILVE FRWR+R
Sbjct: 120 CHVLVIHVHVQAVLSILLATFVGFGVVMSGSSILVEFFRWRKR 162
>Glyma12g29600.1
Length = 408
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/32 (78%), Positives = 27/32 (84%)
Query: 1 MLAYFCFLEQLLVSKMGTGAIAISLPFSCVLG 32
MLAYFCFLEQLLV +M T AI ISLPF+C LG
Sbjct: 359 MLAYFCFLEQLLVGRMRTKAIFISLPFACALG 390
>Glyma13g28490.1
Length = 70
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 40/59 (67%)
Query: 45 SRFIWIYASVQFALVVLFAHIFYSVVHVQAVLSILLATFAGFGVVMCGSSILVEVFRWR 103
+IW YA+++FALV L H+FY+++H+ A+ +ILL++ GFGV M + ++ WR
Sbjct: 2 KEYIWTYAALEFALVALTVHLFYTMLHLTAIYAILLSSVLGFGVAMGINYAYIQFVTWR 60