Miyakogusa Predicted Gene

Lj3g3v3085850.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3085850.1 Non Chatacterized Hit- tr|A5BSH1|A5BSH1_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,71.43,0.0000007,SUA5,NULL; no description,DHBP synthase RibB-like
alpha/beta domain; YrdC/RibB,DHBP synthase RibB-li,CUFF.45278.1
         (278 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g20640.1                                                       414   e-116
Glyma12g07280.1                                                       222   4e-58
Glyma19g25900.1                                                        62   5e-10
Glyma19g25900.2                                                        57   3e-08
Glyma19g25900.3                                                        57   3e-08
Glyma16g06090.1                                                        56   3e-08

>Glyma11g20640.1 
          Length = 290

 Score =  414 bits (1064), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 204/252 (80%), Positives = 222/252 (88%), Gaps = 6/252 (2%)

Query: 26  RRLALVPRLPQSQGLRRVLPKNVDWRMDSGDLGLEFKAGVVHPARDDYAAEAVEALKAGK 85
           RRL++ PRL   QGLR+   KN+   +   +         VHPA D YA EAVEALKAGK
Sbjct: 44  RRLSVFPRLQLCQGLRKGFSKNMACSVSVDN------CDTVHPATDAYAGEAVEALKAGK 97

Query: 86  VIAVPTDTLYGFACDACSLEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVTDHLPHGL 145
           VIAVPTDTLYGFACDACS+EAVNRIYEIKGR+HTSP+AICVGDVSDI RFAVTDHLPHGL
Sbjct: 98  VIAVPTDTLYGFACDACSMEAVNRIYEIKGRRHTSPVAICVGDVSDIARFAVTDHLPHGL 157

Query: 146 LDSLLPGPVTVVLKRGESSILEQSLNPGFDSIGVRVPDSNFIRVIARGSGTALALTSANL 205
           LDSLLPGPVTVVLKRG+SSILE+SLNPGFDSIGVRVPD NFIR+IARGSGTALALTSANL
Sbjct: 158 LDSLLPGPVTVVLKRGDSSILERSLNPGFDSIGVRVPDCNFIRIIARGSGTALALTSANL 217

Query: 206 SGQPSSVCIKDFEKLWEHCAFVFDGGLLPSGRAGSTVVDLTTPHKYKILRPGSAKEETVA 265
           SGQPSS+ IKDFE LWEHCAFV+DGGL+PS RAGST+VDLTTPHKY+ILRPGSAKEETVA
Sbjct: 218 SGQPSSLSIKDFENLWEHCAFVYDGGLIPSSRAGSTIVDLTTPHKYRILRPGSAKEETVA 277

Query: 266 ILEKHSFVEADT 277
           ILEKHSFVEA+T
Sbjct: 278 ILEKHSFVEAET 289


>Glyma12g07280.1 
          Length = 204

 Score =  222 bits (565), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 144/279 (51%), Positives = 159/279 (56%), Gaps = 78/279 (27%)

Query: 1   MNLSSQGKLLLNASLFPNFSFFPGVRRLALVPRLPQSQGLRRVLPKNVDWRM--DSGDLG 58
           MN+S+QG L+LNA    NFSF                +G RR   KN+   +  D+ D+ 
Sbjct: 1   MNVSTQGLLILNARFSSNFSF----------------RGPRRGFSKNMSCSVSVDNSDM- 43

Query: 59  LEFKAGVVHPARDDYAAEAVEALKAGKVIAVPTDTLYGFACDACSLEAVNRIYEIKGRKH 118
                  VHPA D YA EAVEALKAG                  SLEAVNRIYEIKGR+H
Sbjct: 44  -------VHPATDAYAGEAVEALKAG------------------SLEAVNRIYEIKGRRH 78

Query: 119 TSPLAICVGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLKRGESSILEQSLNPGFDSIG 178
           TSPLAICVGDVSDI RFAVTDHLPHGLLD LLPGPV VVLKR              D I 
Sbjct: 79  TSPLAICVGDVSDIARFAVTDHLPHGLLDCLLPGPVIVVLKR--------------DPIH 124

Query: 179 VRVPDSNFIRVIARGSGTALALTSANLSGQPSSVCIKDFEKLWEHCAFVFDGGLLPSGRA 238
             +    + R                    PS    K   K   + AFV+DGGL+PS  A
Sbjct: 125 CLIDHCLWFR------------------NCPSPYQCK--PKTSGNIAFVYDGGLIPSSLA 164

Query: 239 GSTVVDLTTPHKYKILRPGSAKEETVAILEKHSFVEADT 277
           GSTVVDLTTPHKYKILRPGSAKEETVAILEKHS VEA+T
Sbjct: 165 GSTVVDLTTPHKYKILRPGSAKEETVAILEKHSLVEAET 203


>Glyma19g25900.1 
          Length = 308

 Score = 62.4 bits (150), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 74/261 (28%), Positives = 106/261 (40%), Gaps = 34/261 (13%)

Query: 20  SFFPGVRRLALVPRLPQSQGLRRVLPKNVDWRMDSGDLGLEFKAGVVHPARDDYAAEAV- 78
           SF P  RR  LV  + +    R        +  + G + +E        A D +  E + 
Sbjct: 32  SFCPPRRRSGLVSMVAKRSPKRLKYTSASRFTKEDGLVYIEADPS----ASDSWKLEPIA 87

Query: 79  EALKAGKVIAVPTDTLYGFACDACSLEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVT 138
             LK G V  +PTDT+Y   CD  S  A+ R+  IK  + + PL+I      DI+++  T
Sbjct: 88  NLLKQGAVGVIPTDTMYAIVCDLRSQSAIERLRRIKNIEASKPLSILCHSFRDIDKY--T 145

Query: 139 DHLPHG----------LLDSLLPGPVTVVLKRGESSILEQSLNPGFDS--------IGVR 180
              P G           +   LPGP T +L      + +Q +  G  S        +GVR
Sbjct: 146 AGFPRGDGQGHANLFKAVKHYLPGPYTFILI-ASKELPKQCIRFGTSSAKYASRKNVGVR 204

Query: 181 VPDSNFIRVIARGSGTALALTSANLSGQPS----SVCIKDFEKLWEHCAFVFDGGLLPSG 236
           +PD    + I +     L  TS     +       V I D     E   FV DGG+  + 
Sbjct: 205 MPDDAICQAILKEMDAPLICTSIKFQKEDEWMIDPVMIADTYGP-EGLDFVVDGGVRVAD 263

Query: 237 RAGSTVVDLTTPHKYKILRPG 257
              STVVD+T     K+LR G
Sbjct: 264 --PSTVVDMTKLPP-KVLRQG 281


>Glyma19g25900.2 
          Length = 235

 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 81/201 (40%), Gaps = 26/201 (12%)

Query: 20  SFFPGVRRLALVPRLPQSQGLRRVLPKNVDWRMDSGDLGLEFKAGVVHPARDDYAAEAV- 78
           SF P  RR  LV  + +    R        +  + G + +E        A D +  E + 
Sbjct: 32  SFCPPRRRSGLVSMVAKRSPKRLKYTSASRFTKEDGLVYIEADPS----ASDSWKLEPIA 87

Query: 79  EALKAGKVIAVPTDTLYGFACDACSLEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVT 138
             LK G V  +PTDT+Y   CD  S  A+ R+  IK  + + PL+I      DI+++  T
Sbjct: 88  NLLKQGAVGVIPTDTMYAIVCDLRSQSAIERLRRIKNIEASKPLSILCHSFRDIDKY--T 145

Query: 139 DHLPHG----------LLDSLLPGPVTVVLKRGESSILEQSLNPGFDS--------IGVR 180
              P G           +   LPGP T +L      + +Q +  G  S        +GVR
Sbjct: 146 AGFPRGDGQGHANLFKAVKHYLPGPYTFILI-ASKELPKQCIRFGTSSAKYASRKNVGVR 204

Query: 181 VPDSNFIRVIARGSGTALALT 201
           +PD    + I +     L  T
Sbjct: 205 MPDDAICQAILKEMDAPLICT 225


>Glyma19g25900.3 
          Length = 259

 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 65/152 (42%), Gaps = 22/152 (14%)

Query: 69  ARDDYAAEAV-EALKAGKVIAVPTDTLYGFACDACSLEAVNRIYEIKGRKHTSPLAICVG 127
           A D +  E +   LK G V  +PTDT+Y   CD  S  A+ R+  IK  + + PL+I   
Sbjct: 77  ASDSWKLEPIANLLKQGAVGVIPTDTMYAIVCDLRSQSAIERLRRIKNIEASKPLSILCH 136

Query: 128 DVSDINRFAVTDHLPHG----------LLDSLLPGPVTVVLKRGESSILEQSLNPGFDS- 176
              DI+++  T   P G           +   LPGP T +L      + +Q +  G  S 
Sbjct: 137 SFRDIDKY--TAGFPRGDGQGHANLFKAVKHYLPGPYTFILI-ASKELPKQCIRFGTSSA 193

Query: 177 -------IGVRVPDSNFIRVIARGSGTALALT 201
                  +GVR+PD    + I +     L  T
Sbjct: 194 KYASRKNVGVRMPDDAICQAILKEMDAPLICT 225


>Glyma16g06090.1 
          Length = 322

 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 68/248 (27%), Positives = 96/248 (38%), Gaps = 66/248 (26%)

Query: 64  GVVHPARDDYAAEA------VEALKAGKVIAVPTDTLYGFACDACSLEAVNRIYEIKGRK 117
           G+VH   D  A+++      V  LK G V  +PTDT+Y   CD  S  A+ R+  IK  +
Sbjct: 60  GLVHIEADPSASDSWKLEPIVNLLKQGAVGVIPTDTMYSIVCDLRSHSAIERLRRIKNIE 119

Query: 118 HTSPLAICVGDVSDINRFAVTDHLPHG----------LLDSLLPGPVTVVLKRGESSILE 167
            + PL+I      DI+++  T   P G           +   LPGP      R  ++ L 
Sbjct: 120 ASKPLSILCHSFRDIDKY--TAGFPRGDGQGHANLFKAVKQYLPGP------RNANNTLS 171

Query: 168 QSL--------NPGF--------------------------DSIGVRVPDSNFIRVIARG 193
            +L        NP F                           ++GVR+PD    + I + 
Sbjct: 172 NTLYDWLKIIRNPQFWWVLLNKERELFNEKFGTSSAKYASRKNVGVRMPDDAICQAILKE 231

Query: 194 SGTALALTSANLSGQPS----SVCIKDFEKLWEHCAFVFDGGLLPSGRAGSTVVDLTTPH 249
               L  TS     +       V I D     E   FV DGG+  +    STVVD+T   
Sbjct: 232 MDAPLICTSIKFQKEDEWMIDPVTIADTYGP-EGLDFVVDGGVRVAD--PSTVVDMTK-M 287

Query: 250 KYKILRPG 257
             K+LR G
Sbjct: 288 PPKVLRQG 295