Miyakogusa Predicted Gene

Lj3g3v3085650.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3085650.1 Non Chatacterized Hit- tr|C6TJ54|C6TJ54_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.7398
PE=,53.33,0.00000000000004,seg,NULL,CUFF.45261.1
         (182 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g08070.1                                                        64   1e-10
Glyma13g40070.1                                                        50   1e-06

>Glyma12g08070.1 
          Length = 401

 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 39/90 (43%), Positives = 53/90 (58%), Gaps = 4/90 (4%)

Query: 53  KQTEFPSSRSSTLCSHTTMRLPCQGISPPVTIWTAVPVFSPPP-ATMFHHQEMXXXXXXX 111
           ++ +FP++ ++       MR PCQG++PPVTI TA+PVFSPPP A    HQ +       
Sbjct: 269 RRPKFPAAGAAPYVPIRQMR-PCQGMAPPVTIRTAIPVFSPPPAAAAVSHQVLRAPHVRV 327

Query: 112 XXXXSTRQAVPVYTA--PPIRRYVPAPICK 139
               + RQAVPV+    PPIR+  P PI K
Sbjct: 328 APPVTIRQAVPVFATPPPPIRKDEPVPIPK 357


>Glyma13g40070.1 
          Length = 479

 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 1/88 (1%)

Query: 56  EFPSSRSSTLCSHTTMRLPCQGISPPVTIWTAVPVFSPPPATMFHHQEMXXXXXXXXXXX 115
           +FP++ ++       MR  CQ I+PPVTI T VP F+ PPA++  H  +           
Sbjct: 285 KFPAAGAAPYVPIRQMRPSCQRIAPPVTIRTVVPAFAAPPASV-PHPVIRAPPVRVAPPV 343

Query: 116 STRQAVPVYTAPPIRRYVPAPICKGRTD 143
           + RQAVP+Y AP  ++ +P     G+ D
Sbjct: 344 TIRQAVPLYAAPKQQKDLPTANASGQQD 371