Miyakogusa Predicted Gene

Lj3g3v3043320.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3043320.1 Non Chatacterized Hit- tr|Q94LR7|Q94LR7_ORYSJ
Putative uncharacterized protein OSJNBb0011A08.17
OS=O,32.71,3e-18,seg,NULL; Shugoshin_C,Shugoshin, C-terminal;
coiled-coil,NULL,CUFF.45185.1
         (288 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g08580.1                                                       289   2e-78
Glyma10g34030.2                                                        84   2e-16
Glyma10g34030.1                                                        83   3e-16
Glyma20g33560.1                                                        74   2e-13
Glyma20g33560.2                                                        73   3e-13

>Glyma12g08580.1 
          Length = 253

 Score =  289 bits (739), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 168/265 (63%), Positives = 196/265 (73%), Gaps = 25/265 (9%)

Query: 3   MAKRSSIGSLMRKKLSDITNSDHHHHLPPLD------SFPSDQDCTIQQLLKEREALIQL 56
           MAK+S IGSLMRKKLSDITN+ +    PPL       + PSD +  IQQLLKER ALIQL
Sbjct: 8   MAKKS-IGSLMRKKLSDITNNTN----PPLSQQQLDTTLPSDNNF-IQQLLKERTALIQL 61

Query: 57  LAERNKVMETNGAEVKKLRADIKKLQLQNWSLAQSNSHMLAELNLGRERIKTLQHELLWR 116
           LAERNK++E +G E+++LRAD+ KLQ+QNW+LAQSNSHMLAELN+GRERIKTLQHE+LWR
Sbjct: 62  LAERNKIIEASGVELRRLRADVTKLQIQNWNLAQSNSHMLAELNMGRERIKTLQHEILWR 121

Query: 117 AALLKGKTMEDVQEKVEIDAQKSASMSQSQVPKEEDEKVVQPPPKASNDEQHASMNRRRI 176
           AAL+KGK + DVQEKVEID +K+ ++SQ Q   EEDEK  QP PKASNDE+H  MNRRRI
Sbjct: 122 AALIKGKNV-DVQEKVEIDCEKNPTLSQLQ---EEDEKAGQPSPKASNDEKHNCMNRRRI 177

Query: 177 RSRCKSIGSSTASXXXXXXXXXXXXRSLRRHSASFKTREHEPLENLFELEDAQYIVTQSG 236
           RS+     SS+AS            R LRRHS +FKT EHEPLENLFELEDA Y+VTQ  
Sbjct: 178 RSKSTG--SSSASKNTSKDKVKDNGRRLRRHSTTFKTHEHEPLENLFELEDATYLVTQ-- 233

Query: 237 PNMLSSPAVKTETGESSVSRNETTR 261
                SP  KT  G+SS SRNE  R
Sbjct: 234 -----SPISKTGRGKSSDSRNEAPR 253


>Glyma10g34030.2 
          Length = 409

 Score = 84.0 bits (206), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 74/251 (29%), Positives = 117/251 (46%), Gaps = 41/251 (16%)

Query: 6   RSSIGSLMRKKLSDITNSDHHHHLPPLDSFPSD--QDCTIQQLLKEREALIQLLAERNKV 63
           R+++G+   K L+DI+N            FP    Q  ++  LLKE+E LI+ LA R+ V
Sbjct: 42  RANVGASQNKILADISN------------FPQQPKQHISVDHLLKEKEILIKHLATRDAV 89

Query: 64  METNGAEVKKLRADIKKLQLQNWSLAQSNSHMLAELNLGRERIKTLQHELLWRAALLKGK 123
           +E+  AE+ K + + +KL+ QN  LA +NS ML ELN  R++ + LQ EL  +  +L   
Sbjct: 90  IESCKAELHKCQTNFQKLRKQNAELALTNSQMLVELNSSRQKQRELQLELGSKNGVLNAM 149

Query: 124 TME------DVQEKVEIDAQ--KSASMSQSQVPKEEDEKVVQPPPKASNDEQHASMNRRR 175
            +E       V+ K E DA   ++    QS    +ED K               +  R+R
Sbjct: 150 RLELTLKKQTVKSKHETDANEVRACQSKQSDQSLQEDNK--------------GNAKRKR 195

Query: 176 IRSRCKSIGSSTASXXXXXXXXXXXXRSLRRHSASFKTREHEPLENLFELEDAQYI---- 231
           + S+ +S   +                SLRR SA  K  + EP ++  E+ D  ++    
Sbjct: 196 V-SKSQSSAPAVIKQVKSTKKVENQRYSLRRQSAGLKAEKPEPTKDFLEVVDISHLQENS 254

Query: 232 VTQSGPNMLSS 242
             ++GP  L S
Sbjct: 255 ANENGPASLGS 265



 Score = 66.6 bits (161), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 39/94 (41%), Positives = 52/94 (55%), Gaps = 7/94 (7%)

Query: 202 RSLRRHSASFKTREHEPLENLFELEDAQYIVTQSGPNM--LSSPAVKTETGESS-----V 254
           +S+RR +  F+    EP E+ F+ +DA++ V+Q   NM   + P   T T E        
Sbjct: 297 QSMRRQTNRFRPENPEPAEDCFKTDDAKFNVSQLSDNMSEKNCPTTSTVTSEQENDACIF 356

Query: 255 SRNETTRYSFGRPPRRAAEKVQSYKEVPLNVKMR 288
              ET R S GRP RR  EK+ SYKEVP+N KMR
Sbjct: 357 EPQETRRSSVGRPLRRTVEKIVSYKEVPVNRKMR 390


>Glyma10g34030.1 
          Length = 437

 Score = 83.2 bits (204), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 74/251 (29%), Positives = 117/251 (46%), Gaps = 41/251 (16%)

Query: 6   RSSIGSLMRKKLSDITNSDHHHHLPPLDSFPSD--QDCTIQQLLKEREALIQLLAERNKV 63
           R+++G+   K L+DI+N            FP    Q  ++  LLKE+E LI+ LA R+ V
Sbjct: 42  RANVGASQNKILADISN------------FPQQPKQHISVDHLLKEKEILIKHLATRDAV 89

Query: 64  METNGAEVKKLRADIKKLQLQNWSLAQSNSHMLAELNLGRERIKTLQHELLWRAALLKGK 123
           +E+  AE+ K + + +KL+ QN  LA +NS ML ELN  R++ + LQ EL  +  +L   
Sbjct: 90  IESCKAELHKCQTNFQKLRKQNAELALTNSQMLVELNSSRQKQRELQLELGSKNGVLNAM 149

Query: 124 TME------DVQEKVEIDAQ--KSASMSQSQVPKEEDEKVVQPPPKASNDEQHASMNRRR 175
            +E       V+ K E DA   ++    QS    +ED K               +  R+R
Sbjct: 150 RLELTLKKQTVKSKHETDANEVRACQSKQSDQSLQEDNK--------------GNAKRKR 195

Query: 176 IRSRCKSIGSSTASXXXXXXXXXXXXRSLRRHSASFKTREHEPLENLFELEDAQYI---- 231
           + S+ +S   +                SLRR SA  K  + EP ++  E+ D  ++    
Sbjct: 196 V-SKSQSSAPAVIKQVKSTKKVENQRYSLRRQSAGLKAEKPEPTKDFLEVVDISHLQENS 254

Query: 232 VTQSGPNMLSS 242
             ++GP  L S
Sbjct: 255 ANENGPASLGS 265



 Score = 66.2 bits (160), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 39/94 (41%), Positives = 52/94 (55%), Gaps = 7/94 (7%)

Query: 202 RSLRRHSASFKTREHEPLENLFELEDAQYIVTQSGPNML--SSPAVKTETGESS-----V 254
           +S+RR +  F+    EP E+ F+ +DA++ V+Q   NM   + P   T T E        
Sbjct: 325 QSMRRQTNRFRPENPEPAEDCFKTDDAKFNVSQLSDNMSEKNCPTTSTVTSEQENDACIF 384

Query: 255 SRNETTRYSFGRPPRRAAEKVQSYKEVPLNVKMR 288
              ET R S GRP RR  EK+ SYKEVP+N KMR
Sbjct: 385 EPQETRRSSVGRPLRRTVEKIVSYKEVPVNRKMR 418


>Glyma20g33560.1 
          Length = 435

 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 119/250 (47%), Gaps = 37/250 (14%)

Query: 7   SSIGSLMRKKLSDITNSDHHHHLPPLDSFPSDQDCTIQQLLKEREALIQLLAERNKVMET 66
           +++G+   K L+DI+N      LP        Q  ++  LLKE+E LI+LLA R+ ++E+
Sbjct: 37  ANVGASQNKILADISN------LPQ----QPKQHISVDHLLKEKETLIKLLANRDAIIES 86

Query: 67  NGAEVKKLRADIKKLQLQNWSLAQSNSHMLAELNLGRERIKTLQHELLWRAALLKGKTME 126
             AE+ K + + +KL+ QN  LA +N+ MLAELN  R++++ LQ EL  +  +L    +E
Sbjct: 87  CKAELHKCQTNFQKLRKQNAELALTNAQMLAELNSSRQKLRELQLELGSKNGILNAMRLE 146

Query: 127 DV------QEKVEIDAQKSASMSQSQVPKEEDEKVVQPPPKASNDEQHASMNRRRIRSRC 180
                   + K E DA +     QS++  +           +  ++   +  R+R+ S+ 
Sbjct: 147 LTLKEQTDKTKHETDANE-VRACQSKLSDQ-----------SLQEDNKGNAKRKRV-SKP 193

Query: 181 KSIGSSTASXXXXXXXXXXXXRSLRRHSASFKTREHEPLENLFELEDA--------QYIV 232
           +S   +                SLRR SA  K  + EP ++  E+ +         + + 
Sbjct: 194 QSSAPAVIKQVKSTGKVDNQRYSLRRQSAGLKAEKPEPTKDSLEVVEVKDDISHLQENLA 253

Query: 233 TQSGPNMLSS 242
            ++GP  L S
Sbjct: 254 NENGPTSLGS 263



 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 40/94 (42%), Positives = 55/94 (58%), Gaps = 7/94 (7%)

Query: 202 RSLRRHSASFKTREHEPLENLFELEDAQYIVTQSGPNML--SSPAVKTETGE-----SSV 254
           +S+RR +  F+    EP E+ F+++DA++ V+Q   NM   + P   T T E      + 
Sbjct: 323 QSMRRQTNRFRPGNPEPAEDFFKIDDAKFTVSQLSDNMSEKNCPTTSTVTSEQENDACTF 382

Query: 255 SRNETTRYSFGRPPRRAAEKVQSYKEVPLNVKMR 288
              ET R S GRP RR  EK+ SYKEVPLN+KMR
Sbjct: 383 EPQETRRSSVGRPLRRTVEKIVSYKEVPLNLKMR 416


>Glyma20g33560.2 
          Length = 426

 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 119/250 (47%), Gaps = 37/250 (14%)

Query: 7   SSIGSLMRKKLSDITNSDHHHHLPPLDSFPSDQDCTIQQLLKEREALIQLLAERNKVMET 66
           +++G+   K L+DI+N      LP        Q  ++  LLKE+E LI+LLA R+ ++E+
Sbjct: 37  ANVGASQNKILADISN------LPQ----QPKQHISVDHLLKEKETLIKLLANRDAIIES 86

Query: 67  NGAEVKKLRADIKKLQLQNWSLAQSNSHMLAELNLGRERIKTLQHELLWRAALLKGKTME 126
             AE+ K + + +KL+ QN  LA +N+ MLAELN  R++++ LQ EL  +  +L    +E
Sbjct: 87  CKAELHKCQTNFQKLRKQNAELALTNAQMLAELNSSRQKLRELQLELGSKNGILNAMRLE 146

Query: 127 DV------QEKVEIDAQKSASMSQSQVPKEEDEKVVQPPPKASNDEQHASMNRRRIRSRC 180
                   + K E DA +     QS++  +           +  ++   +  R+R+ S+ 
Sbjct: 147 LTLKEQTDKTKHETDANE-VRACQSKLSDQ-----------SLQEDNKGNAKRKRV-SKP 193

Query: 181 KSIGSSTASXXXXXXXXXXXXRSLRRHSASFKTREHEPLENLFELEDA--------QYIV 232
           +S   +                SLRR SA  K  + EP ++  E+ +         + + 
Sbjct: 194 QSSAPAVIKQVKSTGKVDNQRYSLRRQSAGLKAEKPEPTKDSLEVVEVKDDISHLQENLA 253

Query: 233 TQSGPNMLSS 242
            ++GP  L S
Sbjct: 254 NENGPTSLGS 263



 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 40/94 (42%), Positives = 55/94 (58%), Gaps = 7/94 (7%)

Query: 202 RSLRRHSASFKTREHEPLENLFELEDAQYIVTQSGPNML--SSPAVKTETGE-----SSV 254
           +S+RR +  F+    EP E+ F+++DA++ V+Q   NM   + P   T T E      + 
Sbjct: 323 QSMRRQTNRFRPGNPEPAEDFFKIDDAKFTVSQLSDNMSEKNCPTTSTVTSEQENDACTF 382

Query: 255 SRNETTRYSFGRPPRRAAEKVQSYKEVPLNVKMR 288
              ET R S GRP RR  EK+ SYKEVPLN+KMR
Sbjct: 383 EPQETRRSSVGRPLRRTVEKIVSYKEVPLNLKMR 416