Miyakogusa Predicted Gene

Lj3g3v3026740.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3026740.1 Non Chatacterized Hit- tr|C5XVQ2|C5XVQ2_SORBI
Putative uncharacterized protein Sb04g023870
OS=Sorghu,38.12,2e-19,NAP-like,NULL; NAP,Nucleosome assembly protein
(NAP); SUBFAMILY NOT NAMED,NULL; TESTIS-SPECIFIC Y-EN,gene.g50169.t1.1
         (169 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g10770.1                                                       176   9e-45
Glyma04g33750.1                                                       172   1e-43
Glyma06g20700.2                                                       171   3e-43
Glyma06g20700.1                                                       169   1e-42
Glyma05g01120.1                                                       167   5e-42
Glyma04g33750.2                                                       162   1e-40
Glyma04g33750.3                                                       160   7e-40
Glyma18g22860.1                                                       151   3e-37
Glyma03g05170.1                                                       120   7e-28
Glyma01g26820.1                                                       119   2e-27
Glyma07g20550.1                                                       115   3e-26
Glyma03g05160.1                                                       113   1e-25

>Glyma17g10770.1 
          Length = 258

 Score =  176 bits (446), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 94/180 (52%), Positives = 117/180 (65%), Gaps = 20/180 (11%)

Query: 1   MEKLEEMEDKINLIHMMA----FQVDD-YKERLKSAYQERSKIIDSIPGFWFTVVLLKHP 55
           +EKL+E++D+++ I+  A     +V+  Y E  K  Y +R+ ++ SIP FWFT   + HP
Sbjct: 27  IEKLQEVQDELDKINEEASDKVLEVEQKYNEIRKPVYDKRNDVVKSIPDFWFTA-FMSHP 85

Query: 56  AYRQLFNQEDHKIFQYFTSLEVEDDMDVNSSYSITFNFKPNPYFENTKLQKTLTFLQEGT 115
           A  +L N ED KIF+Y  SL+VED+ DV S YSITFNF PNPYFENTKL KT TFL+EGT
Sbjct: 86  ALCELLNVEDQKIFKYLGSLDVEDNKDVKSGYSITFNFNPNPYFENTKLTKTFTFLEEGT 145

Query: 116 TKITATPIKWKQNNQVPA--------------DFGFFSWFTMTEQKDDVHHIHDEFQYLI 161
           TKITATPIKWK+   +P               D  FFSWF+  EQKDDV  IHDE   LI
Sbjct: 146 TKITATPIKWKEGKGLPNGLDHDKNGNKRARIDISFFSWFSDCEQKDDVDEIHDEVAELI 205


>Glyma04g33750.1 
          Length = 261

 Score =  172 bits (436), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 93/180 (51%), Positives = 117/180 (65%), Gaps = 20/180 (11%)

Query: 1   MEKLEEMEDKINLIHMMA----FQVDD-YKERLKSAYQERSKIIDSIPGFWFTVVLLKHP 55
           +EKL+E++D++  I+  A     +++  Y E  K  Y +R+ II++IP FW T   L HP
Sbjct: 29  IEKLQEIQDELEKINEEASDKVLEIEQKYNEIRKPVYDKRNDIINAIPDFWLTA-FLSHP 87

Query: 56  AYRQLFNQEDHKIFQYFTSLEVEDDMDVNSSYSITFNFKPNPYFENTKLQKTLTFLQEGT 115
           A   L N+ED KIF+Y +SLEVED  DV S YSITFNF  NPYFE+TKL KT TFL+EGT
Sbjct: 88  ALGDLLNEEDQKIFKYLSSLEVEDFKDVKSGYSITFNFNANPYFEDTKLVKTYTFLEEGT 147

Query: 116 TKITATPIKWKQ--------------NNQVPADFGFFSWFTMTEQKDDVHHIHDEFQYLI 161
           TK+TATPIKWK+              N + P D  FFSWF+ TEQKDD+  IHDE   LI
Sbjct: 148 TKVTATPIKWKEGKGIPNGVNHEKKGNKRAPTDVSFFSWFSDTEQKDDIDDIHDEVAELI 207


>Glyma06g20700.2 
          Length = 263

 Score =  171 bits (434), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 93/180 (51%), Positives = 116/180 (64%), Gaps = 20/180 (11%)

Query: 1   MEKLEEMEDKINLIHMMA----FQVDD-YKERLKSAYQERSKIIDSIPGFWFTVVLLKHP 55
           +EKL+E++D++  I+  A     +++  Y E  K  Y +R+ II +IP FW T   L HP
Sbjct: 29  IEKLQEIQDELEKINEEASDKVLEIEQKYNEIRKPVYDKRNDIIKAIPDFWLTA-FLSHP 87

Query: 56  AYRQLFNQEDHKIFQYFTSLEVEDDMDVNSSYSITFNFKPNPYFENTKLQKTLTFLQEGT 115
           A   L N+ED KIF+Y +SLEVED  DV S YSITFNF  NPYFE+TKL KT TFL+EGT
Sbjct: 88  ALGDLLNEEDQKIFKYLSSLEVEDFKDVKSGYSITFNFNANPYFEDTKLVKTYTFLEEGT 147

Query: 116 TKITATPIKWKQ--------------NNQVPADFGFFSWFTMTEQKDDVHHIHDEFQYLI 161
           TK+TATPIKWK+              N + P D  FFSWF+ TEQKDD+  IHDE   LI
Sbjct: 148 TKVTATPIKWKEGKGIPNGVNHEKKRNKRAPTDVSFFSWFSDTEQKDDIDDIHDEVAELI 207


>Glyma06g20700.1 
          Length = 264

 Score =  169 bits (428), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 91/175 (52%), Positives = 114/175 (65%), Gaps = 20/175 (11%)

Query: 1   MEKLEEMEDKINLIHMMA----FQVDD-YKERLKSAYQERSKIIDSIPGFWFTVVLLKHP 55
           +EKL+E++D++  I+  A     +++  Y E  K  Y +R+ II +IP FW T   L HP
Sbjct: 29  IEKLQEIQDELEKINEEASDKVLEIEQKYNEIRKPVYDKRNDIIKAIPDFWLTA-FLSHP 87

Query: 56  AYRQLFNQEDHKIFQYFTSLEVEDDMDVNSSYSITFNFKPNPYFENTKLQKTLTFLQEGT 115
           A   L N+ED KIF+Y +SLEVED  DV S YSITFNF  NPYFE+TKL KT TFL+EGT
Sbjct: 88  ALGDLLNEEDQKIFKYLSSLEVEDFKDVKSGYSITFNFNANPYFEDTKLVKTYTFLEEGT 147

Query: 116 TKITATPIKWKQ--------------NNQVPADFGFFSWFTMTEQKDDVHHIHDE 156
           TK+TATPIKWK+              N + P D  FFSWF+ TEQKDD+  IHDE
Sbjct: 148 TKVTATPIKWKEGKGIPNGVNHEKKRNKRAPTDVSFFSWFSDTEQKDDIDDIHDE 202


>Glyma05g01120.1 
          Length = 256

 Score =  167 bits (423), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 91/180 (50%), Positives = 114/180 (63%), Gaps = 20/180 (11%)

Query: 1   MEKLEEMEDKINLIHMMA----FQVDD-YKERLKSAYQERSKIIDSIPGFWFTVVLLKHP 55
           +EKL+E++D+++ I+  A     +V+  Y E  K  Y +R++I+ SIP FWFT   + HP
Sbjct: 27  IEKLQEVQDELDKINEEASDKVLEVEQKYNEIRKPVYDKRNEIVKSIPDFWFTA-FMSHP 85

Query: 56  AYRQLFNQEDHKIFQYFTSLEVEDDMDVNSSYSITFNFKPNPYFENTKLQKTLTFLQEGT 115
           A   L N ED KIF+Y  SL+VED+ DV S YSITFNF  NPYFEN KL KT TFL+EGT
Sbjct: 86  ALCDLLNVEDQKIFKYLGSLDVEDNKDVKSGYSITFNFNLNPYFENAKLTKTFTFLEEGT 145

Query: 116 TKITATPIKWKQNNQVPA--------------DFGFFSWFTMTEQKDDVHHIHDEFQYLI 161
           TKITATPIKWK+   +P               D  FFSWF+  EQK D+  IHDE   LI
Sbjct: 146 TKITATPIKWKEGKGLPNGVEHDKNGKKRARIDISFFSWFSDCEQKGDMDEIHDEVAELI 205


>Glyma04g33750.2 
          Length = 258

 Score =  162 bits (411), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 91/180 (50%), Positives = 114/180 (63%), Gaps = 23/180 (12%)

Query: 1   MEKLEEMEDKINLIHMMA----FQVDD-YKERLKSAYQERSKIIDSIPGFWFTVVLLKHP 55
           +EKL+E++D++  I+  A     +++  Y E  K  Y +R+ II++IP FW T   L HP
Sbjct: 29  IEKLQEIQDELEKINEEASDKVLEIEQKYNEIRKPVYDKRNDIINAIPDFWLTA-FLSHP 87

Query: 56  AYRQLFNQEDHKIFQYFTSLEVEDDMDVNSSYSITFNFKPNPYFENTKLQKTLTFLQEGT 115
           A   L N+ED K   Y +SLEVED  DV S YSITFNF  NPYFE+TKL KT TFL+EGT
Sbjct: 88  ALGDLLNEEDQK---YLSSLEVEDFKDVKSGYSITFNFNANPYFEDTKLVKTYTFLEEGT 144

Query: 116 TKITATPIKWKQ--------------NNQVPADFGFFSWFTMTEQKDDVHHIHDEFQYLI 161
           TK+TATPIKWK+              N + P D  FFSWF+ TEQKDD+  IHDE   LI
Sbjct: 145 TKVTATPIKWKEGKGIPNGVNHEKKGNKRAPTDVSFFSWFSDTEQKDDIDDIHDEVAELI 204


>Glyma04g33750.3 
          Length = 259

 Score =  160 bits (405), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 89/175 (50%), Positives = 112/175 (64%), Gaps = 23/175 (13%)

Query: 1   MEKLEEMEDKINLIHMMA----FQVDD-YKERLKSAYQERSKIIDSIPGFWFTVVLLKHP 55
           +EKL+E++D++  I+  A     +++  Y E  K  Y +R+ II++IP FW T   L HP
Sbjct: 29  IEKLQEIQDELEKINEEASDKVLEIEQKYNEIRKPVYDKRNDIINAIPDFWLTA-FLSHP 87

Query: 56  AYRQLFNQEDHKIFQYFTSLEVEDDMDVNSSYSITFNFKPNPYFENTKLQKTLTFLQEGT 115
           A   L N+ED K   Y +SLEVED  DV S YSITFNF  NPYFE+TKL KT TFL+EGT
Sbjct: 88  ALGDLLNEEDQK---YLSSLEVEDFKDVKSGYSITFNFNANPYFEDTKLVKTYTFLEEGT 144

Query: 116 TKITATPIKWKQ--------------NNQVPADFGFFSWFTMTEQKDDVHHIHDE 156
           TK+TATPIKWK+              N + P D  FFSWF+ TEQKDD+  IHDE
Sbjct: 145 TKVTATPIKWKEGKGIPNGVNHEKKGNKRAPTDVSFFSWFSDTEQKDDIDDIHDE 199


>Glyma18g22860.1 
          Length = 156

 Score =  151 bits (382), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 79/142 (55%), Positives = 91/142 (64%), Gaps = 10/142 (7%)

Query: 24  YKERLKSAYQERSKIIDSIPGFWFTVVLLKHPAYRQLFNQEDHKIFQYFTSLEVEDDMDV 83
           Y E  K  Y +R+ ++ SIP FWFT   + HPA  +L N ED KIF Y  SL+VED+ DV
Sbjct: 16  YNEIRKPVYNKRNDVVKSIPDFWFTA-FMSHPALYELLNVEDQKIFMYLGSLDVEDNKDV 74

Query: 84  NSSYSITFNFKPNPYFENTKLQKTLTFLQEGTTKITATPIKWK----QNNQVPADFGFFS 139
            S YSITFNF PNPYFEN KL KT TFL+EGT KITATPIKWK    Q +        FS
Sbjct: 75  KSGYSITFNFNPNPYFENIKLTKTFTFLEEGTAKITATPIKWKMERGQEDMFCITISIFS 134

Query: 140 -----WFTMTEQKDDVHHIHDE 156
                WF+  EQK+DV  IHDE
Sbjct: 135 ISLSLWFSDCEQKNDVDEIHDE 156


>Glyma03g05170.1 
          Length = 179

 Score =  120 bits (301), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 54/83 (65%), Positives = 65/83 (78%)

Query: 50  VLLKHPAYRQLFNQEDHKIFQYFTSLEVEDDMDVNSSYSITFNFKPNPYFENTKLQKTLT 109
           +++ HPA  +L N ED KIF+Y  S +VED+ DV S YSITFNF PNPYF+NTKL KT T
Sbjct: 1   LIMSHPALCELLNVEDQKIFKYLGSHDVEDNKDVKSGYSITFNFNPNPYFQNTKLTKTFT 60

Query: 110 FLQEGTTKITATPIKWKQNNQVP 132
           FL+EGTTKITATPIKWK+   +P
Sbjct: 61  FLEEGTTKITATPIKWKEGKGLP 83


>Glyma01g26820.1 
          Length = 144

 Score =  119 bits (297), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 55/87 (63%), Positives = 63/87 (72%)

Query: 49  VVLLKHPAYRQLFNQEDHKIFQYFTSLEVEDDMDVNSSYSITFNFKPNPYFENTKLQKTL 108
            +++ HPA  +L N ED KIF+Y  SL+VED  DV S YSITFNF PNPYF NTKL KT 
Sbjct: 15  CLIMSHPALCELLNVEDQKIFKYLGSLDVEDYKDVKSGYSITFNFNPNPYFHNTKLTKTF 74

Query: 109 TFLQEGTTKITATPIKWKQNNQVPADF 135
           TFL+EGTTKIT TPIKWK+    P D 
Sbjct: 75  TFLEEGTTKITVTPIKWKEGKDYPMDL 101


>Glyma07g20550.1 
          Length = 96

 Score =  115 bits (287), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 54/83 (65%), Positives = 65/83 (78%), Gaps = 1/83 (1%)

Query: 50  VLLKHPAYRQLFNQEDHKIFQYFTSLEVEDDMDVNSSYSITFNFKPNPYFENTKLQKTLT 109
           +++ HPA  +L N ED K F+Y  SL+VED+ DV S YSITFNF PNPYF+NTKL KT T
Sbjct: 1   LIMSHPALCELLNVEDQK-FKYLGSLDVEDNKDVKSGYSITFNFNPNPYFQNTKLTKTFT 59

Query: 110 FLQEGTTKITATPIKWKQNNQVP 132
           FL+EGTTKITATPIKWK+   +P
Sbjct: 60  FLEEGTTKITATPIKWKEGKGLP 82


>Glyma03g05160.1 
          Length = 198

 Score =  113 bits (282), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 52/84 (61%), Positives = 64/84 (76%)

Query: 49  VVLLKHPAYRQLFNQEDHKIFQYFTSLEVEDDMDVNSSYSITFNFKPNPYFENTKLQKTL 108
            +++ H A  +L N ED KIF+Y  SL+VED+ DV S YSITFNF PNPYF+NTKL KT 
Sbjct: 13  CLIMSHLALCELLNVEDQKIFKYLGSLDVEDNKDVKSGYSITFNFNPNPYFQNTKLTKTF 72

Query: 109 TFLQEGTTKITATPIKWKQNNQVP 132
           TFL+EGTTKI+AT IKWK+   +P
Sbjct: 73  TFLEEGTTKISATLIKWKEGKGLP 96