Miyakogusa Predicted Gene

Lj3g3v3006470.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3006470.1 Non Chatacterized Hit- tr|I1HFP1|I1HFP1_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,39.39,9e-19,FAMILY NOT NAMED,NULL; seg,NULL,CUFF.45192.1
         (297 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g09000.1                                                       230   1e-60
Glyma12g30600.1                                                       197   9e-51
Glyma11g19480.1                                                       160   2e-39
Glyma17g05340.1                                                       115   7e-26
Glyma03g34850.1                                                       104   9e-23
Glyma03g34850.2                                                       103   3e-22
Glyma19g37540.1                                                       101   9e-22
Glyma11g19480.2                                                        90   3e-18

>Glyma12g09000.1 
          Length = 299

 Score =  230 bits (586), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 141/263 (53%), Positives = 158/263 (60%), Gaps = 7/263 (2%)

Query: 1   MEAPMEFWGVEVKVGQTVKVEPSEPFPGYIHISQAALGEATKKDKAAEPVILYLKVEDKK 60
           M+APMEFWGVEVKVGQTV V+P +P   YIHISQ ALGEA KKDK  EPV+LYLKV ++K
Sbjct: 1   MDAPMEFWGVEVKVGQTVTVDPMDPVDSYIHISQVALGEA-KKDKPNEPVVLYLKVGEQK 59

Query: 61  YVLGTLNRDDIPHLSMDLVLDDKSELSHNSKGASVYFCGYKVLTXXXXXX--XXXXXXXX 118
            VLGTL+RD IPHLS+DLVLD  SELSH SK ASV+FCGYKVLT                
Sbjct: 60  IVLGTLSRDGIPHLSLDLVLDSDSELSHTSKSASVFFCGYKVLTGNDNASDFSDSSEEDE 119

Query: 119 XXXXXXXXNGKPETKTEDXXXXXXXXXXXXXXXXXXXXXIVDPKKDEEEADLDVSSPDVS 178
                   NGKPE K E                        DPKKDE++   D S  D++
Sbjct: 120 ELALEGQDNGKPELKAE---GAKVTKPSKSIPKIGAPAKAADPKKDEDDDSDDESDDDLA 176

Query: 179 GYXXXXXXXXXXXXXXXXXXXXXXXXTPTPAKKVDQGKKRPNESASKTPVSGKKAKNATP 238
           G                           TPAKKVDQGKKRPNESA+KTP+S KKAK ATP
Sbjct: 177 G-EDESGSSDEMDDDSNSEEESDGDDEETPAKKVDQGKKRPNESAAKTPISAKKAKTATP 235

Query: 239 EKPDGKKNVHTATPHPKKQDGKT 261
           EK DGKK+VH ATPHP K+ GKT
Sbjct: 236 EKTDGKKSVHVATPHPSKKGGKT 258


>Glyma12g30600.1 
          Length = 307

 Score =  197 bits (502), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 128/261 (49%), Positives = 148/261 (56%), Gaps = 6/261 (2%)

Query: 5   MEFWGVEVKVGQTVKVEPSEPFPGYIHISQAALGEATKKDKAAEPVILYLKVEDKKYVLG 64
           MEFWG EVKVG++VKV+P+E F   IH+SQAALGEA KKDK+ EPV+LYLKV  +K+VLG
Sbjct: 1   MEFWGAEVKVGESVKVDPAE-FEACIHLSQAALGEA-KKDKSNEPVVLYLKVGQQKFVLG 58

Query: 65  TLNRDDIPHLSMDLVLDDKSELSHNSKGASVYFCGYKVL--TXXXXXXXXXXXXXXXXXX 122
           TL+R+ IP + ++LVL+ + ELSHNSK ASV+FCGYK                       
Sbjct: 59  TLSREKIPQIPLELVLEKEFELSHNSKNASVHFCGYKAFYDAGDDSEEDEFTDSEEDVPL 118

Query: 123 XXXXNGKPETKTEDXXXXXXXXXXXXXXXXXXXXXIVDPKKDEEEADLDVSSPDVSGYXX 182
               NGKPETK E+                     IV+PKKD EE   D S  D      
Sbjct: 119 LKAENGKPETKAEELKVPESKKAVAKASASAKQVKIVEPKKDNEEDSDDDSDEDDDFGSS 178

Query: 183 XXXXXXXXXXXXXXXXXXXXXXTPT--PAKKVDQGKKRPNESASKTPVSGKKAKNATPEK 240
                                   T    KK D GKKRPNESASKTPVS KKAKNATPEK
Sbjct: 179 DEEMEDADSDSDDESDDKEDDDEETHPKNKKADLGKKRPNESASKTPVSSKKAKNATPEK 238

Query: 241 PDGKKNVHTATPHPKKQDGKT 261
            DGKK  HTATPHP K+ GKT
Sbjct: 239 TDGKKGGHTATPHPAKKGGKT 259


>Glyma11g19480.1 
          Length = 289

 Score =  160 bits (405), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 76/104 (73%), Positives = 87/104 (83%), Gaps = 1/104 (0%)

Query: 1   MEAPMEFWGVEVKVGQTVKVEPSEPFPGYIHISQAALGEATKKDKAAEPVILYLKVEDKK 60
           M+APMEFWGVEVKVGQTV V+P +P   YIHISQ ALGEA KK+K  E V+LYLKV ++K
Sbjct: 1   MDAPMEFWGVEVKVGQTVTVDPMDPVDSYIHISQVALGEA-KKEKPNESVVLYLKVGEQK 59

Query: 61  YVLGTLNRDDIPHLSMDLVLDDKSELSHNSKGASVYFCGYKVLT 104
            VLGTL+RD IPHLS+DLVLD  SELSH SK ASV+FCGY+VLT
Sbjct: 60  IVLGTLSRDGIPHLSLDLVLDSDSELSHTSKSASVFFCGYRVLT 103



 Score = 91.3 bits (225), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 46/55 (83%), Positives = 49/55 (89%)

Query: 207 TPAKKVDQGKKRPNESASKTPVSGKKAKNATPEKPDGKKNVHTATPHPKKQDGKT 261
           TPAKKVDQGKKRPNESA+KTPVS KKAK ATPEK +GKKNVH ATPHP K+ GKT
Sbjct: 194 TPAKKVDQGKKRPNESAAKTPVSAKKAKTATPEKTNGKKNVHVATPHPSKKGGKT 248


>Glyma17g05340.1 
          Length = 159

 Score =  115 bits (287), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 70/159 (44%), Positives = 91/159 (57%), Gaps = 21/159 (13%)

Query: 5   MEFWGVEVKVGQTVKVEPSEPFPGYIHISQAALGEATKKDKAAEPVILYLKVEDKKYVLG 64
           MEFWG EVKVG++VKV+P+E F   IH+SQAALGEA KKDK  EPV+LY+KV ++K+VLG
Sbjct: 1   MEFWGAEVKVGESVKVDPAE-FEACIHLSQAALGEA-KKDKP-EPVVLYMKVGEQKFVLG 57

Query: 65  TLNRDDIPHLSMDLVLDDKSELSHNSKGASVYFCGYKVLTXXXXXXXXXXXXXXXXXXXX 124
           TL+R+ IP +S++LVL+ + ELSH+SK A+                              
Sbjct: 58  TLSREKIPQISLELVLEKEFELSHSSKSAN------------------SDEDDEDVPLIN 99

Query: 125 XXNGKPETKTEDXXXXXXXXXXXXXXXXXXXXXIVDPKK 163
             NGKPETK ED                     +V+PKK
Sbjct: 100 TENGKPETKAEDLKVPESKKAVAKASGSAKQVKVVEPKK 138


>Glyma03g34850.1 
          Length = 322

 Score =  104 bits (260), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 56/136 (41%), Positives = 78/136 (57%), Gaps = 3/136 (2%)

Query: 1   MEAPMEFWGVEVKVGQTVKVEPSEPFPGYIHISQAALGEATKKDKAAEPVILYLKVEDKK 60
           + A MEFWGVEVK G+++KV+P +     IH+S A LG+ TK DK   PV LY+K  ++K
Sbjct: 31  LSASMEFWGVEVKSGESLKVDPGDD--KIIHLSNACLGDVTK-DKEGLPVALYVKFGNQK 87

Query: 61  YVLGTLNRDDIPHLSMDLVLDDKSELSHNSKGASVYFCGYKVLTXXXXXXXXXXXXXXXX 120
            VLGTL+ +  P +S DLV + + ELSHN K  SV+F G+K  +                
Sbjct: 88  LVLGTLSSEAFPQISYDLVFEKEFELSHNWKHGSVFFTGFKAQSQSESDNDEDSDDFDED 147

Query: 121 XXXXXXNGKPETKTED 136
                 NGKPE + ++
Sbjct: 148 IPVSAANGKPEIEVKN 163



 Score = 52.4 bits (124), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 28/51 (54%), Positives = 33/51 (64%)

Query: 210 KKVDQGKKRPNESASKTPVSGKKAKNATPEKPDGKKNVHTATPHPKKQDGK 260
           KK++   KR  +S+ KTPV  KK K  TP+K D K  VH ATPHP KQ GK
Sbjct: 230 KKIEASNKRGIDSSKKTPVPVKKTKFVTPQKTDSKNVVHVATPHPSKQTGK 280


>Glyma03g34850.2 
          Length = 247

 Score =  103 bits (256), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 56/136 (41%), Positives = 78/136 (57%), Gaps = 3/136 (2%)

Query: 1   MEAPMEFWGVEVKVGQTVKVEPSEPFPGYIHISQAALGEATKKDKAAEPVILYLKVEDKK 60
           + A MEFWGVEVK G+++KV+P +     IH+S A LG+ TK DK   PV LY+K  ++K
Sbjct: 31  LSASMEFWGVEVKSGESLKVDPGDD--KIIHLSNACLGDVTK-DKEGLPVALYVKFGNQK 87

Query: 61  YVLGTLNRDDIPHLSMDLVLDDKSELSHNSKGASVYFCGYKVLTXXXXXXXXXXXXXXXX 120
            VLGTL+ +  P +S DLV + + ELSHN K  SV+F G+K  +                
Sbjct: 88  LVLGTLSSEAFPQISYDLVFEKEFELSHNWKHGSVFFTGFKAQSQSESDNDEDSDDFDED 147

Query: 121 XXXXXXNGKPETKTED 136
                 NGKPE + ++
Sbjct: 148 IPVSAANGKPEIEVKN 163


>Glyma19g37540.1 
          Length = 293

 Score =  101 bits (252), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 54/128 (42%), Positives = 72/128 (56%), Gaps = 3/128 (2%)

Query: 5   MEFWGVEVKVGQTVKVEPSEPFPGYIHISQAALGEATKKDKAAEPVILYLKVEDKKYVLG 64
           MEFWGVEVK G+++KV+P +     IH+S A +G+ TK D    PV LY+K  ++K+VLG
Sbjct: 1   MEFWGVEVKNGESLKVDPGDD--KIIHLSNACMGDVTK-DIGGGPVALYVKFGNQKFVLG 57

Query: 65  TLNRDDIPHLSMDLVLDDKSELSHNSKGASVYFCGYKVLTXXXXXXXXXXXXXXXXXXXX 124
           TL+ D  P +S DLV + + ELSHN K  SV+F G+K                       
Sbjct: 58  TLSSDKFPQISYDLVFEKEFELSHNWKYGSVFFTGFKAQPQSESDDDEDSDDIDEDIPVS 117

Query: 125 XXNGKPET 132
             NGKPE 
Sbjct: 118 AVNGKPEV 125



 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 30/52 (57%), Positives = 34/52 (65%)

Query: 209 AKKVDQGKKRPNESASKTPVSGKKAKNATPEKPDGKKNVHTATPHPKKQDGK 260
           AKK++   KR  ES+ KTPV  KK K  TP+K D K  VH ATPHP KQ GK
Sbjct: 200 AKKIEASNKRGIESSKKTPVPVKKTKFVTPQKTDSKNVVHAATPHPSKQAGK 251


>Glyma11g19480.2 
          Length = 193

 Score = 89.7 bits (221), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 46/55 (83%), Positives = 49/55 (89%)

Query: 207 TPAKKVDQGKKRPNESASKTPVSGKKAKNATPEKPDGKKNVHTATPHPKKQDGKT 261
           TPAKKVDQGKKRPNESA+KTPVS KKAK ATPEK +GKKNVH ATPHP K+ GKT
Sbjct: 98  TPAKKVDQGKKRPNESAAKTPVSAKKAKTATPEKTNGKKNVHVATPHPSKKGGKT 152