Miyakogusa Predicted Gene

Lj3g3v2993390.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2993390.1 Non Chatacterized Hit- tr|B9SCV1|B9SCV1_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,69.23,0.000000000000003,Q6YZI4_ORYSA_Q6YZI4;,NULL;
seg,NULL,CUFF.45083.1
         (77 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g09600.2                                                        95   2e-20
Glyma12g09600.1                                                        95   2e-20
Glyma11g18870.1                                                        92   1e-19

>Glyma12g09600.2 
          Length = 115

 Score = 94.7 bits (234), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 47/54 (87%), Positives = 50/54 (92%)

Query: 1  MATRVAARFISRRPFSSGSGKILSEEEKAAENAYFKKVEQEKLEKVARQGPQPE 54
          MA RVAAR+ SRR FSSGSGKILSEEEKAAENAYFKK EQEKLEK+AR+GPQPE
Sbjct: 1  MAARVAARYGSRRLFSSGSGKILSEEEKAAENAYFKKAEQEKLEKLARKGPQPE 54


>Glyma12g09600.1 
          Length = 115

 Score = 94.7 bits (234), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 47/54 (87%), Positives = 50/54 (92%)

Query: 1  MATRVAARFISRRPFSSGSGKILSEEEKAAENAYFKKVEQEKLEKVARQGPQPE 54
          MA RVAAR+ SRR FSSGSGKILSEEEKAAENAYFKK EQEKLEK+AR+GPQPE
Sbjct: 1  MAARVAARYGSRRLFSSGSGKILSEEEKAAENAYFKKAEQEKLEKLARKGPQPE 54


>Glyma11g18870.1 
          Length = 115

 Score = 92.0 bits (227), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 46/54 (85%), Positives = 49/54 (90%)

Query: 1  MATRVAARFISRRPFSSGSGKILSEEEKAAENAYFKKVEQEKLEKVARQGPQPE 54
          MA RVAAR+ SRR FSSGSGKILSEEEKAAENAYFKK EQEKLEK+AR+GPQ E
Sbjct: 1  MAARVAARYGSRRLFSSGSGKILSEEEKAAENAYFKKAEQEKLEKLARKGPQSE 54