Miyakogusa Predicted Gene

Lj3g3v2991350.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2991350.1 Non Chatacterized Hit- tr|J3LGH4|J3LGH4_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB02G3,35.25,0.00000000005, ,gene.g50067.t1.1
         (252 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g05920.1                                                        54   2e-07
Glyma13g41690.1                                                        52   5e-07
Glyma15g03720.1                                                        52   5e-07
Glyma11g13950.1                                                        50   2e-06

>Glyma12g05920.1 
          Length = 487

 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 8/99 (8%)

Query: 134 SKFGFKV----QGFMCISSVMTDSS----ADRAGLRELHEEASANGFLLVISRLEGKSTM 185
           +K GF +    +GF+ I +V+ D+     A R+GL  L++ A     LLV+SRL  +  +
Sbjct: 303 AKLGFAISRTEEGFIFIQTVIEDNQENVPATRSGLSNLYKAAKDTSKLLVVSRLSNQRVL 362

Query: 186 PTSVCSSGLVHCCDHAEIKDSLTSAIDQYEMIQLHVMAW 224
           P  V S+G + C D   +   L+        I LHV  W
Sbjct: 363 PWMVSSTGAIRCYDTVSLSQKLSLHRHTKVPILLHVFLW 401


>Glyma13g41690.1 
          Length = 458

 Score = 52.0 bits (123), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 6/97 (6%)

Query: 134 SKFGFKV----QGFMCISSVMTDSS--ADRAGLRELHEEASANGFLLVISRLEGKSTMPT 187
           +K GF +    +GF+ ISSV+   +  A R+GL  L++ A+    +LV+SR+  +  +P 
Sbjct: 302 AKLGFAISRTEEGFIFISSVINQENVPATRSGLSNLYKLATDTCRMLVVSRVSNQKVLPW 361

Query: 188 SVCSSGLVHCCDHAEIKDSLTSAIDQYEMIQLHVMAW 224
            V S+G + C D   +   L+        I LHV  W
Sbjct: 362 MVSSTGAIRCYDTVSLSQKLSLHRHTRVPILLHVFLW 398


>Glyma15g03720.1 
          Length = 482

 Score = 52.0 bits (123), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 38/124 (30%), Positives = 57/124 (45%), Gaps = 10/124 (8%)

Query: 134 SKFGFKV----QGFMCISSVMTDSS--ADRAGLRELHEEASANGFLLVISRLEGKSTMPT 187
           +K GF +    +GF+ ISSV+   +  A R+GL  L++ A+    +LV+SR+  +  +P 
Sbjct: 302 AKLGFAISRTEEGFIFISSVINQENVPAARSGLSNLYKLATDTCRMLVVSRVSNQKVLPW 361

Query: 188 SVCSSGLVHCCDHAEIKDSLTSAIDQYEMIQLHVMAWPNQTHPSPSKVVGFAAL----LP 243
            V S+G + C D   +   L+        I LHV  W      S      F AL    LP
Sbjct: 362 MVSSTGAIRCYDTVSLSQKLSLHRHTRVPILLHVFLWDRNLVSSSGGSSRFRALSSSVLP 421

Query: 244 PQGS 247
              S
Sbjct: 422 SHAS 425


>Glyma11g13950.1 
          Length = 481

 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 47/99 (47%), Gaps = 8/99 (8%)

Query: 134 SKFGFKV----QGFMCISSVMTDSS----ADRAGLRELHEEASANGFLLVISRLEGKSTM 185
           +K GF +    +GF+ I +V+ D      A R+GL  L++ A     LLV+S L  +  +
Sbjct: 302 TKLGFAISRTEEGFIFIQTVIEDDQENVPATRSGLSNLYKAAKDASKLLVVSNLSNQRVL 361

Query: 186 PTSVCSSGLVHCCDHAEIKDSLTSAIDQYEMIQLHVMAW 224
           P  V S+G + C D   +   L+        I LHV  W
Sbjct: 362 PWMVSSTGAIRCYDTVSLSQKLSLHRHTKVPILLHVFLW 400