Miyakogusa Predicted Gene

Lj3g3v2970750.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2970750.1 tr|Q9FMS3|Q9FMS3_ARATH At5g22280 OS=Arabidopsis
thaliana GN=At5g22280/MWD9.6 PE=4 SV=1,52.04,2e-19,coiled-coil,NULL;
seg,NULL,CUFF.45037.1
         (105 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g31220.1                                                       124   2e-29
Glyma13g39080.2                                                       122   1e-28
Glyma13g39080.1                                                       122   1e-28
Glyma12g31220.2                                                       115   2e-26

>Glyma12g31220.1 
          Length = 108

 Score =  124 bits (312), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 64/100 (64%), Positives = 73/100 (73%)

Query: 1   MSRAMXXXXXXXXXXTTSQFEWKQQLGVDGDSNSSISKKHHRGSKEVESVKEKIILVQEQ 60
           MSR M           TSQFEWKQQL  D DSN S+S+K H+ SK  E+VKEKIILVQE+
Sbjct: 1   MSRPMLLVFLLIILIITSQFEWKQQLVADVDSNPSVSQKQHQISKAGETVKEKIILVQEK 60

Query: 61  NIRRLSELVRHLQEQLKLCRSNNGTKNGTESPKAERVFDL 100
           NIRRL+ELVRHLQEQL+ CR  NGT NGT SP AER+ +L
Sbjct: 61  NIRRLNELVRHLQEQLQQCRGRNGTINGTVSPLAERILEL 100


>Glyma13g39080.2 
          Length = 108

 Score =  122 bits (305), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 62/100 (62%), Positives = 72/100 (72%)

Query: 1   MSRAMXXXXXXXXXXTTSQFEWKQQLGVDGDSNSSISKKHHRGSKEVESVKEKIILVQEQ 60
           MSR M           TSQFEWKQQL  D DSN ++ +K H+ SK  E+VKEKIILVQE+
Sbjct: 1   MSRPMLLVFLLIILIITSQFEWKQQLVADVDSNPNLPQKQHQISKAEETVKEKIILVQEK 60

Query: 61  NIRRLSELVRHLQEQLKLCRSNNGTKNGTESPKAERVFDL 100
           NIRRL+ELVRHLQEQL+ CR  NGT NGT SP AER+ +L
Sbjct: 61  NIRRLNELVRHLQEQLQQCRGRNGTINGTVSPLAERILEL 100


>Glyma13g39080.1 
          Length = 108

 Score =  122 bits (305), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 62/100 (62%), Positives = 72/100 (72%)

Query: 1   MSRAMXXXXXXXXXXTTSQFEWKQQLGVDGDSNSSISKKHHRGSKEVESVKEKIILVQEQ 60
           MSR M           TSQFEWKQQL  D DSN ++ +K H+ SK  E+VKEKIILVQE+
Sbjct: 1   MSRPMLLVFLLIILIITSQFEWKQQLVADVDSNPNLPQKQHQISKAEETVKEKIILVQEK 60

Query: 61  NIRRLSELVRHLQEQLKLCRSNNGTKNGTESPKAERVFDL 100
           NIRRL+ELVRHLQEQL+ CR  NGT NGT SP AER+ +L
Sbjct: 61  NIRRLNELVRHLQEQLQQCRGRNGTINGTVSPLAERILEL 100


>Glyma12g31220.2 
          Length = 100

 Score =  115 bits (287), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 57/81 (70%), Positives = 66/81 (81%)

Query: 20  FEWKQQLGVDGDSNSSISKKHHRGSKEVESVKEKIILVQEQNIRRLSELVRHLQEQLKLC 79
           FEWKQQL  D DSN S+S+K H+ SK  E+VKEKIILVQE+NIRRL+ELVRHLQEQL+ C
Sbjct: 12  FEWKQQLVADVDSNPSVSQKQHQISKAGETVKEKIILVQEKNIRRLNELVRHLQEQLQQC 71

Query: 80  RSNNGTKNGTESPKAERVFDL 100
           R  NGT NGT SP AER+ +L
Sbjct: 72  RGRNGTINGTVSPLAERILEL 92