Miyakogusa Predicted Gene
- Lj3g3v2949670.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v2949670.2 tr|G7JH96|G7JH96_MEDTR Transcription factor E2F
OS=Medicago truncatula GN=MTR_4g052000 PE=3 SV=1,79.53,0,E2F-DP
heterodimerization region,NULL; "Winged helix" DNA-binding
domain,NULL; seg,NULL; no descript,CUFF.45032.2
(293 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma12g09860.1 432 e-121
Glyma02g35850.1 311 6e-85
Glyma10g09410.1 293 2e-79
Glyma11g18400.1 238 5e-63
Glyma06g02740.1 206 3e-53
Glyma04g02720.2 205 6e-53
Glyma04g02720.1 205 6e-53
Glyma02g35850.2 194 1e-49
Glyma05g01760.1 67 2e-11
Glyma17g10130.2 65 1e-10
Glyma17g10130.1 64 1e-10
Glyma06g19840.1 64 2e-10
Glyma16g19460.1 57 2e-08
>Glyma12g09860.1
Length = 450
Score = 432 bits (1112), Expect = e-121, Method: Compositional matrix adjust.
Identities = 219/283 (77%), Positives = 233/283 (82%), Gaps = 14/283 (4%)
Query: 16 QIMHSMKRQLPFVA-----AASGDYHRFTPDRRRNPDQVAEAIVVKTPQLKRKNEAADFE 70
QIMHSMKRQLPF + A+GDYHR AEAIVVKTP LKRK+E ADFE
Sbjct: 15 QIMHSMKRQLPFSSMKPPFVAAGDYHRH---------DAAEAIVVKTPLLKRKSEVADFE 65
Query: 71 ADSGDRMNPGSTETAISPFQTPLXXXXXXXXXXXRLTKCIKSATQTPGPNIGSPSANNLT 130
ADSGDRM G TE A SPFQTP+ RLTK + TQTPG NIGSP+ +NLT
Sbjct: 66 ADSGDRMTAGFTEAANSPFQTPVSGKTGKGGKSSRLTKGNRVGTQTPGSNIGSPAGSNLT 125
Query: 131 PAGSCRYDSSLGLLTKKFINLIKQAEDGMLDLNKAAETLEVQKRRIYDITNVLEGIGLIE 190
PAG CRYDSSLGLLTKKFINLIKQAEDG+LDLNKAA+TLEVQKRRIYDITNVLEGIGLIE
Sbjct: 126 PAGPCRYDSSLGLLTKKFINLIKQAEDGILDLNKAADTLEVQKRRIYDITNVLEGIGLIE 185
Query: 191 KKLKNRIQWKGLDVSRPGQGDDSFGSLQTEVENLTIEERQLDEQIREMQERLRDLSEDEN 250
KKLKNRIQWKGLDVSRPG+ DDSF SLQ EVENLT++ERQLDEQIREMQERLRDLSEDEN
Sbjct: 186 KKLKNRIQWKGLDVSRPGEADDSFASLQAEVENLTMKERQLDEQIREMQERLRDLSEDEN 245
Query: 251 NEKLLFVTEEDIKKLPGFQNETLIAIKAPHGTTLEVPDPDEVI 293
N+KLLFVTEEDIK LP FQNETLIAIKAPHGTTLEVPDPDE +
Sbjct: 246 NDKLLFVTEEDIKNLPCFQNETLIAIKAPHGTTLEVPDPDEAV 288
>Glyma02g35850.1
Length = 468
Score = 311 bits (797), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 173/285 (60%), Positives = 204/285 (71%), Gaps = 18/285 (6%)
Query: 21 MKRQLPFVA----AASGDYHRFT-PDRRRNPDQVAEAIVVKTPQLKRKNEAADFEADSGD 75
+KR L FV A +YH F+ D RR D EA+VV++P +KRK+ D E +S
Sbjct: 27 LKRHLAFVTKPPFAPPDEYHSFSSADSRRAAD---EAVVVRSPYMKRKSGMTDSEGESQA 83
Query: 76 RM---NPGSTE----TAISPFQTPLXXXXXXXXXXXRLTKCIKSATQTPGPNIGSPSANN 128
+ +PG T T SPF+TP+ + +K +S TP N GSPS
Sbjct: 84 QKWSNSPGYTNVSNVTNNSPFKTPVSAKGGRAQKA-KASKEGRSCPPTPMSNAGSPSP-- 140
Query: 129 LTPAGSCRYDSSLGLLTKKFINLIKQAEDGMLDLNKAAETLEVQKRRIYDITNVLEGIGL 188
LTPA SCRYDSSLGLLTKKFINL+K AEDG+LDLNKAAETLEVQKRRIYDITNVLEGIGL
Sbjct: 141 LTPASSCRYDSSLGLLTKKFINLVKHAEDGILDLNKAAETLEVQKRRIYDITNVLEGIGL 200
Query: 189 IEKKLKNRIQWKGLDVSRPGQGDDSFGSLQTEVENLTIEERQLDEQIREMQERLRDLSED 248
IEKKLKNRI WKG++ S G+ D L+ EVE L++EE+ LD+QIREMQERLR+LSE+
Sbjct: 201 IEKKLKNRIHWKGIESSTSGEVDGDISVLKAEVEKLSLEEQGLDDQIREMQERLRNLSEN 260
Query: 249 ENNEKLLFVTEEDIKKLPGFQNETLIAIKAPHGTTLEVPDPDEVI 293
ENN+K LFVTEEDIK LP FQNETLIAIKAPHGTTLEVPDP+E +
Sbjct: 261 ENNQKCLFVTEEDIKGLPCFQNETLIAIKAPHGTTLEVPDPEEAV 305
>Glyma10g09410.1
Length = 466
Score = 293 bits (749), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 168/286 (58%), Positives = 201/286 (70%), Gaps = 20/286 (6%)
Query: 21 MKRQLPFVA----AASGDYHRFTP-DRRRNPDQVAEAIVVKTPQ-LKRKNEAADFEADSG 74
+KR L F+ A +YH F+ RR D EA+VV++P +KRK+ D E +S
Sbjct: 27 LKRHLAFITKPPFAPPDEYHSFSSIGSRRAAD---EAVVVRSPYIMKRKSGMNDSEGESL 83
Query: 75 DRM---NPGSTE----TAISPFQTPLXXXXXXXXXXXRLTKCIKSATQTPGPNIGSPSAN 127
+ +PG T T SPF+TP+ + +K +S TP N GSPS
Sbjct: 84 AQKWSNSPGYTNVSNVTNNSPFKTPVSAKGGRTQKA-KASKG-RSCPPTPISNAGSPSP- 140
Query: 128 NLTPAGSCRYDSSLGLLTKKFINLIKQAEDGMLDLNKAAETLEVQKRRIYDITNVLEGIG 187
LTPA SCRYDSSLGLLTKKFINL+K AE G+LDLNKAAETLEVQKRRIYDITNVLEGIG
Sbjct: 141 -LTPASSCRYDSSLGLLTKKFINLVKHAEGGILDLNKAAETLEVQKRRIYDITNVLEGIG 199
Query: 188 LIEKKLKNRIQWKGLDVSRPGQGDDSFGSLQTEVENLTIEERQLDEQIREMQERLRDLSE 247
LIEKKLKNRI WKG++ + G D L+ EVE L++EE+ +D+QIREMQERLR+LSE
Sbjct: 200 LIEKKLKNRIHWKGIESATSGDVDGDISLLKAEVEKLSLEEQGIDDQIREMQERLRNLSE 259
Query: 248 DENNEKLLFVTEEDIKKLPGFQNETLIAIKAPHGTTLEVPDPDEVI 293
+ENN+K LFVTEEDIK LP FQNETLIAIKAPHGTTLEVPDP+E +
Sbjct: 260 NENNQKCLFVTEEDIKDLPCFQNETLIAIKAPHGTTLEVPDPEEAV 305
>Glyma11g18400.1
Length = 296
Score = 238 bits (608), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 122/151 (80%), Positives = 128/151 (84%), Gaps = 17/151 (11%)
Query: 143 LLTKKFINLIKQAEDGMLDLNKAAETLEVQKRRIYDITNVLEGIGLIEKKLKNRIQWKGL 202
LLTKKFINLIKQAEDG+LDLNKAA+TLEVQKRRIYDITNVLEGIGLIEKKLKNRIQWKGL
Sbjct: 1 LLTKKFINLIKQAEDGILDLNKAADTLEVQKRRIYDITNVLEGIGLIEKKLKNRIQWKGL 60
Query: 203 DVSRPGQGDDSFGSLQTEVENLTIEERQLDEQIREMQERLRDLSEDENNEKLLFVTEEDI 262
DVSRPG+ DDSF SLQ EVENLT++ERQLDEQIR LLFVTEEDI
Sbjct: 61 DVSRPGEADDSFPSLQAEVENLTMKERQLDEQIR-----------------LLFVTEEDI 103
Query: 263 KKLPGFQNETLIAIKAPHGTTLEVPDPDEVI 293
K LP FQNETLIAIKAPHGTTLEVPDPDE +
Sbjct: 104 KNLPCFQNETLIAIKAPHGTTLEVPDPDEAV 134
>Glyma06g02740.1
Length = 325
Score = 206 bits (523), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 103/174 (59%), Positives = 131/174 (75%)
Query: 118 GPNIGSPSANNLTPAGSCRYDSSLGLLTKKFINLIKQAEDGMLDLNKAAETLEVQKRRIY 177
G + G +A + +CRYDSSLGLLTKKF++LI+ A+DG LDLN+ AE LEVQKRRIY
Sbjct: 57 GKSKGPRNAKSANAVNNCRYDSSLGLLTKKFVSLIQDAKDGTLDLNRTAEILEVQKRRIY 116
Query: 178 DITNVLEGIGLIEKKLKNRIQWKGLDVSRPGQGDDSFGSLQTEVENLTIEERQLDEQIRE 237
DITNVLEG+GLIEK KN IQWKG D P + +D SL+ EV++L EE +LD+ IR+
Sbjct: 117 DITNVLEGVGLIEKTSKNHIQWKGCDGLGPQELEDQVNSLKAEVDSLYAEESELDDCIRK 176
Query: 238 MQERLRDLSEDENNEKLLFVTEEDIKKLPGFQNETLIAIKAPHGTTLEVPDPDE 291
QE LR+L E E+++K LF+T+EDI LP FQN+ +IAIKAP + +EVPDPDE
Sbjct: 177 KQELLRNLEESESSQKYLFLTKEDILSLPCFQNQEIIAIKAPKASCIEVPDPDE 230
>Glyma04g02720.2
Length = 343
Score = 205 bits (521), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 105/181 (58%), Positives = 134/181 (74%), Gaps = 5/181 (2%)
Query: 111 KSATQTPGPNIGSPSANNLTPAGSCRYDSSLGLLTKKFINLIKQAEDGMLDLNKAAETLE 170
KSA P + + N T +CRYDSSLGLLTKKF++LI+ A+DG LDLN+ AE LE
Sbjct: 54 KSAAHRPYAD-----STNSTAVNNCRYDSSLGLLTKKFVSLIQDAKDGTLDLNRTAEILE 108
Query: 171 VQKRRIYDITNVLEGIGLIEKKLKNRIQWKGLDVSRPGQGDDSFGSLQTEVENLTIEERQ 230
VQKRRIYDITNVLEG+GLIEK KN I+WKG D P + +D SL+ EV++L EE +
Sbjct: 109 VQKRRIYDITNVLEGVGLIEKTSKNHIKWKGCDGLGPRELEDQVNSLKAEVDSLYAEECK 168
Query: 231 LDEQIREMQERLRDLSEDENNEKLLFVTEEDIKKLPGFQNETLIAIKAPHGTTLEVPDPD 290
LD+ IR+ QE LR+L E E+++K LF+T+EDI LP FQN+ +IAIKAP +++EVPDPD
Sbjct: 169 LDDCIRKKQELLRNLEESESSQKYLFITKEDILGLPCFQNQEIIAIKAPKASSIEVPDPD 228
Query: 291 E 291
E
Sbjct: 229 E 229
>Glyma04g02720.1
Length = 343
Score = 205 bits (521), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 105/181 (58%), Positives = 134/181 (74%), Gaps = 5/181 (2%)
Query: 111 KSATQTPGPNIGSPSANNLTPAGSCRYDSSLGLLTKKFINLIKQAEDGMLDLNKAAETLE 170
KSA P + + N T +CRYDSSLGLLTKKF++LI+ A+DG LDLN+ AE LE
Sbjct: 54 KSAAHRPYAD-----STNSTAVNNCRYDSSLGLLTKKFVSLIQDAKDGTLDLNRTAEILE 108
Query: 171 VQKRRIYDITNVLEGIGLIEKKLKNRIQWKGLDVSRPGQGDDSFGSLQTEVENLTIEERQ 230
VQKRRIYDITNVLEG+GLIEK KN I+WKG D P + +D SL+ EV++L EE +
Sbjct: 109 VQKRRIYDITNVLEGVGLIEKTSKNHIKWKGCDGLGPRELEDQVNSLKAEVDSLYAEECK 168
Query: 231 LDEQIREMQERLRDLSEDENNEKLLFVTEEDIKKLPGFQNETLIAIKAPHGTTLEVPDPD 290
LD+ IR+ QE LR+L E E+++K LF+T+EDI LP FQN+ +IAIKAP +++EVPDPD
Sbjct: 169 LDDCIRKKQELLRNLEESESSQKYLFITKEDILGLPCFQNQEIIAIKAPKASSIEVPDPD 228
Query: 291 E 291
E
Sbjct: 229 E 229
>Glyma02g35850.2
Length = 421
Score = 194 bits (493), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 125/258 (48%), Positives = 146/258 (56%), Gaps = 47/258 (18%)
Query: 60 LKRKNEAADFEADSGDRM---NPGSTE----TAISPFQTPLXXXXXXXXXXXRLTKCIKS 112
+KRK+ D E +S + +PG T T SPF+TP+ K K
Sbjct: 24 MKRKSGMTDSEGESQAQKWSNSPGYTNVSNVTNNSPFKTPVSAKGGRAQK----AKASKE 79
Query: 113 ATQTPGPNIGSPS-----ANNLTPAGSCRYDSSLGLLTKKFINLIKQAEDGMLDLNKAAE 167
P I P NNL P + +TK FINL+K AEDG+LDLNKAAE
Sbjct: 80 GRSCPPTPIIPPEKFLVLGNNLCPKYKFYFREKR--MTKSFINLVKHAEDGILDLNKAAE 137
Query: 168 TLEVQKRRIYDITNVLEGIGLIEKKLKNRIQWK------------GLDVSRPGQGDDSFG 215
TLEVQKRRIYDITNVLEGIGLIEKKLKNRI WK G++ S G+ D
Sbjct: 138 TLEVQKRRIYDITNVLEGIGLIEKKLKNRIHWKYCDTFLIFLLCMGIESSTSGEVDGDIS 197
Query: 216 SLQTEVENLTIEERQLDEQIREMQERLRDLSEDENNEKLLFVTEEDIKKLPGFQNETLIA 275
L+ EVE L++EE+ LD+QIR LFVTEEDIK LP FQNETLIA
Sbjct: 198 VLKAEVEKLSLEEQGLDDQIR-----------------CLFVTEEDIKGLPCFQNETLIA 240
Query: 276 IKAPHGTTLEVPDPDEVI 293
IKAPHGTTLEVPDP+E +
Sbjct: 241 IKAPHGTTLEVPDPEEAV 258
>Glyma05g01760.1
Length = 403
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 47/75 (62%), Gaps = 3/75 (4%)
Query: 131 PAGSCRYD---SSLGLLTKKFINLIKQAEDGMLDLNKAAETLEVQKRRIYDITNVLEGIG 187
P+ C Y+ SLGLL F++L + ++ L+ AA L V++RRIYDI NVLE IG
Sbjct: 8 PSRHCTYNRKQKSLGLLCTNFLSLYDRGSVHLIGLDDAAIRLGVERRRIYDIVNVLESIG 67
Query: 188 LIEKKLKNRIQWKGL 202
L+ +K KN+ W+G
Sbjct: 68 LLSRKAKNQYIWRGF 82
>Glyma17g10130.2
Length = 354
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 43/67 (64%)
Query: 136 RYDSSLGLLTKKFINLIKQAEDGMLDLNKAAETLEVQKRRIYDITNVLEGIGLIEKKLKN 195
R SLGLL F++L + ++ L+ AA L V++RRIYDI NVLE IG++ +K KN
Sbjct: 16 RKQKSLGLLCTNFLSLYNRDTVHLIGLDDAATRLGVERRRIYDIVNVLESIGVLSRKAKN 75
Query: 196 RIQWKGL 202
+ W+G
Sbjct: 76 QYTWRGF 82
>Glyma17g10130.1
Length = 380
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 43/67 (64%)
Query: 136 RYDSSLGLLTKKFINLIKQAEDGMLDLNKAAETLEVQKRRIYDITNVLEGIGLIEKKLKN 195
R SLGLL F++L + ++ L+ AA L V++RRIYDI NVLE IG++ +K KN
Sbjct: 16 RKQKSLGLLCTNFLSLYNRDTVHLIGLDDAATRLGVERRRIYDIVNVLESIGVLSRKAKN 75
Query: 196 RIQWKGL 202
+ W+G
Sbjct: 76 QYTWRGF 82
>Glyma06g19840.1
Length = 213
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 43/67 (64%)
Query: 136 RYDSSLGLLTKKFINLIKQAEDGMLDLNKAAETLEVQKRRIYDITNVLEGIGLIEKKLKN 195
R SLGLL F++L + ++ L+ AA L V++RRIYDI NVLE +G++ +K KN
Sbjct: 12 RKQKSLGLLCTNFLSLYNKEGVRLVGLDDAASRLGVERRRIYDIVNVLESVGVLTRKAKN 71
Query: 196 RIQWKGL 202
+ WKG
Sbjct: 72 QYTWKGF 78
>Glyma16g19460.1
Length = 224
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 31/41 (75%)
Query: 253 KLLFVTEEDIKKLPGFQNETLIAIKAPHGTTLEVPDPDEVI 293
+ LF+ +EDI LP FQN+ +IAIKAP + +EVPDPDE +
Sbjct: 120 RYLFLIKEDILSLPCFQNQEIIAIKAPKASCIEVPDPDEAV 160