Miyakogusa Predicted Gene

Lj3g3v2927350.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2927350.1 tr|B9PDN9|B9PDN9_POPTR Predicted protein
(Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_795522
PE=4,44.63,7e-18,seg,NULL; coiled-coil,NULL,CUFF.45013.1
         (281 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g17900.1                                                       440   e-124
Glyma12g10170.1                                                       435   e-122

>Glyma11g17900.1 
          Length = 285

 Score =  440 bits (1132), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 227/294 (77%), Positives = 249/294 (84%), Gaps = 22/294 (7%)

Query: 1   MRRQGQYGDPSANTYAAS-QMHHMAGQRAETKSGSFEGRLEAFTPERENPYANSKPEGQW 59
           MRRQG YGDPSANT     QMHHMAGQR E KSG+FEGRLEAFTPERENPY NSKPEGQW
Sbjct: 1   MRRQGHYGDPSANTCVGGGQMHHMAGQRGEAKSGNFEGRLEAFTPERENPYGNSKPEGQW 60

Query: 60  RWEVDESKMSNSMTSRVYNEGQGGDASRSYYQGQRPDPKLNLQNRSNSESRSQAHEEDMD 119
           RWE+DESKMSNSM SR++NEGQG DAS+ Y+QGQ         +R+NS+SRSQAHEEDMD
Sbjct: 61  RWEMDESKMSNSMASRMFNEGQGVDASKPYFQGQ---------SRNNSDSRSQAHEEDMD 111

Query: 120 VGYEGAHLSQTFEGLEKNFHDDIMKLTKEQDDAEDAEHARHREKINAINTQYEEKLAALR 179
           V YEG HLSQ+FEGLE+NFHDDI+KLTKEQ+DAEDAE+ARHREKINAIN QYEEKLAALR
Sbjct: 112 VRYEGEHLSQSFEGLEQNFHDDIIKLTKEQNDAEDAEYARHREKINAINAQYEEKLAALR 171

Query: 180 ARHSNRRADFLQRESNVRQQQYEQIIRDPYPSSGM------------PPREPHGYSNVDV 227
           A+HS+RRA+FLQRES+ RQQQY+QIIRDPYP  GM             PR+PHGY+NV+ 
Sbjct: 172 AQHSSRRAEFLQRESHARQQQYQQIIRDPYPGGGMAPRDPHAPRDPHAPRDPHGYNNVND 231

Query: 228 SPAGGEVQRGYSADHFDPYRERARFLASGRDQGFETRGPYPGGRVYDTGSRYYN 281
           S AGGEVQRGYSADHFDPYRERARFL  GRDQGFE RGPYPGGRVYDTGSRYYN
Sbjct: 232 SGAGGEVQRGYSADHFDPYRERARFLGGGRDQGFEPRGPYPGGRVYDTGSRYYN 285


>Glyma12g10170.1 
          Length = 274

 Score =  435 bits (1118), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 223/284 (78%), Positives = 247/284 (86%), Gaps = 13/284 (4%)

Query: 1   MRRQGQYGDPSANTYAA-SQMHHMAGQRAETKSGSFEGRLEAFTPERENPYANSKPEGQ- 58
           MRRQG YGDPSANT    SQMHHMAGQR E KSG+FEGRLEAFTP+RENPYANSK EGQ 
Sbjct: 1   MRRQGHYGDPSANTCVGGSQMHHMAGQRGEAKSGNFEGRLEAFTPQRENPYANSKQEGQG 60

Query: 59  -WRWEVDESKMSNSMTSRVYNEGQGGDASRSYYQGQRPDPKLNLQNRSNSESRSQAHEED 117
            WRWE+DE+KMSNSM SR++NEGQG DAS+SY+QG          +R+NS+SRSQAH ED
Sbjct: 61  QWRWEIDEAKMSNSMASRMFNEGQGVDASKSYFQGP---------SRNNSDSRSQAHGED 111

Query: 118 MDVGYEGAHLSQTFEGLEKNFHDDIMKLTKEQDDAEDAEHARHREKINAINTQYEEKLAA 177
           MDVGYEG HLSQ+FEGLE+NFHDDI+KLTKEQ+DAEDAE+ARHREKINAIN QYEEKLAA
Sbjct: 112 MDVGYEGNHLSQSFEGLEQNFHDDIIKLTKEQNDAEDAEYARHREKINAINAQYEEKLAA 171

Query: 178 LRARHSNRRADFLQRESNVRQQQYEQIIRDPYPSSGMPPREPHGYSNVDVSPAGGEVQRG 237
           LRA+HS+RRA+FLQRES+ RQQQY+QIIRDPYPS GM P +PHGY+NV+ S   GEVQRG
Sbjct: 172 LRAQHSSRRAEFLQRESHARQQQYQQIIRDPYPSGGMAPGDPHGYNNVNASGT-GEVQRG 230

Query: 238 YSADHFDPYRERARFLASGRDQGFETRGPYPGGRVYDTGSRYYN 281
           YSADH DPYRERARFL  GRDQGFE RGPYPGGRVYDTGSRYYN
Sbjct: 231 YSADHLDPYRERARFLGGGRDQGFEPRGPYPGGRVYDTGSRYYN 274