Miyakogusa Predicted Gene

Lj3g3v2923170.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2923170.1 tr|I1LRN4|I1LRN4_SOYBN Condensin complex subunit
2 OS=Glycine max PE=3 SV=1,78.89,0,Cnd2,Condensin complex subunit
2/barren; GB DEF: HYPOTHETICAL PROTEIN AT2G32590,NULL; FAMILY NOT
NAM,CUFF.44994.1
         (671 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g46480.1                                                      1043   0.0  
Glyma12g10280.1                                                      1036   0.0  
Glyma12g31760.1                                                       616   e-176
Glyma13g38670.1                                                       136   9e-32

>Glyma06g46480.1 
          Length = 670

 Score = 1043 bits (2696), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 524/676 (77%), Positives = 574/676 (84%), Gaps = 11/676 (1%)

Query: 1   MAETLSPNPALGQKQRLPVAARIQSPTSPFFLGSNDDQLEXXXXXXXXXXXXXXKGLAVS 60
           MAETLSPNPA+G+KQRL    RIQSPTSPF LGSN+DQLE              K LA++
Sbjct: 1   MAETLSPNPAMGRKQRL----RIQSPTSPFVLGSNNDQLERARARDARAAANRRKSLALN 56

Query: 61  QSFNSDADPCLNKQQILDLFQNCIKLASENKINQKNTWELNLIDHLTDIIKAEDEPDAET 120
           Q   +++ P LNKQQILDLFQNCIKLASENKINQKNTWELNLIDHLTDIIKAE+E DAET
Sbjct: 57  QPLQANSHPGLNKQQILDLFQNCIKLASENKINQKNTWELNLIDHLTDIIKAEEEHDAET 116

Query: 121 NFQKASCTLEAGVKIYSLRVDSVHSEAYKVLGGMNRAGQDAEE----DTTAEGDNIESGQ 176
           NFQKASCTLEAGVKIYSLRVDSVHSEAYKVLGGMNRAGQ+AEE    DTT +G NIES Q
Sbjct: 117 NFQKASCTLEAGVKIYSLRVDSVHSEAYKVLGGMNRAGQEAEEAMMPDTTLDGVNIESRQ 176

Query: 177 EGNRKETDKKLSPLSTLEPSFEALNVKKFDAAFVVDPLYRQTTAKFDEGGAKGLLMNNLG 236
           E +RKET KKLSPLSTLE SFEALNVKKFDAAFVVDPLYRQTTAKFDEGGAKGLLMNNLG
Sbjct: 177 EESRKETSKKLSPLSTLESSFEALNVKKFDAAFVVDPLYRQTTAKFDEGGAKGLLMNNLG 236

Query: 237 VYGGCRVLFDSQEVPAKCMEGQNRQDISDSIDLSFLRDCIEQMLLDIHVKDEISPTLSII 296
           VYGGCRVLFDSQEVPAKCM  QN+ DISD+IDLSFL+DCI+QM+LD+ VKDEISP+L  I
Sbjct: 237 VYGGCRVLFDSQEVPAKCMASQNQSDISDTIDLSFLKDCIDQMVLDMRVKDEISPSLRTI 296

Query: 297 VNQFDEKNRRPTDFQLHGQNSAEEFDADVNCENGADREEYENCTTWNXXXXXXXXXXXLG 356
           VNQFDE NRRPTD QL G +SAE+ D   N ENG DREEYENCT W+           L 
Sbjct: 297 VNQFDESNRRPTDIQLQGPSSAEDLDNADNNENGFDREEYENCTAWSDDHDDQTVVADLD 356

Query: 357 SNDADPSFPNYPQEN-EQFPSPDSDTDERLENVDGYLFLNLGFSSKQNAWAGPDHWKYRK 415
            NDADPSF +YPQ+N EQFPSP++D D+R ENV+GYLFL+LGFSSKQNAWAGPDHWKYRK
Sbjct: 357 YNDADPSFSSYPQDNAEQFPSPETDMDDRFENVEGYLFLSLGFSSKQNAWAGPDHWKYRK 416

Query: 416 SKVSEVQPTSEDGPTLKTKQPRSKKQAEVDLDFTGSLEKNLLDIFAPPKNPKSLLLPESR 475
           SK  EV PTSEDG TLK++QP+SK+Q EVDL+FT SLEK +LD F+PPKNPK LLLPESR
Sbjct: 417 SK--EVHPTSEDGSTLKSRQPKSKRQTEVDLNFTDSLEKKVLDTFSPPKNPKLLLLPESR 474

Query: 476 VPCNTKLPEDCHYQPEDLVKLFLLPNVKCLGRRTKRFSDGSREQSNEYESFPSWDNGSVG 535
           +PCNTKLPEDCHYQPEDLVKLFLL NVKCLGR+  RFSDGSREQSNEYESFPSWDNGSV 
Sbjct: 475 LPCNTKLPEDCHYQPEDLVKLFLLSNVKCLGRKANRFSDGSREQSNEYESFPSWDNGSVC 534

Query: 536 GGESVDYEGDHHSDMEDPGTLISQPRLVNKIEVQYDKTSKQVDVQALKVTLWDHVQESVK 595
           G ++ DY GD HSDMED  TLI+QPR VNKIEVQYDKTSKQVDV ALK+TLWDHVQESVK
Sbjct: 535 GDDAGDYGGDLHSDMEDSNTLITQPRQVNKIEVQYDKTSKQVDVHALKITLWDHVQESVK 594

Query: 596 LTSEGQKEMISFRNMLANFPSECNAASNISDISPHLCFICLLHLANENGLSIQSTPNLDD 655
           L  EGQK+ +SF+N+LANFPSECNAA+ ISDISPHLCFICLLHLANE GLSIQ++ NLDD
Sbjct: 595 LPLEGQKDTLSFKNILANFPSECNAAATISDISPHLCFICLLHLANEKGLSIQNSSNLDD 654

Query: 656 LAIYLPQVGDTISEPV 671
           LAI LPQV D+I   V
Sbjct: 655 LAIRLPQVADSIRGTV 670


>Glyma12g10280.1 
          Length = 666

 Score = 1036 bits (2679), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 517/672 (76%), Positives = 564/672 (83%), Gaps = 7/672 (1%)

Query: 1   MAETLSPNPALGQKQRLPVAARIQSPTSPFFLGSNDDQLEXXXXXXXXXXXXXXKGLAVS 60
           MAETLSPNP + QKQRL    RI SPTSPF LGSNDD+LE              K LA++
Sbjct: 1   MAETLSPNPTMDQKQRL----RILSPTSPFILGSNDDKLERAQARDARATAIRRKSLALN 56

Query: 61  QSFNSDADPCLNKQQILDLFQNCIKLASENKINQKNTWELNLIDHLTDIIKAEDEPDAET 120
           Q    ++DPCLNKQQI+DLFQNCIKLASENKINQKNTWELNLIDHLTDIIKAE+E DAET
Sbjct: 57  QPLQPNSDPCLNKQQIIDLFQNCIKLASENKINQKNTWELNLIDHLTDIIKAEEENDAET 116

Query: 121 NFQKASCTLEAGVKIYSLRVDSVHSEAYKVLGGMNRAGQDAEEDTTAEGDNIESGQEGNR 180
           NFQKASCTLEAGVKIYSLRVDSVHSEAYKVLGGMNRAGQ+AEEDTT  G NIESGQ  +R
Sbjct: 117 NFQKASCTLEAGVKIYSLRVDSVHSEAYKVLGGMNRAGQEAEEDTTLNGVNIESGQVESR 176

Query: 181 KETDKKLSPLSTLEPSFEALNVKKFDAAFVVDPLYRQTTAKFDEGGAKGLLMNNLGVYGG 240
           KET KKLSPLSTLE SFEALNVKKFDAAFVVDPLYRQTTAKFDEGGAKGLLMNNLGVYG 
Sbjct: 177 KETSKKLSPLSTLESSFEALNVKKFDAAFVVDPLYRQTTAKFDEGGAKGLLMNNLGVYGD 236

Query: 241 CRVLFDSQEVPAKCMEGQNRQDISDSIDLSFLRDCIEQMLLDIHVKDEISPTLSIIVNQF 300
           CRVLFDSQEVPAKCM  QN+ DISD+IDLSF +DCI+QM+LD+ VKDEISP+L  IVNQF
Sbjct: 237 CRVLFDSQEVPAKCMASQNQSDISDTIDLSFAKDCIDQMVLDMRVKDEISPSLRTIVNQF 296

Query: 301 DEKNRRPTDFQLHGQNSAEEFDADVNCENGADREEYENCTTWNXXXXXXXXXXXLGSNDA 360
           DE NRRP D QL GQNSAE+ D   N ENG  REEYENC  W+            G NDA
Sbjct: 297 DESNRRPADIQLQGQNSAEDLDNADNNENGFYREEYENCMAWSDDRDDQTVVADPGYNDA 356

Query: 361 DPSFPNYPQEN-EQFPSPDSDTDERLENVDGYLFLNLGFSSKQNAWAGPDHWKYRKSKVS 419
           DPSFP+YPQ+N E FPSP+ D D R ENVDGYLFL+LGFSSKQNAWAGPDHWKYRKSK  
Sbjct: 357 DPSFPSYPQDNDEPFPSPEIDMDGRFENVDGYLFLSLGFSSKQNAWAGPDHWKYRKSK-- 414

Query: 420 EVQPTSEDGPTLKTKQPRSKKQAEVDLDFTGSLEKNLLDIFAPPKNPKSLLLPESRVPCN 479
           EV PTSEDG TLK++QP+SK+Q EVDL+FT SLEK +LD F+PPKNPK LLLPESR+PCN
Sbjct: 415 EVHPTSEDGSTLKSRQPKSKRQTEVDLNFTNSLEKKMLDTFSPPKNPKLLLLPESRLPCN 474

Query: 480 TKLPEDCHYQPEDLVKLFLLPNVKCLGRRTKRFSDGSREQSNEYESFPSWDNGSVGGGES 539
           TKLPEDCHYQPEDLVKLFLL NVKCLGR+  RFSDGSREQS+EYESFPSWDNGSV G ++
Sbjct: 475 TKLPEDCHYQPEDLVKLFLLSNVKCLGRKANRFSDGSREQSDEYESFPSWDNGSVCGDDA 534

Query: 540 VDYEGDHHSDMEDPGTLISQPRLVNKIEVQYDKTSKQVDVQALKVTLWDHVQESVKLTSE 599
            DY GD H DMED  TL++QPR V+KIEVQYDKTSKQVDV ALK+TLWDHVQESVKL  E
Sbjct: 535 GDYGGDLHGDMEDTDTLVTQPRQVSKIEVQYDKTSKQVDVHALKITLWDHVQESVKLPLE 594

Query: 600 GQKEMISFRNMLANFPSECNAASNISDISPHLCFICLLHLANENGLSIQSTPNLDDLAIY 659
           GQK+ +SFRN+LANFPSECNAA+ ISDISPHLCFICLLHLANE GLSIQ++PNLDDLAI 
Sbjct: 595 GQKDTLSFRNILANFPSECNAAATISDISPHLCFICLLHLANEKGLSIQNSPNLDDLAIR 654

Query: 660 LPQVGDTISEPV 671
            PQV D++   V
Sbjct: 655 FPQVADSMRGTV 666


>Glyma12g31760.1 
          Length = 540

 Score =  616 bits (1589), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 334/619 (53%), Positives = 394/619 (63%), Gaps = 105/619 (16%)

Query: 1   MAETLSPNPALGQKQRLPVAARIQSPTSPFFLGSNDDQLEXXXXXXXXXXXXXXKGLAVS 60
           MAE L PNP    K+ +P++ARIQSPTSPFF+GSN+DQLE              K LA +
Sbjct: 1   MAEALGPNPTTDHKKTVPMSARIQSPTSPFFVGSNNDQLERAQTREARAAAIRRKPLAAN 60

Query: 61  -QSFNSDADPCLNKQQILDLFQNCIKLASENKINQKNTWELNLIDHLTDIIKAEDEPDAE 119
                S + PCLNK QILDLF NCIKLASEN                             
Sbjct: 61  FHPQPSHSHPCLNKHQILDLFHNCIKLASEN----------------------------- 91

Query: 120 TNFQKASCTLEAGVKIYSLRVDSVHSEAYKVLGGMNRAGQDAEEDTTAEGDNIESGQEGN 179
                ASCTLEAGVKIYSLRVDSVHSEAYKVL  MNRAGQD EE                
Sbjct: 92  -----ASCTLEAGVKIYSLRVDSVHSEAYKVLARMNRAGQDTEE---------------- 130

Query: 180 RKETDKKLSPLSTLEPSFEALNVKKFDAAFVVDPLYRQTTAKFDEGGAKGLLMNNLGVYG 239
                                       AF VDPLYRQ +A+FDEGGAKGLLMNNLG+YG
Sbjct: 131 ---------------------------VAFAVDPLYRQMSAQFDEGGAKGLLMNNLGIYG 163

Query: 240 GCRVLFDSQEVPAKCMEGQNRQDISDSIDLSFLRDCIEQMLLDIHVKDEISPTLSIIVNQ 299
            CR+LFDS EVP KC+  QN  DISD+IDLSF RDC+EQM+LDIH K EISPTL +IVNQ
Sbjct: 164 KCRLLFDSLEVPGKCITSQNESDISDTIDLSFARDCVEQMILDIHTKGEISPTLRVIVNQ 223

Query: 300 FDEKNRRPTDFQLHGQNSAEEFDADVNCENGADREEYENCTTWNXXXXXXXXXXXLGSND 359
           FDE N+RP+DFQ   + S EEFDA ++ E   ++ EYEN  +W+            GS+D
Sbjct: 224 FDENNKRPSDFQSSTEKSGEEFDAAIDSELATEK-EYENFPSWSNDHDSEAFPAEWGSDD 282

Query: 360 ADPSFPNYPQENEQFPSPD-SDTDERLENVDGYLFLNLGFSSKQNAWAGPDHWKYRKSK- 417
           ADP+FP+Y QE E F S D  D D+  ENVDGYLFL+LGF SK+NAWAG DHWK++K+K 
Sbjct: 283 ADPTFPSYHQEKEPFHSQDPPDMDDIFENVDGYLFLSLGFRSKKNAWAGTDHWKFQKAKG 342

Query: 418 -VSEVQPTSEDGPTLKTKQPRSKKQAEVDLDFTGSLEKNLLDIFAPPKNPKSLLLPESRV 476
             SEV   SED    KT+QP +K+Q EVDLDFT  +EK + DIF+PP+NPKSL LPE+  
Sbjct: 343 SESEVHRASEDVLVQKTRQPGTKRQVEVDLDFTSFVEKKISDIFSPPRNPKSLQLPENIP 402

Query: 477 PCNTKLPEDCHYQPEDLVKLFLLPNVKCLGRRTKR----FSDGSREQSNEYESFPSWDNG 532
           P  TKLPEDCHY+PEDLV LFLLP VKC+GR+ ++    F+D S EQ N YESFPSWDNG
Sbjct: 403 PSITKLPEDCHYEPEDLVNLFLLPYVKCIGRKARKLSGEFADVSGEQCNNYESFPSWDNG 462

Query: 533 SVGGGESVDYEGDHHSDMEDPGTLISQPR---------------LVNKIEVQYDKTSKQV 577
           SV   +  D     HS+M+D  +LISQPR                +NK+EVQYDKT KQV
Sbjct: 463 SVCDDDVTDV----HSEMDDSTSLISQPRQLLQLEHKYDYFQITQINKVEVQYDKTFKQV 518

Query: 578 DVQALKVTLWDHVQESVKL 596
           +VQALK+TLWDH+QESV++
Sbjct: 519 NVQALKITLWDHIQESVQV 537


>Glyma13g38670.1 
          Length = 300

 Score =  136 bits (342), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 89/185 (48%), Positives = 104/185 (56%), Gaps = 34/185 (18%)

Query: 16  RLPVAARIQSPTSPFFLGSNDDQLEXXXXXXXXXXXXXXKGLAVSQSFNS---DADPCLN 72
           R+P++ARIQSPTSPFF+GSNDDQLE              K LA +  F+     + PCLN
Sbjct: 3   RVPMSARIQSPTSPFFMGSNDDQLERAQARAARASAIRRKSLAAN--FHPQPPHSLPCLN 60

Query: 73  KQQILDLFQNCI--------KLASENKI--NQKNT-WELNLIDHLTDIIKAEDEPDAETN 121
           K QI+ L   C+        +  S N I  N K + W+ N                 E+ 
Sbjct: 61  KHQIIFLLHLCVYDMMFLYMQFLSMNAIYTNAKTSLWKANF---------------KESF 105

Query: 122 FQKASCTLEAGVKIYSLRVDSVHSEAYKVLGGMNRAGQDAEEDTTAEGDNIESGQEGNRK 181
           F  ASCTLEAGV IYSLRVDSVHSEAYKVL  MNRA QD E+DTT    N ESGQ  +RK
Sbjct: 106 F--ASCTLEAGVTIYSLRVDSVHSEAYKVLARMNRACQDTEQDTTLGNVNAESGQ-ASRK 162

Query: 182 ETDKK 186
           E  KK
Sbjct: 163 EVGKK 167



 Score = 83.2 bits (204), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 42/95 (44%), Positives = 54/95 (56%), Gaps = 31/95 (32%)

Query: 568 VQYDKTSKQVDVQALKVTLWDHVQESVKLTSEG--------------------------- 600
           +QYDKTSKQV+VQ LK TLWDH+QESV +  +                            
Sbjct: 205 IQYDKTSKQVNVQVLKTTLWDHIQESVHIPIQALPGTVYSLCSYKLEISSPFESSLTKIK 264

Query: 601 ----QKEMISFRNMLANFPSECNAASNISDISPHL 631
               +KE++SF++ML NFPS+CN A+ I DISPHL
Sbjct: 265 CLQHKKEVVSFKHMLTNFPSKCNGAATIIDISPHL 299