Miyakogusa Predicted Gene

Lj3g3v2905120.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2905120.1 Non Chatacterized Hit- tr|O49369|O49369_ARATH
Putative uncharacterized protein AT4g32210
OS=Arabidop,42.64,2e-18,SUCCINATE DEHYDROGENASE CYTOCHROME B560
SUBUNIT,NULL; seg,NULL; Fumarate reductase respiratory
compl,CUFF.45149.1
         (219 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g46180.1                                                       246   2e-65
Glyma12g10590.1                                                       240   9e-64
Glyma06g46190.1                                                        51   8e-07

>Glyma06g46180.1 
          Length = 244

 Score =  246 bits (627), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 133/214 (62%), Positives = 153/214 (71%), Gaps = 24/214 (11%)

Query: 30  PQIGA----------TTAT---GGENTSRGNLTGLPK--------DSNDFSSLRFNAYGL 68
           PQIGA           TAT     EN S GNLTGLPK        DS+  +S R+ A GL
Sbjct: 31  PQIGAISPLPDLFHRNTATMPFAKENASGGNLTGLPKVPANKLGSDSDATNSSRYKASGL 90

Query: 69  DATLLAGARYGTKACAANGPMQMGV---MARSFQRGAGPEPLGLTSHKRFMSDTSSKTTE 125
           +  +LAGARY ++  AA G M +GV   MARSF+R      LG+  HKRFMSD  SKT+E
Sbjct: 91  NTNVLAGARYVSRVWAAQGQMPLGVNTVMARSFERSMEAGTLGMIGHKRFMSDIPSKTSE 150

Query: 126 TKPYGLRPLSPHLPVYQPQLSSTLSIFNRIAGASLAAIIVAFYMIYMKMGLISLTYDSFY 185
           T P G RPLSPHLP+YQPQLSSTLSIFNRIAGA LA +I+ FYMIYMK+GL+SLTYDSFY
Sbjct: 151 TNPSGFRPLSPHLPLYQPQLSSTLSIFNRIAGAFLAGVILVFYMIYMKLGLVSLTYDSFY 210

Query: 186 QFVFYSSKLNLLAIEISALATTYHLYSAIRHLLV 219
           QF+FYSSKLNLL +EISALA +YHLYSAIRHL +
Sbjct: 211 QFIFYSSKLNLLVMEISALAVSYHLYSAIRHLFL 244


>Glyma12g10590.1 
          Length = 249

 Score =  240 bits (612), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 132/214 (61%), Positives = 150/214 (70%), Gaps = 24/214 (11%)

Query: 30  PQIGA----------TTAT---GGENTSRGNLTGLPK--------DSNDFSSLRFNAYGL 68
           PQIGA           TAT     EN S GNL GLPK        DSN  +S R+ A GL
Sbjct: 36  PQIGAISPLPDLFHRNTATMPFAKENASGGNLAGLPKVPANTLGSDSNAINSPRYKASGL 95

Query: 69  DATLLAGARYGTKACAANGPMQM---GVMARSFQRGAGPEPLGLTSHKRFMSDTSSKTTE 125
           D  +LAGAR  +   AA GPM++    VMARSF+R      LG+  HKRFMSD  SKT+E
Sbjct: 96  DTNVLAGARCVSGVWAAQGPMRLVVNTVMARSFERSMEAGTLGMIGHKRFMSDIPSKTSE 155

Query: 126 TKPYGLRPLSPHLPVYQPQLSSTLSIFNRIAGASLAAIIVAFYMIYMKMGLISLTYDSFY 185
           T   G RPLSPHLP+YQPQLSSTLSIFNRIAGA LA +I+ FYMIYMK+GL+SLTYDSFY
Sbjct: 156 TNLSGFRPLSPHLPLYQPQLSSTLSIFNRIAGAFLAGVILLFYMIYMKLGLVSLTYDSFY 215

Query: 186 QFVFYSSKLNLLAIEISALATTYHLYSAIRHLLV 219
           QF+FYSSKLNLL +EISALA +YHLYSAIRHL +
Sbjct: 216 QFIFYSSKLNLLVMEISALAVSYHLYSAIRHLFL 249


>Glyma06g46190.1 
          Length = 795

 Score = 51.2 bits (121), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 33/94 (35%), Positives = 48/94 (51%), Gaps = 24/94 (25%)

Query: 59  SSLRFNAYGLDATLLAGARYGTKAC---AANGPMQMGV---MARSFQR------------ 100
           ++ R+ A G D  +LAGA YG+ +    AA GPM +GV   +A+SF+R            
Sbjct: 657 AATRYMASGQDTIVLAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGII 716

Query: 101 ------GAGPEPLGLTSHKRFMSDTSSKTTETKP 128
                 G   + LGLT H+R+  D  SK +E +P
Sbjct: 717 PLCFKPGEDADTLGLTGHERYSIDLPSKISEIRP 750