Miyakogusa Predicted Gene

Lj3g3v2888630.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2888630.1 tr|A8J251|A8J251_CHLRE Predicted protein
OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_191680 PE=4
SV=1,36.77,0.000000000001,seg,NULL,CUFF.44912.1
         (264 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g32190.1                                                       411   e-115
Glyma13g38280.1                                                       411   e-115
Glyma13g38280.2                                                       394   e-110
Glyma12g10900.1                                                       154   1e-37

>Glyma12g32190.1 
          Length = 278

 Score =  411 bits (1057), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 207/271 (76%), Positives = 226/271 (83%), Gaps = 11/271 (4%)

Query: 4   ADSSKEEFLQLIKR----LTLKISNI-------IDSHSIGAVAGLAIAIFFTWRLLRSPG 52
            D+SK+E   LIKR    +T KISN+       +D  SIGAVAGLA+AI FTWRLLRSP 
Sbjct: 7   GDTSKQELFHLIKRFGACVTFKISNLFSLSLHGLDIRSIGAVAGLAVAIVFTWRLLRSPS 66

Query: 53  EPQPRQRKRQTTTSSNPGVSTHSNAXXXXXXXXXXXXXXXAQNVVDELFQPVKPTLGQIV 112
             Q RQ+KRQ  +SSNPGV+THSN                AQNVVDE FQPVKPTLGQIV
Sbjct: 67  GSQRRQQKRQGPSSSNPGVTTHSNVSDVPSDACSPSDDSRAQNVVDEFFQPVKPTLGQIV 126

Query: 113 RQKLNEGRKVTCRLLGVILEETSPEELQKQVTVKSTVLEVLLEITKFCDLYLMERVLDDE 172
           RQKL+EGRKVTCRLLGVILEE+SPEELQKQ TV+S+VLEVLLE+TKFCDLYLMERVLDDE
Sbjct: 127 RQKLSEGRKVTCRLLGVILEESSPEELQKQATVRSSVLEVLLEVTKFCDLYLMERVLDDE 186

Query: 173 SEKRVLVALEDAGVFTSGGLVKDKVLFCSTEIGRSSFVRQLEPDWHIDSNPEIISQLARF 232
           SEKRVLVALE+AGVFTSG LVKDKVLFCSTE GRSSFVRQLEPDWHIDSNPEI++QLARF
Sbjct: 187 SEKRVLVALEEAGVFTSGRLVKDKVLFCSTENGRSSFVRQLEPDWHIDSNPEIVTQLARF 246

Query: 233 IKYQLHVSPFRTERTAANVFSAPSLEQFFGS 263
           IKYQLHVSP++TERTAANVFSAPSLEQFFGS
Sbjct: 247 IKYQLHVSPYKTERTAANVFSAPSLEQFFGS 277


>Glyma13g38280.1 
          Length = 280

 Score =  411 bits (1056), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 209/273 (76%), Positives = 228/273 (83%), Gaps = 13/273 (4%)

Query: 4   ADSSKEEFLQLIKR----LTLKISNI-------IDSHSIGAVAGLAIAIFFTWRLLRSPG 52
            D+SK+E  QLIKR    +T KISN+       +D  SIGAVAGLA+AI FTWRLLRSP 
Sbjct: 7   GDTSKQELFQLIKRFGAYVTFKISNLFPLSLHNLDLRSIGAVAGLAVAIVFTWRLLRSPS 66

Query: 53  EPQPRQRKRQTTTSSNPGVSTHSN--AXXXXXXXXXXXXXXXAQNVVDELFQPVKPTLGQ 110
             Q RQ+KRQ  +SSNPGV T+SN  A               AQNVVDE FQPVKPTLGQ
Sbjct: 67  GSQRRQQKRQGPSSSNPGVGTNSNSNASVVPSDACSPSDDSRAQNVVDEFFQPVKPTLGQ 126

Query: 111 IVRQKLNEGRKVTCRLLGVILEETSPEELQKQVTVKSTVLEVLLEITKFCDLYLMERVLD 170
           IVRQKL+EGRKVTCRLLGVILEE+SPEELQKQ TV+S+VLEVLLE+TKFCDLYLMERVLD
Sbjct: 127 IVRQKLSEGRKVTCRLLGVILEESSPEELQKQATVRSSVLEVLLEVTKFCDLYLMERVLD 186

Query: 171 DESEKRVLVALEDAGVFTSGGLVKDKVLFCSTEIGRSSFVRQLEPDWHIDSNPEIISQLA 230
           DESEKRVLVALE+AGVFTSGGLVKDKVLFCSTE GRSSFVRQLEPDWHIDSNPEI++QLA
Sbjct: 187 DESEKRVLVALEEAGVFTSGGLVKDKVLFCSTENGRSSFVRQLEPDWHIDSNPEIVTQLA 246

Query: 231 RFIKYQLHVSPFRTERTAANVFSAPSLEQFFGS 263
           RFIKYQLHVSP++TERTAANVFSAPSLEQFFGS
Sbjct: 247 RFIKYQLHVSPYKTERTAANVFSAPSLEQFFGS 279


>Glyma13g38280.2 
          Length = 247

 Score =  394 bits (1012), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 195/239 (81%), Positives = 209/239 (87%), Gaps = 2/239 (0%)

Query: 27  DSHSIGAVAGLAIAIFFTWRLLRSPGEPQPRQRKRQTTTSSNPGVSTHSN--AXXXXXXX 84
           D  SIGAVAGLA+AI FTWRLLRSP   Q RQ+KRQ  +SSNPGV T+SN  A       
Sbjct: 8   DLRSIGAVAGLAVAIVFTWRLLRSPSGSQRRQQKRQGPSSSNPGVGTNSNSNASVVPSDA 67

Query: 85  XXXXXXXXAQNVVDELFQPVKPTLGQIVRQKLNEGRKVTCRLLGVILEETSPEELQKQVT 144
                   AQNVVDE FQPVKPTLGQIVRQKL+EGRKVTCRLLGVILEE+SPEELQKQ T
Sbjct: 68  CSPSDDSRAQNVVDEFFQPVKPTLGQIVRQKLSEGRKVTCRLLGVILEESSPEELQKQAT 127

Query: 145 VKSTVLEVLLEITKFCDLYLMERVLDDESEKRVLVALEDAGVFTSGGLVKDKVLFCSTEI 204
           V+S+VLEVLLE+TKFCDLYLMERVLDDESEKRVLVALE+AGVFTSGGLVKDKVLFCSTE 
Sbjct: 128 VRSSVLEVLLEVTKFCDLYLMERVLDDESEKRVLVALEEAGVFTSGGLVKDKVLFCSTEN 187

Query: 205 GRSSFVRQLEPDWHIDSNPEIISQLARFIKYQLHVSPFRTERTAANVFSAPSLEQFFGS 263
           GRSSFVRQLEPDWHIDSNPEI++QLARFIKYQLHVSP++TERTAANVFSAPSLEQFFGS
Sbjct: 188 GRSSFVRQLEPDWHIDSNPEIVTQLARFIKYQLHVSPYKTERTAANVFSAPSLEQFFGS 246


>Glyma12g10900.1 
          Length = 86

 Score =  154 bits (389), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 76/90 (84%), Positives = 81/90 (90%), Gaps = 4/90 (4%)

Query: 141 KQVTVKSTVLEVLLEITKFCDLYLMERVLDDESEKRVLVALEDAGVFTSGGLVKDKVLFC 200
           KQ T++S+VLEVLLEITKFCDLYLM+RVLDDESEKRVLV LED  +FTSGGL    VLFC
Sbjct: 1   KQATIRSSVLEVLLEITKFCDLYLMDRVLDDESEKRVLVVLEDVEIFTSGGL----VLFC 56

Query: 201 STEIGRSSFVRQLEPDWHIDSNPEIISQLA 230
           STE GRSSFVRQLEPDWHIDSNPEIISQLA
Sbjct: 57  STENGRSSFVRQLEPDWHIDSNPEIISQLA 86