Miyakogusa Predicted Gene

Lj3g3v2888310.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2888310.1 Non Chatacterized Hit- tr|I1KF92|I1KF92_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.40201
PE,55.73,2e-17,seg,NULL,CUFF.44881.1
         (115 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g38020.1                                                        74   5e-14
Glyma06g45670.1                                                        59   9e-10
Glyma12g11160.1                                                        51   2e-07
Glyma01g25910.1                                                        49   2e-06

>Glyma13g38020.1 
          Length = 129

 Score = 73.6 bits (179), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 53/111 (47%), Positives = 55/111 (49%), Gaps = 22/111 (19%)

Query: 19  QAMAHESEAQAPLQGLNLNLLEHKTQTSVP----KNDKVXXXXXX-------------XX 61
           QAMA ESEA  P     LN LE K Q  V     K DKV                     
Sbjct: 19  QAMALESEAPMP----GLNPLEVKIQREVKVSDQKRDKVVVQPVAGSRGSSSSHEEGESK 74

Query: 62  XXXXXXXRIRRLGIKHHSIDKSEAGGGVIIGGFVTAIFAAVFAYIRVTRKR 112
                   IR+LG KHHS DKS AGG VI+GG VT  FAAVF YIRVTRKR
Sbjct: 75  AEEAEAPSIRKLG-KHHSADKSVAGGSVILGGLVTVTFAAVFCYIRVTRKR 124


>Glyma06g45670.1 
          Length = 133

 Score = 59.3 bits (142), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 54/111 (48%), Positives = 60/111 (54%), Gaps = 23/111 (20%)

Query: 22  AHESE-AQAPLQGLNLNLLEHKTQTSVPKNDK-------------------VXXXXXXXX 61
           AHES+ AQAPL  LN    EHKTQT V  +D                             
Sbjct: 22  AHESDQAQAPLTVLNP--FEHKTQTGVQLHDDDQNSDHKVAVSGAIEESPSSSEEKSGES 79

Query: 62  XXXXXXXRIRRLGIKHHSIDKSEAGGGVIIGGFVTAIFAAVFAYIRVTRKR 112
                  +IRR+G KHHS D+S AGGGVIIGG VTAIFAAVF YIRVTR+R
Sbjct: 80  NEAAEAPQIRRMG-KHHSSDRSVAGGGVIIGGLVTAIFAAVFCYIRVTRRR 129


>Glyma12g11160.1 
          Length = 65

 Score = 51.2 bits (121), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/43 (83%), Positives = 38/43 (88%), Gaps = 1/43 (2%)

Query: 70  IRRLGIKHHSIDKSEAGGGVIIGGFVTAIFAAVFAYIRVTRKR 112
           IRR+G KHHS DKS AGGGVIIGG VTAIFAAVF YIRVTR+R
Sbjct: 20  IRRIG-KHHSSDKSVAGGGVIIGGLVTAIFAAVFCYIRVTRRR 61


>Glyma01g25910.1 
          Length = 106

 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 24/36 (66%)

Query: 76  KHHSIDKSEAGGGVIIGGFVTAIFAAVFAYIRVTRK 111
           +HHS DKS AG GVI+ G  T    +VF YIR TR+
Sbjct: 64  RHHSFDKSRAGAGVILVGLATTFLVSVFCYIRATRR 99