Miyakogusa Predicted Gene

Lj3g3v2862530.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2862530.1 Non Chatacterized Hit- tr|K4DCP0|K4DCP0_SOLLC
Uncharacterized protein OS=Solanum lycopersicum GN=Sol,55.95,4e-19,
,CUFF.44858.1
         (93 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g11760.1                                                       142   8e-35
Glyma06g45220.1                                                       142   1e-34

>Glyma12g11760.1 
          Length = 90

 Score =  142 bits (358), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 72/93 (77%), Positives = 78/93 (83%), Gaps = 5/93 (5%)

Query: 1  MASLVRGAASLSRTAISASKSPIQLLHRRNFAGAADHHGPAKVDFWKDPMSPSKWKEEHF 60
          MAS  RGAASL+R  +S SK+P+QL+HRR   G ADHHGP KV  WKDPMSPSKWKEEHF
Sbjct: 1  MASFARGAASLTRIGLSTSKTPLQLIHRR---GLADHHGPPKVACWKDPMSPSKWKEEHF 57

Query: 61 VIVSLTGWGLLIYGGYKLATG--GKKEEKLVKA 91
          VIVSLTGWGLLIYGGYKLATG  GKKEE+L KA
Sbjct: 58 VIVSLTGWGLLIYGGYKLATGGKGKKEEELAKA 90


>Glyma06g45220.1 
          Length = 94

 Score =  142 bits (357), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 72/94 (76%), Positives = 79/94 (84%), Gaps = 5/94 (5%)

Query: 1  MASLVRGAASLSRTAISASKSPIQLLHRRNFAGAADHHGPAKVDFWKDPMSPSKWKEEHF 60
          MAS  RGAASL+R  +S+SK+P+QL+HRR   G ADHHGP KV  WKDPMSPSKWKEEHF
Sbjct: 1  MASFARGAASLTRIGLSSSKTPLQLIHRR---GLADHHGPPKVACWKDPMSPSKWKEEHF 57

Query: 61 VIVSLTGWGLLIYGGYKLATG--GKKEEKLVKAS 92
          VIVSLTGWGLLIYGG+KLATG  GKKEE L KAS
Sbjct: 58 VIVSLTGWGLLIYGGFKLATGGKGKKEEVLAKAS 91