Miyakogusa Predicted Gene

Lj3g3v2862510.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2862510.1 tr|A9TIQ0|A9TIQ0_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_146163,46.51,1e-18, ,CUFF.44823.1
         (100 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g46960.1                                                       158   1e-39
Glyma09g39350.1                                                       125   9e-30

>Glyma18g46960.1 
          Length = 132

 Score =  158 bits (400), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 73/93 (78%), Positives = 81/93 (87%)

Query: 1   MGLKVGFEVGEELGFYSGCLHIWTSAIRLDPNCFSSRAKTTINQMQDLVHKYPLMDPEDL 60
           +GLKVGFEVGEELGFY GC+ IWTSAIRLDP CFS RAKT I QM++L+ KYPLMDPE+ 
Sbjct: 38  VGLKVGFEVGEELGFYRGCVEIWTSAIRLDPTCFSPRAKTFICQMEELIQKYPLMDPENA 97

Query: 61  QVQAIMDSLRLKFKMLCSSLHVKLDYSVYPNSS 93
           QVQ IMDSLRLKFKM CSSLHVKL+Y+ YP SS
Sbjct: 98  QVQEIMDSLRLKFKMACSSLHVKLEYNGYPKSS 130


>Glyma09g39350.1 
          Length = 128

 Score =  125 bits (314), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 55/75 (73%), Positives = 65/75 (86%)

Query: 1   MGLKVGFEVGEELGFYSGCLHIWTSAIRLDPNCFSSRAKTTINQMQDLVHKYPLMDPEDL 60
           +GLKVGFEVGEELGFY GC+ IWT+AI+LDP CFS RA   I Q+++L+ KYPLMDPE++
Sbjct: 38  VGLKVGFEVGEELGFYRGCVDIWTTAIQLDPTCFSPRATKIIGQLEELIQKYPLMDPENV 97

Query: 61  QVQAIMDSLRLKFKM 75
           QVQ IMDSLRLKFKM
Sbjct: 98  QVQEIMDSLRLKFKM 112