Miyakogusa Predicted Gene
- Lj3g3v2848940.3
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v2848940.3 Non Chatacterized Hit- tr|K4CFM9|K4CFM9_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,27.82,1e-17,seg,NULL,CUFF.44801.3
(393 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma12g33730.1 395 e-110
Glyma13g36760.1 373 e-103
Glyma13g36760.2 365 e-101
Glyma12g14350.1 240 2e-63
Glyma06g43610.2 239 4e-63
Glyma06g43610.1 229 5e-60
Glyma12g14350.2 151 1e-36
Glyma06g33970.2 52 9e-07
Glyma06g33970.1 52 9e-07
>Glyma12g33730.1
Length = 410
Score = 395 bits (1016), Expect = e-110, Method: Compositional matrix adjust.
Identities = 225/411 (54%), Positives = 268/411 (65%), Gaps = 19/411 (4%)
Query: 1 MSMDIKGITWVGNMYQKFENXXXXXXXXXXXXXXKYMEKTVGESVKKIYSDVMQDLVPPS 60
M+MD KGITWVGN++QKFE+ M+ TVGESVKKIYSDVMQDL+PP
Sbjct: 1 MAMDAKGITWVGNIFQKFEDIYVDVEDTMLEYIGNQMQ-TVGESVKKIYSDVMQDLLPPP 59
Query: 61 SCHLGEKQVPELPVDQYTDADFCKKSFQGSMKITIKPDTKLTTKDSRTKNDVDIGVIHAE 120
L E ELP+DQY DA F KSFQGS KIT+K DT TT+DSR K+DVD VIHA+
Sbjct: 60 LYDLDETSASELPIDQYIDAGFSNKSFQGSKKITVKDDTNQTTEDSRIKHDVDNDVIHAK 119
Query: 121 SYDADVSIMSVSGNSVKGNNFISHTGRHVRSTGIQLNLDTDESLQKRKMPAPKTVNEITS 180
S D+D S S NSVKGN+FISH ++V ST I+ NL DE+ Q + +PA KTV+EIT
Sbjct: 120 SGDSDALFTSASCNSVKGNSFISHARQYVGSTDIRSNLGGDENRQNKSIPASKTVSEITL 179
Query: 181 SKTDT------SELSNVNQTQEATVSQPASTEVTTLASVADCCNEFGNENTEHILNVLXX 234
SK DT ELS VNQ ATVS+ A EVTT+ SV DCCNE N +TE I NVL
Sbjct: 180 SKADTCSTSQSCELSRVNQNHAATVSKAAFAEVTTITSVDDCCNEIENASTEEIPNVLVL 239
Query: 235 XXXXXXXXXXXIV------LYGDPYEFSMVSTMQPEDCCCDTVIVSRPEVAETWNLDIAE 288
+ L+GDPY +MV T +P++ T I S PE+ ETW+LD+ +
Sbjct: 240 AAESAEEKEMHVSSYSSSDLFGDPYGVTMVGTFEPDNYSYPTTIASHPEITETWDLDVPK 299
Query: 289 VDS-VKEQGRKTTQF-DELKLEETCVMVTRDDLQFVPKARVNSKTSK----RPFSLSKKF 342
+ + + EQG KT Q DELKLEETCVMVTRD+L+ V A N TSK +PFSLSKK
Sbjct: 300 IGTIIVEQGHKTIQQDDELKLEETCVMVTRDELESVAIALGNLITSKNKKRQPFSLSKKA 359
Query: 343 ARKQEYEELAIWHGNNEKGKNGCLENSGRTLQEDQKELLLPGISEPEWELL 393
AR+QEYE+LAI HGNNE K EN TLQ+D K+LLLP ISEPEWELL
Sbjct: 360 ARRQEYEKLAILHGNNEIEKGDFAENLCPTLQDDHKKLLLPDISEPEWELL 410
>Glyma13g36760.1
Length = 388
Score = 373 bits (958), Expect = e-103, Method: Compositional matrix adjust.
Identities = 215/413 (52%), Positives = 258/413 (62%), Gaps = 45/413 (10%)
Query: 1 MSMDIKGITWVGNMYQKFENXXXXXXXXXXXXXXKYM---EKTVGESVKKIYSDVMQDLV 57
M+MD+KGITWVGN++Q FE+ KY+ +TVGESVKKIYSDVMQDL+
Sbjct: 1 MAMDVKGITWVGNIFQTFEDIYVDVEDTMLEETVKYIGNQMQTVGESVKKIYSDVMQDLL 60
Query: 58 PPSSCHLGEKQVPELPVDQYTDADFCKKSFQGSMKITIKPDTKLTTKDSRTKNDVDIGVI 117
PPSS L E PELP+DQY DA F KKSFQGS KIT+K DT T+DSR +DVD VI
Sbjct: 61 PPSSYDLDETSAPELPIDQYADAGFSKKSFQGSKKITVKDDTNQMTEDSRINHDVDNDVI 120
Query: 118 HAESYDADVSIMSVSGNSVKGNNFISHTGRHVRSTGIQLNLDTDESLQKRKMPAPKTVNE 177
HAE D+D +S S NSVK NNFI+H ++V V+E
Sbjct: 121 HAEFCDSDALFISASCNSVKRNNFIAHARQYV-------------------------VSE 155
Query: 178 ITSSKTDT------SELSNVNQTQEATVSQPASTEVTTLASVADCCNEFGNENTEHILNV 231
IT KTDT E+S VNQ +TVS+ AS+EVTT+ASVADCCNE N +TE I +V
Sbjct: 156 ITLLKTDTCSISQSCEVSRVNQNHASTVSKAASSEVTTIASVADCCNEIENASTEEIPDV 215
Query: 232 LXXXXXXXXXXXXXI-----VLYGDPYEFSMVSTMQPEDCCCDTVIVSRPEVAETWNLDI 286
L I VL GDPY +MV T +P++ ++I S PE+ ETW+L++
Sbjct: 216 LVLAESAEEKEMHIISYSSSVLLGDPYGVTMVRTFEPDNYSYHSIIASHPEITETWDLNV 275
Query: 287 AEVDS-VKEQGRKTT-QFDELKLEETCVMVTRDDLQFVPKARVNSKTSK----RPFSLSK 340
+ + + EQG KT Q DELKLEETCVMV RD+LQ VP AR N TSK +PFSLSK
Sbjct: 276 PMIGTIIVEQGHKTMHQDDELKLEETCVMVARDELQSVPNARGNLITSKNKKRQPFSLSK 335
Query: 341 KFARKQEYEELAIWHGNNEKGKNGCLENSGRTLQEDQKELLLPGISEPEWELL 393
K R+QEYEELAI H NNEK K EN TLQ+D K+LLLP I EPEWELL
Sbjct: 336 KATRRQEYEELAILHRNNEKEKGDFAENLCSTLQDDHKKLLLPDIYEPEWELL 388
>Glyma13g36760.2
Length = 385
Score = 365 bits (937), Expect = e-101, Method: Compositional matrix adjust.
Identities = 214/413 (51%), Positives = 256/413 (61%), Gaps = 48/413 (11%)
Query: 1 MSMDIKGITWVGNMYQKFENXXXXXXXXXXXXXXKYM---EKTVGESVKKIYSDVMQDLV 57
M+MD+KGITWVGN++Q FE+ KY+ +TVGESVKKIYSDVMQDL+
Sbjct: 1 MAMDVKGITWVGNIFQTFEDIYVDVEDTMLEETVKYIGNQMQTVGESVKKIYSDVMQDLL 60
Query: 58 PPSSCHLGEKQVPELPVDQYTDADFCKKSFQGSMKITIKPDTKLTTKDSRTKNDVDIGVI 117
PPSS L E PELP+DQY DA F KKSFQGS KIT+K DT T+DSR +DVD VI
Sbjct: 61 PPSSYDLDETSAPELPIDQYADAGFSKKSFQGSKKITVKDDTNQMTEDSRINHDVDNDVI 120
Query: 118 HAESYDADVSIMSVSGNSVKGNNFISHTGRHVRSTGIQLNLDTDESLQKRKMPAPKTVNE 177
HAE D+D +S S NSVK NNFI+H ++V V+E
Sbjct: 121 HAEFCDSDALFISASCNSVKRNNFIAHARQYV-------------------------VSE 155
Query: 178 ITSSKTDT------SELSNVNQTQEATVSQPASTEVTTLASVADCCNEFGNENTEHILNV 231
IT KTDT E+S VNQ +TVS+ AS+EVTT+ASVADCCNE N +TE I +V
Sbjct: 156 ITLLKTDTCSISQSCEVSRVNQNHASTVSKAASSEVTTIASVADCCNEIENASTEEIPDV 215
Query: 232 LXXXXXXXXXXXXXI-----VLYGDPYEFSMVSTMQPEDCCCDTVIVSRPEVAETWNLDI 286
L I VL GDPY +MV T +P++ ++I S P ETW+L++
Sbjct: 216 LVLAESAEEKEMHIISYSSSVLLGDPYGVTMVRTFEPDNYSYHSIIASHP---ETWDLNV 272
Query: 287 AEVDS-VKEQGRKTT-QFDELKLEETCVMVTRDDLQFVPKARVNSKTSK----RPFSLSK 340
+ + + EQG KT Q DELKLEETCVMV RD+LQ VP AR N TSK +PFSLSK
Sbjct: 273 PMIGTIIVEQGHKTMHQDDELKLEETCVMVARDELQSVPNARGNLITSKNKKRQPFSLSK 332
Query: 341 KFARKQEYEELAIWHGNNEKGKNGCLENSGRTLQEDQKELLLPGISEPEWELL 393
K R+QEYEELAI H NNEK K EN TLQ+D K+LLLP I EPEWELL
Sbjct: 333 KATRRQEYEELAILHRNNEKEKGDFAENLCSTLQDDHKKLLLPDIYEPEWELL 385
>Glyma12g14350.1
Length = 372
Score = 240 bits (612), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 165/412 (40%), Positives = 212/412 (51%), Gaps = 60/412 (14%)
Query: 1 MSMDIKGITWVGNMYQKFENXXXXXXXXXXXXXXKYME---KTVGESVKKIYSDVMQDLV 57
++MD+KGI WVGNMYQKFEN KY+E + VGESVKK+YS+++ DL+
Sbjct: 2 ITMDVKGIKWVGNMYQKFENMFLEVEDVMYEDTVKYIENQMQAVGESVKKLYSEIVGDLL 61
Query: 58 PPSSCHLGEKQVPELPVDQYTDADFCKKSFQGSMKITIKPDTKLTTKDSRTKNDVDIGVI 117
PP EK ELP+D+ DA C+K F + K DTK T+DSR + VD
Sbjct: 62 PP------EKVGIELPIDKRADAGLCRKPFHVYKERHAKADTKQRTEDSRIVHGVDNVAT 115
Query: 118 HAESYD----ADVSIMSVSGNSVKGNNFISHTGRHVRSTGIQLNLDTDESLQKRKMPAPK 173
A YD AD S M NSVK F S + ++VR ++ N+ DE+ +KM A K
Sbjct: 116 LAALYDGTSKADASSMLSLRNSVKEGKFSSPSRQYVRRMDVKSNVRIDENPVNKKMDATK 175
Query: 174 TVNEITSSKTD------TSELSNVNQTQE--ATVSQPASTEVTTLASVADCCNEFGNENT 225
+N+ ++TD + E+SN NQ Q T+++PAS EV LAS C NE N T
Sbjct: 176 IINKTNLAETDACRTSQSYEISNKNQNQNHGVTIAKPASEEVARLASDTHCSNEIENSCT 235
Query: 226 EHILNVLXXXXXXXXXXXXXIVLYGDPYEFSMVSTMQPEDCCCDTVIVSRPEVAETWNLD 285
+ NV L E V T+ C
Sbjct: 236 KQFPNV---------------PLLLKSAEEKPVDTISSSSC------------------- 261
Query: 286 IAEVDSVKEQGRKTTQFDELKLEETCVMVTRDDLQFVPKARVNSKTSKRP----FSLSKK 341
A EQG +T Q D LKLEE CVMV D++Q PK N T K+ FSLSKK
Sbjct: 262 -APFGEPVEQGHETMQEDHLKLEEACVMVNGDEIQLPPKEGGNLNTKKKKARQTFSLSKK 320
Query: 342 FARKQEYEELAIWHGNNEKGKNGCLENSGRTLQEDQKELLLPGISEPEWELL 393
ARKQEY+EL WH N+EK K C++N TL ++Q +LLLP +SEPEWELL
Sbjct: 321 SARKQEYKELVAWHMNSEKVKGDCMKNLDPTLPQEQNKLLLPSMSEPEWELL 372
>Glyma06g43610.2
Length = 348
Score = 239 bits (609), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 163/404 (40%), Positives = 210/404 (51%), Gaps = 68/404 (16%)
Query: 1 MSMDIKGITWVGNMYQKFENXXXXXXXXXXXXXXKYME---KTVGESVKKIYSDVMQDLV 57
++MD+KGI WVGNMYQKFEN KY+E +TVGESVKK+YS+++ DL+
Sbjct: 2 ITMDVKGIRWVGNMYQKFENMFLEAEDVMYEDTVKYIENQMQTVGESVKKLYSEIVGDLL 61
Query: 58 PPSSCHLGEKQVPELPVDQYTDADFCKKSFQGSMKITIKPDTKLTTKDSRTKNDVDIGVI 117
PP GEK ELP+D+ DA KK F + +K DTK TT+DSR + +GV
Sbjct: 62 PP-----GEKVSIELPIDKCADAGLYKKPFHVYKERHVKADTKQTTEDSR----IVLGVD 112
Query: 118 HAESYDADVSIMSVSGNSVKGNNFISHTGRHVRSTGIQLNLDTDESLQKRKMPAPKTVNE 177
+ + S +S+ NSVK +NF S + ++VR + NL DE+ +KM +NE
Sbjct: 113 NVARLAS--STLSLR-NSVKESNFSSPSRQYVRRMDVISNLGIDENPVNKKMAVTNIINE 169
Query: 178 ITSSKTDTSELSNVNQTQEATVSQPASTEVTTLASVADCCNEFGNENTEHILNVLXXXXX 237
T ++T S Q TVS+PAS +V LAS DC NE + +T+ NV
Sbjct: 170 TTLAETVACRTS-----QSFTVSKPASAKVARLASDTDCSNEIEDASTKQFPNVPQLVKA 224
Query: 238 XXX----XXXXXIVLYGDPYEFSMVSTMQPEDCCCDTVIVSRPEVAETWNLDIAEVDSVK 293
V +G+P
Sbjct: 225 AEEKPVDKSSSSCVPFGEPV---------------------------------------- 244
Query: 294 EQGRKTTQFDELKLEETCVMVTRDDLQFVPKARVNSKTSKRP----FSLSKKFARKQEYE 349
EQG KT Q D LKLEE CVMV D++Q PKA N T K+ FSLSKK ARKQEY+
Sbjct: 245 EQGHKTMQEDHLKLEEACVMVNGDEIQLPPKAGGNLNTKKKKARQTFSLSKKSARKQEYK 304
Query: 350 ELAIWHGNNEKGKNGCLENSGRTLQEDQKELLLPGISEPEWELL 393
ELA WH N+EK K C+EN TL +D K+LLLP +SEPEWELL
Sbjct: 305 ELAAWHMNSEKVKGDCMENLDPTLPQDNKKLLLPSMSEPEWELL 348
>Glyma06g43610.1
Length = 373
Score = 229 bits (583), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 162/429 (37%), Positives = 211/429 (49%), Gaps = 93/429 (21%)
Query: 1 MSMDIKGITWVGNMYQKFENXXXXXXXXXXXXXXKYME---KTVGESVKKIYSDVMQDLV 57
++MD+KGI WVGNMYQKFEN KY+E +TVGESVKK+YS+++ DL+
Sbjct: 2 ITMDVKGIRWVGNMYQKFENMFLEAEDVMYEDTVKYIENQMQTVGESVKKLYSEIVGDLL 61
Query: 58 PPSSCHLGEKQVPELPVDQYTDADFCKKSFQGSMKITIKPDTKLTTKDSRTKNDVDIGVI 117
PP GEK ELP+D+ DA KK F + +K DTK TT+DSR + +GV
Sbjct: 62 PP-----GEKVSIELPIDKCADAGLYKKPFHVYKERHVKADTKQTTEDSR----IVLGVD 112
Query: 118 HAESYDADVSIMSVSGNSVKGNNFISHTGRHVRSTGIQLNLDTDESLQKRKMPAPKTVNE 177
+ + S +S+ NSVK +NF S + ++VR + NL DE+ +KM +NE
Sbjct: 113 NVARLAS--STLSLR-NSVKESNFSSPSRQYVRRMDVISNLGIDENPVNKKMAVTNIINE 169
Query: 178 ITSSKTDTSELSNVNQTQEATVSQPASTEVTTLASVADCCNEFGNENTEHILNVLXXXXX 237
T ++T S Q TVS+PAS +V LAS DC NE + +T+ NV
Sbjct: 170 TTLAETVACRTS-----QSFTVSKPASAKVARLASDTDCSNEIEDASTKQFPNVPQLVKA 224
Query: 238 XXX----XXXXXIVLYGDPYEFSMVSTMQPEDCCCDTVIVSRPEVAETWNLDIAEVDSVK 293
V +G+P
Sbjct: 225 AEEKPVDKSSSSCVPFGEPV---------------------------------------- 244
Query: 294 EQGRKTTQFDELKLEETCVMVTRDDLQFVPKARVN------------------------- 328
EQG KT Q D LKLEE CVMV D++Q PKA N
Sbjct: 245 EQGHKTMQEDHLKLEEACVMVNGDEIQLPPKAGGNLNTKKVHTPPLILFGTCSYSTLTKV 304
Query: 329 ----SKTSKRPFSLSKKFARKQEYEELAIWHGNNEKGKNGCLENSGRTLQEDQKELLLPG 384
K +++ FSLSKK ARKQEY+ELA WH N+EK K C+EN TL +D K+LLLP
Sbjct: 305 CFQFKKKARQTFSLSKKSARKQEYKELAAWHMNSEKVKGDCMENLDPTLPQDNKKLLLPS 364
Query: 385 ISEPEWELL 393
+SEPEWELL
Sbjct: 365 MSEPEWELL 373
>Glyma12g14350.2
Length = 269
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 100/246 (40%), Positives = 134/246 (54%), Gaps = 21/246 (8%)
Query: 1 MSMDIKGITWVGNMYQKFENXXXXXXXXXXXXXXKYME---KTVGESVKKIYSDVMQDLV 57
++MD+KGI WVGNMYQKFEN KY+E + VGESVKK+YS+++ DL+
Sbjct: 2 ITMDVKGIKWVGNMYQKFENMFLEVEDVMYEDTVKYIENQMQAVGESVKKLYSEIVGDLL 61
Query: 58 PPSSCHLGEKQVPELPVDQYTDADFCKKSFQGSMKITIKPDTKLTTKDSRTKNDVDIGVI 117
PP EK ELP+D+ DA C+K F + K DTK T+DSR + VD
Sbjct: 62 PP------EKVGIELPIDKRADAGLCRKPFHVYKERHAKADTKQRTEDSRIVHGVDNVAT 115
Query: 118 HAESYD----ADVSIMSVSGNSVKGNNFISHTGRHVRSTGIQLNLDTDESLQKRKMPAPK 173
A YD AD S M NSVK F S + ++VR ++ N+ DE+ +KM A K
Sbjct: 116 LAALYDGTSKADASSMLSLRNSVKEGKFSSPSRQYVRRMDVKSNVRIDENPVNKKMDATK 175
Query: 174 TVNEITSSKTD------TSELSNVNQTQE--ATVSQPASTEVTTLASVADCCNEFGNENT 225
+N+ ++TD + E+SN NQ Q T+++PAS EV LAS C NE N T
Sbjct: 176 IINKTNLAETDACRTSQSYEISNKNQNQNHGVTIAKPASEEVARLASDTHCSNEIENSCT 235
Query: 226 EHILNV 231
+ NV
Sbjct: 236 KQFPNV 241
>Glyma06g33970.2
Length = 492
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 1 MSMDIKGITWVGNMYQKFENXXXXXXXXXXXXXXKYME---KTVGESVKKIYSDVMQDLV 57
M + I+ I WVGN+YQKFE KY+E + VG+SVKK YS V+ +L+
Sbjct: 1 MDLKIQHIKWVGNIYQKFEAVCQEVDDIVGQDAVKYLENQVQNVGDSVKKFYSGVVHELL 60
Query: 58 P-PSS 61
P P+S
Sbjct: 61 PFPTS 65
>Glyma06g33970.1
Length = 492
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 1 MSMDIKGITWVGNMYQKFENXXXXXXXXXXXXXXKYME---KTVGESVKKIYSDVMQDLV 57
M + I+ I WVGN+YQKFE KY+E + VG+SVKK YS V+ +L+
Sbjct: 1 MDLKIQHIKWVGNIYQKFEAVCQEVDDIVGQDAVKYLENQVQNVGDSVKKFYSGVVHELL 60
Query: 58 P-PSS 61
P P+S
Sbjct: 61 PFPTS 65