Miyakogusa Predicted Gene

Lj3g3v2809750.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2809750.1 Non Chatacterized Hit- tr|Q9FLS3|Q9FLS3_ARATH
Putative uncharacterized protein OS=Arabidopsis
thalia,57.14,9e-19,MITOCHONDRIA ASSOCIATED GRANULOCYTE MACROPHAGE CSF
SIGNALING MOLECULE,Protein Transporter, Pam16; Pa,CUFF.44696.1
         (96 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma16g27940.1                                                       149   8e-37
Glyma16g27940.2                                                       132   1e-31
Glyma02g08820.1                                                       107   4e-24
Glyma06g20480.1                                                        96   7e-21
Glyma04g34000.1                                                        48   3e-06

>Glyma16g27940.1 
          Length = 116

 Score =  149 bits (375), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 70/96 (72%), Positives = 84/96 (87%)

Query: 1  MATRILANLIVMGGGMFAKAVVKAYHEALAKALQNGVAQETLQNTVRGARKMMTEQEARQ 60
          MA +ILANLIVMGGG+ A+AVV+AY +AL  A +NGVAQET+QNT+R A K+MTEQEAR+
Sbjct: 1  MAAKILANLIVMGGGILARAVVQAYRQALTNASKNGVAQETIQNTIRRASKVMTEQEARR 60

Query: 61 ILGVTEGTPWGEILQKYDNLFEKNSEKGSFYLQSKV 96
          ILGVTE TPW EI++KYDNLFE N++ GSFYLQSKV
Sbjct: 61 ILGVTEETPWEEIIKKYDNLFENNAKNGSFYLQSKV 96


>Glyma16g27940.2 
          Length = 105

 Score =  132 bits (331), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 61/85 (71%), Positives = 74/85 (87%)

Query: 12 MGGGMFAKAVVKAYHEALAKALQNGVAQETLQNTVRGARKMMTEQEARQILGVTEGTPWG 71
          MGGG+ A+AVV+AY +AL  A +NGVAQET+QNT+R A K+MTEQEAR+ILGVTE TPW 
Sbjct: 1  MGGGILARAVVQAYRQALTNASKNGVAQETIQNTIRRASKVMTEQEARRILGVTEETPWE 60

Query: 72 EILQKYDNLFEKNSEKGSFYLQSKV 96
          EI++KYDNLFE N++ GSFYLQSKV
Sbjct: 61 EIIKKYDNLFENNAKNGSFYLQSKV 85


>Glyma02g08820.1 
          Length = 88

 Score =  107 bits (266), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 50/65 (76%), Positives = 58/65 (89%)

Query: 32 ALQNGVAQETLQNTVRGARKMMTEQEARQILGVTEGTPWGEILQKYDNLFEKNSEKGSFY 91
          A +NGVAQET+QNT+R A K+MTEQEARQILGVTE TPW EI++KYDNLFE N++ GSFY
Sbjct: 4  ASKNGVAQETIQNTMRRASKVMTEQEARQILGVTEETPWEEIIKKYDNLFENNAKNGSFY 63

Query: 92 LQSKV 96
          LQSKV
Sbjct: 64 LQSKV 68


>Glyma06g20480.1 
          Length = 88

 Score = 96.3 bits (238), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 46/68 (67%), Positives = 56/68 (82%)

Query: 29 LAKALQNGVAQETLQNTVRGARKMMTEQEARQILGVTEGTPWGEILQKYDNLFEKNSEKG 88
          +  A +NGVAQET+QNT+R A K MT+QEARQILGVTE T W EI++KY +LFE N++ G
Sbjct: 1  IPDASRNGVAQETIQNTIRRASKGMTQQEARQILGVTEETSWEEIVKKYGSLFENNTKNG 60

Query: 89 SFYLQSKV 96
          SFYLQSKV
Sbjct: 61 SFYLQSKV 68


>Glyma04g34000.1 
          Length = 56

 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 23/36 (63%), Positives = 28/36 (77%)

Query: 61 ILGVTEGTPWGEILQKYDNLFEKNSEKGSFYLQSKV 96
          IL VTE T   EI++KY +LFE N++ GSFYLQSKV
Sbjct: 1  ILSVTEETSREEIVKKYGSLFENNAKNGSFYLQSKV 36