Miyakogusa Predicted Gene
- Lj3g3v2780540.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v2780540.1 Non Chatacterized Hit- tr|I1LWZ0|I1LWZ0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.53257 PE,88.12,0,no
description,NULL; Tryptophan synthase beta subunit-like PLP-dependent
enzymes,Tryptophan synthase,CUFF.44620.1
(373 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma13g07130.1 622 e-178
Glyma19g05630.1 187 2e-47
Glyma18g12090.1 102 7e-22
Glyma02g25300.1 102 9e-22
Glyma11g00580.1 73 5e-13
>Glyma13g07130.1
Length = 502
Score = 622 bits (1603), Expect = e-178, Method: Compositional matrix adjust.
Identities = 305/362 (84%), Positives = 324/362 (89%), Gaps = 3/362 (0%)
Query: 2 MIADTASSVSSLRTTSPYCFYSKVEKQWPQRFALSVKPKH-LRLSNACKVRATLD-SNRS 59
M+A V++L T SP CF+SKV KQWPQ FALSV+P + RLS+ACKVRATL S++S
Sbjct: 1 MMAHCVFPVNALPTPSP-CFHSKVGKQWPQGFALSVRPTNPKRLSSACKVRATLGASDKS 59
Query: 60 IDIPKQWYNLIADXXXXXXXXXXXXXXXXXKPEDLAPLFPDELIRQEVTSDRFIDIPDEV 119
I IP QWYN+IAD KP+DL+PLFPDELIRQE+ SDRFIDIPDEV
Sbjct: 60 IGIPNQWYNVIADLPVKPPPPLHPKTYEPIKPDDLSPLFPDELIRQEIASDRFIDIPDEV 119
Query: 120 LDVYKLWRPTPLIRAKRLEKLLDTPARIYYKYEGVSPAGSHKPNSAVPQAWYNLQEGIKN 179
LDVYKLWRPTPLIRAKRLEKLLDTPARIYYKYEGVSPAGSHKPNSAVPQAWYNLQ G+KN
Sbjct: 120 LDVYKLWRPTPLIRAKRLEKLLDTPARIYYKYEGVSPAGSHKPNSAVPQAWYNLQAGVKN 179
Query: 180 VVTETGAGQWGSALAFACSIFGLGCEVWQVRASYDSKPYRRLMMQTWGAKVHPSPSMITE 239
VVTETGAGQWGSALAFACSIFGLGCEVWQVRASYDSKPYRRLMMQTWGAKVHPSPSMITE
Sbjct: 180 VVTETGAGQWGSALAFACSIFGLGCEVWQVRASYDSKPYRRLMMQTWGAKVHPSPSMITE 239
Query: 240 SGQRILQEDPSSPGSLGIAISEAVEVAAKNPDTKYCLGSVLNHVLLHQSVIGEECLKQME 299
+G+R+LQEDPSSPGSLGIAISEAVEVAAKN DTKYCLGSVLNHVLLHQSVIGEEC+KQME
Sbjct: 240 AGRRMLQEDPSSPGSLGIAISEAVEVAAKNADTKYCLGSVLNHVLLHQSVIGEECIKQME 299
Query: 300 AIGETPDVIIGCTGGGSNFAGLSFPFIREKLNKKINPVIRAVEPAACPSLTKGVYAYDYG 359
AIGETPDVIIGCTGGGSNFAGLSFPF+REKLNKKINPVIRAVEPAACPSLTKGVY YDYG
Sbjct: 300 AIGETPDVIIGCTGGGSNFAGLSFPFLREKLNKKINPVIRAVEPAACPSLTKGVYTYDYG 359
Query: 360 DT 361
DT
Sbjct: 360 DT 361
>Glyma19g05630.1
Length = 241
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 92/107 (85%), Positives = 96/107 (89%), Gaps = 3/107 (2%)
Query: 255 LGIAISEAVEVAAKNPDTKYCLGSVLNHVLLHQSVIGEECLKQMEAIGETPDVIIGCTGG 314
LGI ISEAVEVAAKN +KYCL NH+LLH SVIGEE +KQMEAIGETPDVI GCTGG
Sbjct: 1 LGITISEAVEVAAKNAYSKYCLH---NHILLHHSVIGEEWIKQMEAIGETPDVIKGCTGG 57
Query: 315 GSNFAGLSFPFIREKLNKKINPVIRAVEPAACPSLTKGVYAYDYGDT 361
GSNFAGLSFPF+REKLNKKINPVIRAVEPAACPSLTKGVY YDYGDT
Sbjct: 58 GSNFAGLSFPFLREKLNKKINPVIRAVEPAACPSLTKGVYTYDYGDT 104
>Glyma18g12090.1
Length = 471
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 77/217 (35%), Positives = 105/217 (48%), Gaps = 27/217 (12%)
Query: 125 LWRPTPLIRAKRLEKLLDTPA----RIYYKYEGVSPAGSHKPNSAVPQAWYNLQEGIKNV 180
+ R +PL A+RL + P IY K E ++ G+HK N+AV QA + G K +
Sbjct: 126 VGRESPLYFAERLTEHYKRPNGEGPHIYLKREDLNHTGAHKINNAVAQALLAKRLGKKRI 185
Query: 181 VTETGAGQWGSALAFACSIFGLGCEVWQVRASYDSKPYRRLMMQTWGAKVHPSPSMITES 240
+ ETGAGQ G A A C+ FGL C ++ + + M+ GA+V P S
Sbjct: 186 IAETGAGQHGVATATVCARFGLECIIYMGAQDMERQALNVFRMRLLGAEVRP-----VHS 240
Query: 241 GQRILQEDPSSPGSLGIAISEAVEVAAKNPD-TKYCLGSVLN------HVLLHQSVIGEE 293
G L++ A SEA+ N + T Y LGSV V +VIG+E
Sbjct: 241 GTATLKD----------ATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVREFHAVIGKE 290
Query: 294 CLKQ-MEAIGETPDVIIGCTGGGSNFAGLSFPFIREK 329
KQ +E G PDV+I C GGGSN GL F+ +K
Sbjct: 291 TRKQALEKWGGKPDVLIACVGGGSNAIGLFNEFVDDK 327
>Glyma02g25300.1
Length = 479
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 76/217 (35%), Positives = 105/217 (48%), Gaps = 27/217 (12%)
Query: 125 LWRPTPLIRAKRLEKLLDTPA----RIYYKYEGVSPAGSHKPNSAVPQAWYNLQEGIKNV 180
+ R +PL A+RL + P IY K E ++ G+HK N+AV QA + G K +
Sbjct: 134 VGRESPLYFAERLTEHYKRPNGEGPHIYLKREDLNHTGAHKINNAVAQALLAKRLGKKRI 193
Query: 181 VTETGAGQWGSALAFACSIFGLGCEVWQVRASYDSKPYRRLMMQTWGAKVHPSPSMITES 240
+ ETGAGQ G A A C+ FGL C ++ + + M+ GA+V P S
Sbjct: 194 IAETGAGQHGVATATVCARFGLECIIYMGAQDMERQALNVFRMRLLGAEVRP-----VHS 248
Query: 241 GQRILQEDPSSPGSLGIAISEAVEVAAKNPD-TKYCLGSVLN------HVLLHQSVIGEE 293
G L++ A SEA+ N + T Y LGSV V +VIG+E
Sbjct: 249 GTATLKD----------ATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVREFHAVIGKE 298
Query: 294 CLKQ-MEAIGETPDVIIGCTGGGSNFAGLSFPFIREK 329
KQ +E G PD++I C GGGSN GL F+ +K
Sbjct: 299 TRKQALEKWGGKPDILIACVGGGSNAMGLFNEFVDDK 335
>Glyma11g00580.1
Length = 462
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 99/216 (45%), Gaps = 31/216 (14%)
Query: 127 RPTPLIRAKRLEKLLDTPAR-----IYYKYEGVSPAGSHKPNSAVPQAWYNLQEGIKNVV 181
R TPL AKRL + + IY K E ++ +GSHK N+A+ QA + G K+VV
Sbjct: 120 RETPLYHAKRLSEYYKSVNNGKGPDIYLKREDLNHSGSHKMNNALAQAMIAKRMGCKSVV 179
Query: 182 TETGAGQWGSALAFACSIFGLGCEVWQVRASYDSKPYRRLMMQTWGAKVHPSPSMITESG 241
T TG+GQ G A A AC+ L C V+ + +++ GA+V T+
Sbjct: 180 TATGSGQHGLATAAACAKLALDCTVFMADKDIHRQYSNVRLIKLLGAQVEAVDGGFTD-- 237
Query: 242 QRILQEDPSSPGSLGIAISEAVEVAAKNPDTKYCL-GSVLN------HVLLHQSVIGEEC 294
A SEA + + +Y L GS + V QSVIG+E
Sbjct: 238 ----------------AASEAFRYWVGDLENRYHLSGSAVGPHPCPTMVREFQSVIGKET 281
Query: 295 -LKQMEAIGETPDVIIGCTGGGSNFAGLSFPFIREK 329
++ +E G PDV++ G GSN GL FI +K
Sbjct: 282 RMQALEKWGGKPDVLVASVGTGSNALGLFHEFIADK 317