Miyakogusa Predicted Gene

Lj3g3v2769440.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2769440.1 tr|B4FP84|B4FP84_MAIZE Tic20-like protein OS=Zea
mays PE=2 SV=1,32.26,9e-19,Tic20,Tic20-like protein;
seg,NULL,CUFF.44609.1
         (273 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g34080.1                                                       352   4e-97
Glyma12g36070.1                                                       299   2e-81
Glyma07g20820.1                                                       256   2e-68
Glyma07g00850.4                                                       142   3e-34
Glyma07g00850.3                                                       142   3e-34
Glyma07g00850.2                                                       142   3e-34
Glyma07g00850.1                                                       142   3e-34
Glyma08g22130.2                                                       135   4e-32
Glyma08g22130.1                                                       135   4e-32

>Glyma13g34080.1 
          Length = 273

 Score =  352 bits (902), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 173/248 (69%), Positives = 205/248 (82%), Gaps = 1/248 (0%)

Query: 27  RNKDLIPLRRFTTFQGKNPAIVACASNSPRRSATRLASVSSPLLTDNQAHLSLRVLMSRR 86
           RNK LIP R   T + KN AI A A+NS  +S+ +L  VS+ L TD +A+LSLR+ +S+R
Sbjct: 26  RNKVLIPQRCTITNEKKNHAITAFAANSLGKSSIQLTPVSTSLFTDKEANLSLRLPISQR 85

Query: 87  RNSDIRGQAYIYHWSGFRIPANSEKPEWWWRTLSCIPYLIALQMSATGFYLEPLLDKSRI 146
            NS I GQA+ YH SGFRIPAN+EKPEWWWRTLSCIPYLIALQMS+TG+YL+P + K   
Sbjct: 86  FNSKICGQAFKYHASGFRIPANAEKPEWWWRTLSCIPYLIALQMSSTGYYLDPFIQKFPF 145

Query: 147 FRSLLFYIPGVYNRLPQWFPMLYCYLAIVIVVKNKDFPILFRFHVMMGMLLEIAMQIVWV 206
           F++L+FYIPG  NRLP WFPMLYCY+AIV VVKNKD P++FRFHVMMGMLLE+A+QIV+ 
Sbjct: 146 FQNLIFYIPGGVNRLPIWFPMLYCYVAIVWVVKNKDLPLIFRFHVMMGMLLELALQIVYT 205

Query: 207 TSNFMPLIHF-KGTLGMYYWAGVAVAYIVMMMHCIRCALLGTFVKIPLLSESAFLHSLFS 265
           +SNFMPLIHF  GTLGMYYW GVA+AYI  M+ CIR ALLG FV+IPL+SESAF+HSLFS
Sbjct: 206 SSNFMPLIHFPGGTLGMYYWTGVALAYIFTMIMCIRSALLGRFVRIPLVSESAFIHSLFS 265

Query: 266 LGGFQRPF 273
           LGGFQRPF
Sbjct: 266 LGGFQRPF 273


>Glyma12g36070.1 
          Length = 182

 Score =  299 bits (766), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 139/183 (75%), Positives = 165/183 (90%), Gaps = 1/183 (0%)

Query: 83  MSRRRNSDIRGQAYIYHWSGFRIPANSEKPEWWWRTLSCIPYLIALQMSATGFYLEPLLD 142
           MSR+ N+ IR QA+IYH SGFRIP+N+EKPEWWWRTLSC+PYL+ALQ+SA GFYLEP+L+
Sbjct: 1   MSRKSNTTIR-QAFIYHSSGFRIPSNAEKPEWWWRTLSCVPYLLALQISAAGFYLEPILE 59

Query: 143 KSRIFRSLLFYIPGVYNRLPQWFPMLYCYLAIVIVVKNKDFPILFRFHVMMGMLLEIAMQ 202
           K  +FR+L+FYIPG  NRLP WFPMLYC +AIV VVKNKD P++FRFH+MMGMLLE A+Q
Sbjct: 60  KFPLFRNLVFYIPGAVNRLPNWFPMLYCNVAIVWVVKNKDLPLIFRFHLMMGMLLEHALQ 119

Query: 203 IVWVTSNFMPLIHFKGTLGMYYWAGVAVAYIVMMMHCIRCALLGTFVKIPLLSESAFLHS 262
           IVW++SNF+PLIHFKGTLGMYYWAGVA+ YI +++ CIRCALLGTFV IPLLSESAF+HS
Sbjct: 120 IVWISSNFLPLIHFKGTLGMYYWAGVALTYIFVIIRCIRCALLGTFVSIPLLSESAFIHS 179

Query: 263 LFS 265
           LFS
Sbjct: 180 LFS 182


>Glyma07g20820.1 
          Length = 231

 Score =  256 bits (653), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 127/192 (66%), Positives = 148/192 (77%), Gaps = 15/192 (7%)

Query: 82  LMSRRRNSDIRGQAYIYHWSGFRIPANSEKPEWWWRTLSCIPYLIALQMSATGFYLEPLL 141
           L ++ +N +     Y  + SGFRIPAN EKPEWWWRTLSCIPYLIALQMS+TG+YL+P +
Sbjct: 55  LPNKTKNEETPKNKY--YASGFRIPANVEKPEWWWRTLSCIPYLIALQMSSTGYYLDPFI 112

Query: 142 DKSRIFRSLLFYIPGVYNRLPQWFPMLYCYLAIVIVVKNKDFPILFRFHVMMGMLLEIAM 201
            K   F++L+FYIPG  NRLP WFPMLYCY+AIV VVKNKD P++FRFHVMMGMLLE+A+
Sbjct: 113 QKFPFFQNLIFYIPGGVNRLPIWFPMLYCYVAIVWVVKNKDLPLIFRFHVMMGMLLELAL 172

Query: 202 QIVWVTSNFMPLIHFKGTLGMYYWAGVAVAYIVMMMHCIRCALLGTFVKIPLLSESAFLH 261
           QI              GTLGMYYW GVA+AYI  M+ CIR ALLG FV IPL+SES F+H
Sbjct: 173 QI-------------GGTLGMYYWTGVALAYIFTMIMCIRSALLGRFVSIPLVSESTFIH 219

Query: 262 SLFSLGGFQRPF 273
           SLFSLGGFQRPF
Sbjct: 220 SLFSLGGFQRPF 231


>Glyma07g00850.4 
          Length = 273

 Score =  142 bits (359), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 82/229 (35%), Positives = 130/229 (56%), Gaps = 12/229 (5%)

Query: 39  TFQGKNPAIVACASNSPRR-SATRLASVSSPLLTDNQAHLSLRV-LMSRRRNSDIRGQAY 96
           +F G N   + C    PR  + T   +VSS  + + Q HL   + L+ R R S++  +A 
Sbjct: 47  SFWGHN---LECKPLLPRGMTLTNTFAVSSLRVREGQNHLFRALPLLPRLRKSNMAPRAS 103

Query: 97  IYHWSGFRIPANSEKPEWWWRTLSCIPYLIALQMS----ATGFYLEPLLDKSRIFRSLLF 152
               + FR P  ++KP+WWWR+L+C+PYL+ L  +     T + L P L+    +     
Sbjct: 104 KDVPTSFRYPPMTKKPQWWWRSLACLPYLMPLHETWMYAETAYNLHPFLECFEFYTYPFL 163

Query: 153 YIPGVYNRLPQWFPMLYCYLAIVIVVKNKDFPILFRFHVMMGMLLEIAMQIVWVTSNFMP 212
              G    LP WF M Y ++A + +V+ K++P  FRFHV+MGMLLEIA+Q++   S +MP
Sbjct: 164 MAIG---SLPSWFLMAYFFVAYLGIVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSRWMP 220

Query: 213 LIHFKGTLGMYYWAGVAVAYIVMMMHCIRCALLGTFVKIPLLSESAFLH 261
           L  + G LGM++W  V+  Y+  ++  IRCAL G +  IP + ++A++ 
Sbjct: 221 LSLYWGKLGMHFWTAVSFGYLFTVLESIRCALAGMYADIPFICDAAYIQ 269


>Glyma07g00850.3 
          Length = 273

 Score =  142 bits (359), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 82/229 (35%), Positives = 130/229 (56%), Gaps = 12/229 (5%)

Query: 39  TFQGKNPAIVACASNSPRR-SATRLASVSSPLLTDNQAHLSLRV-LMSRRRNSDIRGQAY 96
           +F G N   + C    PR  + T   +VSS  + + Q HL   + L+ R R S++  +A 
Sbjct: 47  SFWGHN---LECKPLLPRGMTLTNTFAVSSLRVREGQNHLFRALPLLPRLRKSNMAPRAS 103

Query: 97  IYHWSGFRIPANSEKPEWWWRTLSCIPYLIALQMS----ATGFYLEPLLDKSRIFRSLLF 152
               + FR P  ++KP+WWWR+L+C+PYL+ L  +     T + L P L+    +     
Sbjct: 104 KDVPTSFRYPPMTKKPQWWWRSLACLPYLMPLHETWMYAETAYNLHPFLECFEFYTYPFL 163

Query: 153 YIPGVYNRLPQWFPMLYCYLAIVIVVKNKDFPILFRFHVMMGMLLEIAMQIVWVTSNFMP 212
              G    LP WF M Y ++A + +V+ K++P  FRFHV+MGMLLEIA+Q++   S +MP
Sbjct: 164 MAIG---SLPSWFLMAYFFVAYLGIVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSRWMP 220

Query: 213 LIHFKGTLGMYYWAGVAVAYIVMMMHCIRCALLGTFVKIPLLSESAFLH 261
           L  + G LGM++W  V+  Y+  ++  IRCAL G +  IP + ++A++ 
Sbjct: 221 LSLYWGKLGMHFWTAVSFGYLFTVLESIRCALAGMYADIPFICDAAYIQ 269


>Glyma07g00850.2 
          Length = 273

 Score =  142 bits (359), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 82/229 (35%), Positives = 130/229 (56%), Gaps = 12/229 (5%)

Query: 39  TFQGKNPAIVACASNSPRR-SATRLASVSSPLLTDNQAHLSLRV-LMSRRRNSDIRGQAY 96
           +F G N   + C    PR  + T   +VSS  + + Q HL   + L+ R R S++  +A 
Sbjct: 47  SFWGHN---LECKPLLPRGMTLTNTFAVSSLRVREGQNHLFRALPLLPRLRKSNMAPRAS 103

Query: 97  IYHWSGFRIPANSEKPEWWWRTLSCIPYLIALQMS----ATGFYLEPLLDKSRIFRSLLF 152
               + FR P  ++KP+WWWR+L+C+PYL+ L  +     T + L P L+    +     
Sbjct: 104 KDVPTSFRYPPMTKKPQWWWRSLACLPYLMPLHETWMYAETAYNLHPFLECFEFYTYPFL 163

Query: 153 YIPGVYNRLPQWFPMLYCYLAIVIVVKNKDFPILFRFHVMMGMLLEIAMQIVWVTSNFMP 212
              G    LP WF M Y ++A + +V+ K++P  FRFHV+MGMLLEIA+Q++   S +MP
Sbjct: 164 MAIG---SLPSWFLMAYFFVAYLGIVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSRWMP 220

Query: 213 LIHFKGTLGMYYWAGVAVAYIVMMMHCIRCALLGTFVKIPLLSESAFLH 261
           L  + G LGM++W  V+  Y+  ++  IRCAL G +  IP + ++A++ 
Sbjct: 221 LSLYWGKLGMHFWTAVSFGYLFTVLESIRCALAGMYADIPFICDAAYIQ 269


>Glyma07g00850.1 
          Length = 273

 Score =  142 bits (359), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 82/229 (35%), Positives = 130/229 (56%), Gaps = 12/229 (5%)

Query: 39  TFQGKNPAIVACASNSPRR-SATRLASVSSPLLTDNQAHLSLRV-LMSRRRNSDIRGQAY 96
           +F G N   + C    PR  + T   +VSS  + + Q HL   + L+ R R S++  +A 
Sbjct: 47  SFWGHN---LECKPLLPRGMTLTNTFAVSSLRVREGQNHLFRALPLLPRLRKSNMAPRAS 103

Query: 97  IYHWSGFRIPANSEKPEWWWRTLSCIPYLIALQMS----ATGFYLEPLLDKSRIFRSLLF 152
               + FR P  ++KP+WWWR+L+C+PYL+ L  +     T + L P L+    +     
Sbjct: 104 KDVPTSFRYPPMTKKPQWWWRSLACLPYLMPLHETWMYAETAYNLHPFLECFEFYTYPFL 163

Query: 153 YIPGVYNRLPQWFPMLYCYLAIVIVVKNKDFPILFRFHVMMGMLLEIAMQIVWVTSNFMP 212
              G    LP WF M Y ++A + +V+ K++P  FRFHV+MGMLLEIA+Q++   S +MP
Sbjct: 164 MAIG---SLPSWFLMAYFFVAYLGIVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSRWMP 220

Query: 213 LIHFKGTLGMYYWAGVAVAYIVMMMHCIRCALLGTFVKIPLLSESAFLH 261
           L  + G LGM++W  V+  Y+  ++  IRCAL G +  IP + ++A++ 
Sbjct: 221 LSLYWGKLGMHFWTAVSFGYLFTVLESIRCALAGMYADIPFICDAAYIQ 269


>Glyma08g22130.2 
          Length = 273

 Score =  135 bits (341), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 74/213 (34%), Positives = 118/213 (55%), Gaps = 9/213 (4%)

Query: 55  PRRSATRLASVSSPLLTDNQAHLSLRVL--MSRRRNSDIRGQAYIYHWSGFRIPANSEKP 112
           PR         +S L      +   RVL  +   R S++  +A     + FR P  ++KP
Sbjct: 60  PRGMTLSNTFTASSLRVSEGQNFLFRVLPLLPHLRKSNMVPRASKDVPTSFRYPPMTKKP 119

Query: 113 EWWWRTLSCIPYLIALQMS----ATGFYLEPLLDKSRIFRSLLFYIPGVYNRLPQWFPML 168
           +WWWR+L+C+PYL+ L  +     T + L P L+    +        G    LP WF M 
Sbjct: 120 QWWWRSLACLPYLMPLHETWMYAETAYNLHPFLECFEFYTYPFLMAIG---SLPSWFLMA 176

Query: 169 YCYLAIVIVVKNKDFPILFRFHVMMGMLLEIAMQIVWVTSNFMPLIHFKGTLGMYYWAGV 228
           Y ++A + +V+ K++P  FRFHV+MGMLLEIA+Q++   S +MPL  + G LGM++W  V
Sbjct: 177 YFFVAYLGIVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSRWMPLSLYWGKLGMHFWTAV 236

Query: 229 AVAYIVMMMHCIRCALLGTFVKIPLLSESAFLH 261
           +  Y+  ++  IRCAL+G +  IP + ++A++ 
Sbjct: 237 SFGYLFTVLESIRCALVGMYADIPFICDAAYIQ 269


>Glyma08g22130.1 
          Length = 273

 Score =  135 bits (341), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 74/213 (34%), Positives = 118/213 (55%), Gaps = 9/213 (4%)

Query: 55  PRRSATRLASVSSPLLTDNQAHLSLRVL--MSRRRNSDIRGQAYIYHWSGFRIPANSEKP 112
           PR         +S L      +   RVL  +   R S++  +A     + FR P  ++KP
Sbjct: 60  PRGMTLSNTFTASSLRVSEGQNFLFRVLPLLPHLRKSNMVPRASKDVPTSFRYPPMTKKP 119

Query: 113 EWWWRTLSCIPYLIALQMS----ATGFYLEPLLDKSRIFRSLLFYIPGVYNRLPQWFPML 168
           +WWWR+L+C+PYL+ L  +     T + L P L+    +        G    LP WF M 
Sbjct: 120 QWWWRSLACLPYLMPLHETWMYAETAYNLHPFLECFEFYTYPFLMAIG---SLPSWFLMA 176

Query: 169 YCYLAIVIVVKNKDFPILFRFHVMMGMLLEIAMQIVWVTSNFMPLIHFKGTLGMYYWAGV 228
           Y ++A + +V+ K++P  FRFHV+MGMLLEIA+Q++   S +MPL  + G LGM++W  V
Sbjct: 177 YFFVAYLGIVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSRWMPLSLYWGKLGMHFWTAV 236

Query: 229 AVAYIVMMMHCIRCALLGTFVKIPLLSESAFLH 261
           +  Y+  ++  IRCAL+G +  IP + ++A++ 
Sbjct: 237 SFGYLFTVLESIRCALVGMYADIPFICDAAYIQ 269