Miyakogusa Predicted Gene

Lj3g3v2769370.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2769370.1 Non Chatacterized Hit- tr|B9RW76|B9RW76_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,47.83,0.0000000000002,DUF3774,Protein of unknown function
wound-induced,CUFF.44600.1
         (82 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g32770.1                                                       127   3e-30
Glyma13g37700.1                                                       124   3e-29
Glyma06g45350.1                                                        61   3e-10

>Glyma12g32770.1 
          Length = 93

 Score =  127 bits (318), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 62/93 (66%), Positives = 73/93 (78%), Gaps = 11/93 (11%)

Query: 1  MSYLNRVWVAATVAVAQGHTDSGRKCKTAVGSIHQNRSRLF-----------AGVVGSGV 49
          MSYLNRVW+AATVAVAQGHTD G KCKTA+ SIH NRSRLF           +GVVGS V
Sbjct: 1  MSYLNRVWMAATVAVAQGHTDPGHKCKTALTSIHHNRSRLFSGGALSDLRPLSGVVGSDV 60

Query: 50 TGAMAGNPDAEDRLRQTDESLRKVMYMNCWGQG 82
           G++AG+ D E+R+RQ D+SLRKVMY++CWGQG
Sbjct: 61 AGSVAGSSDVENRVRQADDSLRKVMYLSCWGQG 93


>Glyma13g37700.1 
          Length = 93

 Score =  124 bits (310), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 61/93 (65%), Positives = 71/93 (76%), Gaps = 11/93 (11%)

Query: 1  MSYLNRVWVAATVAVAQGHTDSGRKCKTAVGSIHQNRSRLF-----------AGVVGSGV 49
          MSYLNRVW+AATVAVAQGHTD G KCKTA+ SIH NRSRLF           +GVVG  V
Sbjct: 1  MSYLNRVWMAATVAVAQGHTDPGHKCKTALNSIHHNRSRLFSGGALSDLRPLSGVVGPDV 60

Query: 50 TGAMAGNPDAEDRLRQTDESLRKVMYMNCWGQG 82
          +GA AG+ DA++R+ Q D+SLRKVMY +CWGQG
Sbjct: 61 SGAAAGSSDAKNRVSQADDSLRKVMYFSCWGQG 93


>Glyma06g45350.1 
          Length = 85

 Score = 61.2 bits (147), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 33/82 (40%), Positives = 45/82 (54%), Gaps = 13/82 (15%)

Query: 1  MSYLNRVWVAATVAVAQGHTDSGRKCKTAVGSIHQNRSRLFAGVVGSGVTGAMAGNPDAE 60
          MSYL R+W+  TVA A+GH+ + R+   + G + + R    + VV              E
Sbjct: 17 MSYLLRLWMPTTVAAAEGHSPNSRRRVFSAGDLSELRPAAKSDVV-------------VE 63

Query: 61 DRLRQTDESLRKVMYMNCWGQG 82
          D+   TDESLRKVMY +CW QG
Sbjct: 64 DKHGHTDESLRKVMYFSCWVQG 85