Miyakogusa Predicted Gene

Lj3g3v2746110.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2746110.1 tr|D3EPF3|D3EPF3_UCYNA Protein thf1
OS=cyanobacterium UCYN-A GN=thf1 PE=3 SV=1,29.72,2e-18,PS_II_psb29:
photosystem II biogenesis protein Psp,Photosystem II Psp29,
biogenesis; coiled-coil,NUL,
NODE_25831_length_1355_cov_419.680450.path1.1
         (297 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g32680.1                                                       523   e-149
Glyma13g37790.1                                                       518   e-147
Glyma06g45440.1                                                       446   e-125
Glyma12g11620.1                                                       435   e-122
Glyma16g30930.1                                                        91   1e-18
Glyma15g40130.1                                                        83   3e-16
Glyma20g08700.1                                                        72   8e-13

>Glyma12g32680.1 
          Length = 297

 Score =  523 bits (1348), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 255/297 (85%), Positives = 267/297 (89%)

Query: 1   MAALTSLSFSAVTQCSERKATLSSTRFLASNSEVFRIRTDFSYHYGGVRASNSSSKMVIQ 60
           MAALTSLSFSAVT CSERK TLSSTRFLAS+SE+F  RTDFSYHY GVRASNS SKMV+Q
Sbjct: 1   MAALTSLSFSAVTHCSERKVTLSSTRFLASSSEIFGFRTDFSYHYVGVRASNSPSKMVVQ 60

Query: 61  CMSSETDVPPPVSETKLSFLKAYKRPIPSIYNNVLQELIVQQHLMKYKASYRYDPVFALG 120
           CMSS TDVPP VSETKL+FLKAYKRPIPSIYN VLQELIVQQHLMKYK SYRYDPVFALG
Sbjct: 61  CMSSATDVPPTVSETKLNFLKAYKRPIPSIYNTVLQELIVQQHLMKYKRSYRYDPVFALG 120

Query: 121 FVTVYDKLMEGYPSDEDRDAIFQAYINALKEDPEQYRKDAQKLEEWARAQNPTSLVEFSS 180
           FVT+YDKLMEGYPSDEDRDAIFQAYI ALKEDPEQYR DA+KLEEWAR Q PTSLVEFSS
Sbjct: 121 FVTIYDKLMEGYPSDEDRDAIFQAYIKALKEDPEQYRIDARKLEEWARVQKPTSLVEFSS 180

Query: 181 KEGEVEGILKDIAVRAGGKGEFSYSRFFAVGLFRLLELANATEPTILEKLCAALNIDKRS 240
           KEGEVEGILKDIA RAGGKGEFSYSRFFAVGLFRLLELANATEPTIL+KLC ALNI+KRS
Sbjct: 181 KEGEVEGILKDIAERAGGKGEFSYSRFFAVGLFRLLELANATEPTILDKLCVALNINKRS 240

Query: 241 VDRDLDVYRNLLSRLVQAKELLREYVDXXXXXXXXXAEPQKANEAVTKCLGHQLSVL 297
           VDRDLDVYR LLS+LVQAKELL+EY+D         AEPQKANEA+T CLG QL  L
Sbjct: 241 VDRDLDVYRILLSKLVQAKELLKEYIDREKKKRDERAEPQKANEAITTCLGQQLPGL 297


>Glyma13g37790.1 
          Length = 297

 Score =  518 bits (1335), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 252/297 (84%), Positives = 267/297 (89%)

Query: 1   MAALTSLSFSAVTQCSERKATLSSTRFLASNSEVFRIRTDFSYHYGGVRASNSSSKMVIQ 60
           MAALTSLSFSAVT CSERK TLSSTRFLAS+SE+F  RTDFSYHY GVRASNS+SKMV+Q
Sbjct: 1   MAALTSLSFSAVTHCSERKVTLSSTRFLASSSELFGFRTDFSYHYVGVRASNSASKMVVQ 60

Query: 61  CMSSETDVPPPVSETKLSFLKAYKRPIPSIYNNVLQELIVQQHLMKYKASYRYDPVFALG 120
           CMSS TDVPP VSETKL+FLKAYKRPIPSIYN VLQELIVQQHLMKYK SYRYDPVFALG
Sbjct: 61  CMSSATDVPPTVSETKLNFLKAYKRPIPSIYNTVLQELIVQQHLMKYKRSYRYDPVFALG 120

Query: 121 FVTVYDKLMEGYPSDEDRDAIFQAYINALKEDPEQYRKDAQKLEEWARAQNPTSLVEFSS 180
           FVT+YDKLMEGYPSDEDRDAIFQAYI ALKEDPEQYR DA+KLEEWAR Q+PTSLVEFSS
Sbjct: 121 FVTIYDKLMEGYPSDEDRDAIFQAYIKALKEDPEQYRIDARKLEEWARVQSPTSLVEFSS 180

Query: 181 KEGEVEGILKDIAVRAGGKGEFSYSRFFAVGLFRLLELANATEPTILEKLCAALNIDKRS 240
           KEGE E ILKDIA RAGGKGEFSYSRFFAVGLFRL+ELANATEPTIL+KLCAALNI+KRS
Sbjct: 181 KEGEAERILKDIAERAGGKGEFSYSRFFAVGLFRLVELANATEPTILDKLCAALNINKRS 240

Query: 241 VDRDLDVYRNLLSRLVQAKELLREYVDXXXXXXXXXAEPQKANEAVTKCLGHQLSVL 297
           VDRDLDVYR LLS+LVQAKELL+EY+D          EPQKANEA+T CLG QL  L
Sbjct: 241 VDRDLDVYRILLSKLVQAKELLKEYIDREKKKRDERVEPQKANEAITTCLGQQLHGL 297


>Glyma06g45440.1 
          Length = 291

 Score =  446 bits (1148), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 223/289 (77%), Positives = 249/289 (86%), Gaps = 6/289 (2%)

Query: 1   MAALTS-LSFSAVTQCSERKATLSSTRFLASNSEVFRIRTDFSYHYGGVRASNSSSKMVI 59
           MA +TS  SFS +TQ S  +  LS+   L+SNS  FRIR  FS HY GVRASNS+SK+V+
Sbjct: 1   MATVTSSFSFSTLTQSSSPR-NLST---LSSNSPTFRIRVGFSCHYVGVRASNSASKIVV 56

Query: 60  QCMSSETDVPPPVSETKLSFLKAYKRPIPSIYNNVLQELIVQQHLMKYKASYRYDPVFAL 119
           +C S+  + PP VSETKL+FLKAYKRPIPSIYN VLQELIVQQHLM+YK SYRYD VFAL
Sbjct: 57  RCSSAVAE-PPTVSETKLNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKRSYRYDAVFAL 115

Query: 120 GFVTVYDKLMEGYPSDEDRDAIFQAYINALKEDPEQYRKDAQKLEEWARAQNPTSLVEFS 179
           GFVTVY++LMEGYPSDEDRDAIFQAYI ALKEDPEQYR DA+KLEEWARAQNPTSLV+FS
Sbjct: 116 GFVTVYEQLMEGYPSDEDRDAIFQAYIQALKEDPEQYRVDAKKLEEWARAQNPTSLVDFS 175

Query: 180 SKEGEVEGILKDIAVRAGGKGEFSYSRFFAVGLFRLLELANATEPTILEKLCAALNIDKR 239
           S+EGEVEGILKDIA RAGGKG+FSYSRFFA+GLFRLLELANA EPTILEKLCA LN+DKR
Sbjct: 176 SREGEVEGILKDIAERAGGKGDFSYSRFFAIGLFRLLELANAMEPTILEKLCAVLNVDKR 235

Query: 240 SVDRDLDVYRNLLSRLVQAKELLREYVDXXXXXXXXXAEPQKANEAVTK 288
           SVDRDLDVYRNLLS+LVQAKELL+EYVD         AEPQK+NEA+T+
Sbjct: 236 SVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKREERAEPQKSNEAITQ 284


>Glyma12g11620.1 
          Length = 291

 Score =  435 bits (1119), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 214/285 (75%), Positives = 242/285 (84%), Gaps = 5/285 (1%)

Query: 4   LTSLSFSAVTQCSERKATLSSTRFLASNSEVFRIRTDFSYHYGGVRASNSSSKMVIQCMS 63
           ++S SFS +TQ S ++   +    L+SNS  FR R  FS    GVRASNS+SKMV++C S
Sbjct: 5   ISSFSFSTLTQSSSQRNLTT----LSSNSPTFRFRVGFSCLNVGVRASNSASKMVVRCSS 60

Query: 64  SETDVPPPVSETKLSFLKAYKRPIPSIYNNVLQELIVQQHLMKYKASYRYDPVFALGFVT 123
           S  + PP VSETKL+FLKAYKRPIPSIYN VLQELIVQQHLM+YK SYRYD VFALGFVT
Sbjct: 61  SVAE-PPTVSETKLNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKRSYRYDAVFALGFVT 119

Query: 124 VYDKLMEGYPSDEDRDAIFQAYINALKEDPEQYRKDAQKLEEWARAQNPTSLVEFSSKEG 183
           VY++LMEGYPSDEDRDAIFQAYI ALKEDPEQYR DA+KLEEWAR+QNP SL+EFSS+EG
Sbjct: 120 VYEQLMEGYPSDEDRDAIFQAYIQALKEDPEQYRVDAKKLEEWARSQNPNSLLEFSSREG 179

Query: 184 EVEGILKDIAVRAGGKGEFSYSRFFAVGLFRLLELANATEPTILEKLCAALNIDKRSVDR 243
           EVEGILKDIA RAGGKG+FSYSRFFA+GLFRLLELANA EPTILEKLCA LN++KRSVDR
Sbjct: 180 EVEGILKDIAERAGGKGDFSYSRFFAIGLFRLLELANAMEPTILEKLCAVLNVNKRSVDR 239

Query: 244 DLDVYRNLLSRLVQAKELLREYVDXXXXXXXXXAEPQKANEAVTK 288
           DLDVYRNLLS+LVQAKELL+EYVD         AEPQK+NEA+T+
Sbjct: 240 DLDVYRNLLSKLVQAKELLKEYVDREKKKREERAEPQKSNEAITQ 284


>Glyma16g30930.1 
          Length = 103

 Score = 91.3 bits (225), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 48/84 (57%), Positives = 57/84 (67%)

Query: 166 WARAQNPTSLVEFSSKEGEVEGILKDIAVRAGGKGEFSYSRFFAVGLFRLLELANATEPT 225
           W   Q+ TSLV+FS +EG+VEGILKDI  RAG K EFSYSR FA+ LF LLELANA EPT
Sbjct: 1   WKGFQSSTSLVDFSFREGQVEGILKDITERAGTKEEFSYSRLFAICLFCLLELANAMEPT 60

Query: 226 ILEKLCAALNIDKRSVDRDLDVYR 249
            + + C  L     S+ R + V R
Sbjct: 61  TILEKCIKLAQRALSLSRRMPVQR 84


>Glyma15g40130.1 
          Length = 177

 Score = 83.2 bits (204), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 46/94 (48%), Positives = 59/94 (62%), Gaps = 1/94 (1%)

Query: 136 EDRDAIFQAYINALKEDPEQYRKDAQKLEEWARAQNPTSLVEFSSKEGEVEGILKDIAVR 195
           E RDAIFQAYI AL EDP+      +  +     +    L+ F  K+ ++    K   ++
Sbjct: 80  EGRDAIFQAYIKALVEDPDNTELMHESWKSGLEFKIQLLLLSFHPKKEKLRR-FKGHCIK 138

Query: 196 AGGKGEFSYSRFFAVGLFRLLELANATEPTILEK 229
             G+GEFSYSRFFAVGLFRL+EL NATEP IL+K
Sbjct: 139 GWGEGEFSYSRFFAVGLFRLVELENATEPIILDK 172


>Glyma20g08700.1 
          Length = 99

 Score = 72.0 bits (175), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 48/132 (36%), Positives = 61/132 (46%), Gaps = 53/132 (40%)

Query: 136 EDRDAIFQAYINALKEDPEQYRKDAQKLEEWARAQNPTSLVEFSSKEGEVEGILKDIAVR 195
           E RD IFQAYI ALKED +QYR                               L+   + 
Sbjct: 2   EGRDGIFQAYIKALKEDSKQYR-------------------------------LEHCVII 30

Query: 196 AGGKGEFSYSRFFAVGLFRLLELANATEPTILEKLCAALNIDKRSVDRDLDVYRNLLSRL 255
              + +  ++RF  +                       LNI+KRSVDRDLDVYR LLS+L
Sbjct: 31  VMPRNQQFWTRFCLI----------------------TLNINKRSVDRDLDVYRILLSKL 68

Query: 256 VQAKELLREYVD 267
           VQAK+LL+EY+D
Sbjct: 69  VQAKQLLKEYID 80