Miyakogusa Predicted Gene

Lj3g3v2742950.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2742950.1 tr|I3RZ73|I3RZ73_LOTJA Cytochrome b6-f complex
iron-sulfur subunit OS=Lotus japonicus PE=2 SV=1,95.36,0,no
description,Rieske [2Fe-2S] iron-sulphur domain; seg,NULL;
CytB6-F_Fe-S,Cytochrome b6-f complex F,CUFF.44592.1
         (237 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g32580.1                                                       393   e-110
Glyma13g37880.1                                                       388   e-108
Glyma06g45500.1                                                        77   1e-14
Glyma12g11520.1                                                        75   5e-14
Glyma02g07340.1                                                        50   2e-06
Glyma16g26330.1                                                        50   2e-06
Glyma02g07330.1                                                        50   2e-06

>Glyma12g32580.1 
          Length = 227

 Score =  393 bits (1010), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 190/237 (80%), Positives = 203/237 (85%), Gaps = 10/237 (4%)

Query: 1   MSSTTLSPVTPSQLCSGKSGIFCPSQALLVKPARNQMVGKAKGIRIACMATRGLRLPAVA 60
           M+STTLSP TPSQLCSGKSGIF PSQALLVKP + QM+GK+KG+RIAC AT         
Sbjct: 1   MASTTLSPTTPSQLCSGKSGIFSPSQALLVKPVKRQMMGKSKGMRIACQAT--------- 51

Query: 61  TSIPAYRVPDMEKRKXXXXXXXGAISLPSAGMLVPYATFFAPPGSGSATGGTIAKDAIGN 120
            SIPA RVPDM KR+       GAISLPSAGML+PY  FF PPGSGS+ GGT+AKDA+GN
Sbjct: 52  -SIPADRVPDMGKRQLMNLLLLGAISLPSAGMLIPYTYFFVPPGSGSSAGGTVAKDAVGN 110

Query: 121 DVVAEQWLKAHGPGDRTLTQGLKGDPTYLVVEKDRTLATYGINAVCTHLGCVVPFNTAEK 180
           DV+AE WLKAHGPGDRTL QGLKGDPTYLVVEKDRTLATY INAVCTHLGCVVP+N AE 
Sbjct: 111 DVIAENWLKAHGPGDRTLAQGLKGDPTYLVVEKDRTLATYAINAVCTHLGCVVPWNQAEN 170

Query: 181 KFICPCHGSQYNDQGRVVRGPAPLSLALAHCDVVDGKVVFVPWVETDFRTGDAPWWA 237
           KFICPCHGSQYNDQGRVVRGPAPLSLALAHCD+ DGKVVFVPWVETDFRTGDAPWWA
Sbjct: 171 KFICPCHGSQYNDQGRVVRGPAPLSLALAHCDIDDGKVVFVPWVETDFRTGDAPWWA 227


>Glyma13g37880.1 
          Length = 227

 Score =  388 bits (996), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 187/237 (78%), Positives = 202/237 (85%), Gaps = 10/237 (4%)

Query: 1   MSSTTLSPVTPSQLCSGKSGIFCPSQALLVKPARNQMVGKAKGIRIACMATRGLRLPAVA 60
           M+STTLSP TPSQLCSGKSGIF  SQALLVKP + QM+GK+KG+RIAC AT         
Sbjct: 1   MASTTLSPTTPSQLCSGKSGIFSSSQALLVKPVKRQMMGKSKGLRIACQAT--------- 51

Query: 61  TSIPAYRVPDMEKRKXXXXXXXGAISLPSAGMLVPYATFFAPPGSGSATGGTIAKDAIGN 120
            SI A RVPDM KR+       GAISLP+AGML+PY  FF PPGSGS+ GGT+AKDA+GN
Sbjct: 52  -SISADRVPDMGKRQLMNLLLLGAISLPTAGMLIPYTYFFVPPGSGSSAGGTVAKDAVGN 110

Query: 121 DVVAEQWLKAHGPGDRTLTQGLKGDPTYLVVEKDRTLATYGINAVCTHLGCVVPFNTAEK 180
           DV+AE WLKAHGPGDRTLTQGLKGDPTYLVVEKDRTLAT+ INAVCTHLGCVVP+N AE 
Sbjct: 111 DVIAENWLKAHGPGDRTLTQGLKGDPTYLVVEKDRTLATFAINAVCTHLGCVVPWNQAEN 170

Query: 181 KFICPCHGSQYNDQGRVVRGPAPLSLALAHCDVVDGKVVFVPWVETDFRTGDAPWWA 237
           KFICPCHGSQYNDQGRVVRGPAPLSLALAHCD+ DGKVVFVPWVETDFRTGDAPWWA
Sbjct: 171 KFICPCHGSQYNDQGRVVRGPAPLSLALAHCDIDDGKVVFVPWVETDFRTGDAPWWA 227


>Glyma06g45500.1 
          Length = 45

 Score = 77.0 bits (188), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 34/45 (75%), Positives = 37/45 (82%)

Query: 153 KDRTLATYGINAVCTHLGCVVPFNTAEKKFICPCHGSQYNDQGRV 197
           KDRTLATY INAVCTHLG  VP+N AE KFI  CHGSQYNDQ ++
Sbjct: 1   KDRTLATYVINAVCTHLGWDVPWNAAENKFISHCHGSQYNDQEKI 45


>Glyma12g11520.1 
          Length = 129

 Score = 75.5 bits (184), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 49/129 (37%), Positives = 64/129 (49%), Gaps = 38/129 (29%)

Query: 53  GLRLPAVATSIPAYRVPDMEKRKXXXXXXXGA-------------ISL------------ 87
           G+R+   ATS PA R+PD+ KR+       GA             ISL            
Sbjct: 1   GVRITYQATSFPADRIPDIGKRQLMNLLLLGAFHSLLLACFSHIPISLSLQVRLSHIEYG 60

Query: 88  -----PSAGM--------LVPYATFFAPPGSGSATGGTIAKDAIGNDVVAEQWLKAHGPG 134
                P+  +         + +  F     +G +TGGT+AKD IGNDV+AE+WL+ HGPG
Sbjct: 61  WSNLHPTVSIDQQCECMIFLFFLDFDENFMAGPSTGGTVAKDPIGNDVIAEKWLETHGPG 120

Query: 135 DRTLTQGLK 143
           DRTLTQGLK
Sbjct: 121 DRTLTQGLK 129


>Glyma02g07340.1 
          Length = 266

 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 22/45 (48%), Positives = 30/45 (66%), Gaps = 1/45 (2%)

Query: 165 VCTHLGCVVPFNTAE-KKFICPCHGSQYNDQGRVVRGPAPLSLAL 208
           VCTHLGC+   N  +   + CPCHGS Y+  GR+ +GPAP +L +
Sbjct: 208 VCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEV 252


>Glyma16g26330.1 
          Length = 264

 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 22/45 (48%), Positives = 30/45 (66%), Gaps = 1/45 (2%)

Query: 165 VCTHLGCVVPFNTAE-KKFICPCHGSQYNDQGRVVRGPAPLSLAL 208
           VCTHLGC+   N  +   + CPCHGS Y+  GR+ +GPAP +L +
Sbjct: 206 VCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEV 250


>Glyma02g07330.1 
          Length = 265

 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 22/45 (48%), Positives = 30/45 (66%), Gaps = 1/45 (2%)

Query: 165 VCTHLGCVVPFNTAE-KKFICPCHGSQYNDQGRVVRGPAPLSLAL 208
           VCTHLGC+   N  +   + CPCHGS Y+  GR+ +GPAP +L +
Sbjct: 207 VCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEV 251