Miyakogusa Predicted Gene

Lj3g3v2735120.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2735120.1 tr|G7JDE1|G7JDE1_MEDTR ATP-dependent DNA helicase
2 subunit OS=Medicago truncatula GN=MTR_4g023560 P,83.46,0,KU P80 DNA
HELICASE,NULL; KU AUTOANTIGEN DNA HELICASE,NULL; no description,NULL;
no description,Spen,CUFF.44529.1
         (680 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g25550.1                                                      1143   0.0  
Glyma17g00970.1                                                       681   0.0  
Glyma06g37540.1                                                       380   e-105
Glyma06g37470.1                                                       346   4e-95
Glyma01g34370.1                                                       251   2e-66

>Glyma05g25550.1 
          Length = 687

 Score = 1143 bits (2956), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 561/683 (82%), Positives = 613/683 (89%), Gaps = 4/683 (0%)

Query: 1   MARNKEALLLLLDVGPTMHSVLPEIEKVTSLLVQKKLIYNKYDEVGIVLFGTEDTDNELT 60
           MARNKEALLLLLDVGP+MH  L EIEKV S+LV KKLIY+KYDEVGIVLFGTEDT+NELT
Sbjct: 1   MARNKEALLLLLDVGPSMHPALSEIEKVCSMLVHKKLIYSKYDEVGIVLFGTEDTNNELT 60

Query: 61  TEVGGYDHVVVLKNIKVVDGDIVEALQQLPRGTSNGDFLDAVIVGLDMLIKKFGETNKGK 120
           TEVGGY HVVVLKNIKVVDGDIVEALQQLPRGT++GDFLDAVIVG+D+L+KKFG TNKGK
Sbjct: 61  TEVGGYQHVVVLKNIKVVDGDIVEALQQLPRGTTDGDFLDAVIVGMDVLVKKFGVTNKGK 120

Query: 121 KRVCLITNAQCPIKYPFEGTKEEQVTAIAKQMTIHGMKMESIILRGKISQDGNKRTMDEN 180
           KRVCLITNAQC IK   EGTKEEQVT IAKQMT HG+KMESII+RGK+SQD NK  MDEN
Sbjct: 121 KRVCLITNAQCQIKESDEGTKEEQVTTIAKQMTAHGIKMESIIMRGKLSQDANKGIMDEN 180

Query: 181 DRLLNIFAEETSTRLLYVENPISLFGAIKTRTITPVTVFRGDLELSPKLRIKVMVYKKTA 240
           DRLLNIF++ETSTRLLYVENPISLFGA++TR I  VTVFRG LE+SPKL IKVMVYKKT 
Sbjct: 181 DRLLNIFSKETSTRLLYVENPISLFGALRTRNIALVTVFRGHLEISPKLSIKVMVYKKTT 240

Query: 241 EEKFPTLKRYSDKAPLNDKYATHEVKVEYEYKSSEDPDKVIPPDQRIKGYRYGPQIVPIS 300
           EEKFP++K+YSDKAP NDK+A HEVK++YE+KSS+DPDKV+PPDQRIKGY YGPQIVPIS
Sbjct: 241 EEKFPSMKKYSDKAPPNDKFAKHEVKIDYEHKSSKDPDKVVPPDQRIKGYPYGPQIVPIS 300

Query: 301 STEWEAVKFKTEKGVKLLGFTDSSNVLRHQYMKDVYVFIAEPENTKAILAVSALARAMKE 360
           S EWEAVKFK EKGVKL+GFTDSSNV RH YMKDVYVF+ EP NT+A++AVSA+ARAMKE
Sbjct: 301 SAEWEAVKFKPEKGVKLMGFTDSSNVFRHHYMKDVYVFLPEPGNTRAMIAVSAVARAMKE 360

Query: 361 MNKVAILRCVWRQGQANVVIGVLTPNLSDGDNIPDSFYFNVLPFAEDVREFQFSSFTNFP 420
           MNKVAI+RCVWRQGQANVVIGVLTPNLSD +NIPDSFY NVLPFAEDVREFQF SFTNFP
Sbjct: 361 MNKVAIVRCVWRQGQANVVIGVLTPNLSDKENIPDSFYLNVLPFAEDVREFQFPSFTNFP 420

Query: 421 ASCQPNEQQLESAANLVKMLDLAPQGKEEVLRPDFTPNPVLERFYRFLEVKSKHPDAAVP 480
           AS QPN QQLE+AANL+K LDLAP G+EEVL PDFTPNPVLERFYR+LE+KSK PD AVP
Sbjct: 421 ASWQPNGQQLEAAANLIKTLDLAPHGQEEVLLPDFTPNPVLERFYRYLELKSKDPDVAVP 480

Query: 481 PIDDTLKKITEPDADLVLQNQSVIDAFCRSFELKENPLKK-RRLLQENISSSMDEEGKGN 539
           P+D TLKKITEPD DL+LQN+S ID+FCRSFELK NPLKK RRLL    S S DEE KGN
Sbjct: 481 PLDGTLKKITEPDTDLLLQNKSEIDSFCRSFELKGNPLKKSRRLLGGKRSFSNDEEVKGN 540

Query: 540 ITAQPANLI--ESVKVENIGDVTPVQDFEAMISRRDSPEWVVKAIKDMKNKIFDLVEDSN 597
           ITAQPANL    SV V  IGD+TPVQ FEA+ISRRDSP+WVVKAI +MKNKIFDLVEDS+
Sbjct: 541 ITAQPANLTGNASVNVGKIGDLTPVQYFEALISRRDSPDWVVKAINEMKNKIFDLVEDSH 600

Query: 598 DGDNYPKALECLVVLRKGCILEQEPKQFNDFLKHLCNFCREKNLDGFCEYLASKELTLIS 657
           +GDNYPKALECLV LRKGCILEQEP+QFNDFLKHL NFC+EKNL  FCEYLASKELTLIS
Sbjct: 601 EGDNYPKALECLVALRKGCILEQEPEQFNDFLKHLWNFCQEKNLPSFCEYLASKELTLIS 660

Query: 658 KTEAADSEVTDDEAR-SFLVKSE 679
           KTEA DSE TDD+AR  FLVKSE
Sbjct: 661 KTEAIDSENTDDKARKGFLVKSE 683


>Glyma17g00970.1 
          Length = 562

 Score =  681 bits (1758), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 383/649 (59%), Positives = 428/649 (65%), Gaps = 132/649 (20%)

Query: 66  YDHVVVLKNIKVVDGDIVEALQQLPRGTSNGDFLDAVIVGLDMLIKKFGETNKGKKRVCL 125
           Y HVVVLKN KVVD D VEALQQLPR T +GDFLD VIVG+DMLIKKFG TNKGKKR+CL
Sbjct: 1   YQHVVVLKNTKVVDEDTVEALQQLPRRTISGDFLDVVIVGVDMLIKKFGMTNKGKKRLCL 60

Query: 126 ITNAQCPIKYPFEGTKEEQVTAIAKQMTIHGMKMESIILRGKISQDGNKRTMDENDRLLN 185
           ITNA CP K   EGTKEEQVT IAKQMT HGMKMESIILRGK S         EN+RLL+
Sbjct: 61  ITNALCPSKESDEGTKEEQVTTIAKQMTAHGMKMESIILRGKFSMAA---YWYENERLLD 117

Query: 186 IFAEETSTRLLYVENPISLFGAIKTRTITPVTVFRGDLELSPKLRIK------------- 232
           IF++ETSTRL  VENP+SLFGA+KTR ITP  VF+GDLE SPKLRIK             
Sbjct: 118 IFSKETSTRLSCVENPVSLFGALKTRNITPAAVFKGDLEFSPKLRIKNNEYNLFGSYVYH 177

Query: 233 ----------------------------VMVYKKTAEEKFPTLKRYSDKAPLNDKYATHE 264
                                        M   KTAE+KFP+LK+YSDKAP NDKYA HE
Sbjct: 178 DLCTEFTIEDYLFSVTLFFFLLRLASRCCMQVGKTAEDKFPSLKKYSDKAPPNDKYAKHE 237

Query: 265 VKVEYEYKSSEDPDKVIPPDQRIKGYRYGPQIVPISSTEWEAVKFKTEKGVKLLGFTDSS 324
           VK                                     W+A+KFK EKGVKLLGFTDSS
Sbjct: 238 VK-------------------------------------WDAIKFKPEKGVKLLGFTDSS 260

Query: 325 NVLRHQYMKDVYVFIAEPENTKAILAVSALARAMKEMNKVAILRCVWRQGQANVVIGVLT 384
           NV RH +MKDVYVF+ E  NTKA+LA+SA+ARAMK+MNKVAI+RCVWR  QANV IGVLT
Sbjct: 261 NVFRHHHMKDVYVFLPESGNTKAMLALSAVARAMKQMNKVAIVRCVWRWEQANVFIGVLT 320

Query: 385 PNLSDGDNIPDSFYFNVLPFAEDVREFQFSSFTNFPASCQPNEQQLESAANLVKMLDLAP 444
           PNLS  +NI   F    +P            FTNFPAS QPN  QLE+AANL+K LDLAP
Sbjct: 321 PNLSVRENIV-GFVRVSIP------------FTNFPASWQPNGLQLEAAANLIKTLDLAP 367

Query: 445 QGKEEVLRPDFTPNPVLERFYRFLEVKSKHPDAAVPPIDDTLKKITEPD-ADLVLQNQSV 503
            G+  VL PDFT NPVLE FY  LE+K K PDAAVPP+D+TLKKITEPD ADL+L+ +S 
Sbjct: 368 HGQHGVLLPDFTSNPVLECFYCHLELKLKDPDAAVPPVDNTLKKITEPDHADLLLRKKSA 427

Query: 504 IDAFCRSFELKENPLKKRRLLQENISSSMDEEGKGNITAQPANLIESVKVENIGDVTPVQ 563
           ID+FC SFELK NPL +       I  S D+                   E IGD+TPVQ
Sbjct: 428 IDSFCSSFELKGNPLVR-------IYFSNDQ-------------------EKIGDLTPVQ 461

Query: 564 DFEAMISRRDSPEWVVKAIKDMKNKIFDLVEDSNDGDNYPKALECLVVLRKGCILEQEPK 623
           DFEA+ SRRDSP+WV KAI + K KIFDLV  S++GDNYPKALECLV          EPK
Sbjct: 462 DFEALFSRRDSPDWVEKAINETKKKIFDLVGYSHEGDNYPKALECLV----------EPK 511

Query: 624 QFNDFLKHLCNFCREKNLDGFCEYLASKELTLISKTEAAD-SEVTDDEA 671
           QFNDFLKHLCNFC+EK L  FC+Y ASKELTLISKTEA D  +  DDEA
Sbjct: 512 QFNDFLKHLCNFCQEKILHSFCKYFASKELTLISKTEAVDIHKFLDDEA 560


>Glyma06g37540.1 
          Length = 408

 Score =  380 bits (977), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 232/462 (50%), Positives = 278/462 (60%), Gaps = 76/462 (16%)

Query: 120 KKRVCLITNAQCPIKYPFEGTKEEQVTAIAKQMTIHGMKMESIILRGKISQDGNKRTMDE 179
           ++ VCLI NA+C IK   EGTKEEQVT IAKQMT HG+KMESII+RGK+SQD NK  MDE
Sbjct: 1   ERNVCLIRNAKCRIKEFDEGTKEEQVTTIAKQMTAHGIKMESIIMRGKLSQDANKGIMDE 60

Query: 180 NDRLLNIFAEETSTRLLYVENPISLFGAIKTRTITPVTVFRGDLELSPKLRIKVM---VY 236
           NDRLLNIF++ETSTRLLYVENPISLFGA++TR   PV V  G LE++P L IKV+   +Y
Sbjct: 61  NDRLLNIFSKETSTRLLYVENPISLFGALRTRNGAPVIVLEGHLEINPTLSIKVIYLSMY 120

Query: 237 KKTAEEKFPTLKRYSDKAPLNDKYATHEVKVEYE-----------YKSSEDPDKVIPPDQ 285
             + +  F  L ++S +   +DK    EV +  E           +     P  ++ P +
Sbjct: 121 PDSMDNLF--LIKFSTQLQ-HDKERNDEVWLCKENEPVLRVGGDFFHLRSTPFCLLSPAK 177

Query: 286 RIKGYRYGPQIVPISSTEWEAVKFKTEKGVKL--LGFTDSSN---VLRHQYMKDVYVFIA 340
           +   Y  G  +   + ++     F      +   + F   +N      H YMKDVYV + 
Sbjct: 178 KRNLYS-GLVVTSFNFSQSILSSFSCSHHYQCTSIPFIKHANNYLCCLHHYMKDVYVSLP 236

Query: 341 EPENTKAILAVSALARAMKEMNKVAILRCVWRQGQANVVIGVLTPNLSDGDNIPDSFYFN 400
           +P NT+A++AVS +ARAMKEMNKVAI+RCVWRQ  ANVVIGVLTPNLSD +NI       
Sbjct: 237 KPGNTRAMIAVSVVARAMKEMNKVAIVRCVWRQRHANVVIGVLTPNLSDKENI------- 289

Query: 401 VLPFAEDVREFQFSSFTNFPASCQPNEQQLESAANLVKMLDLAPQGKEEVLRPDFTPNPV 460
                    EFQF SFTNFPAS QPN QQLE+ ANL+K LDLAP G+EEVL PDFTPNPV
Sbjct: 290 -----VGWGEFQFPSFTNFPASWQPNGQQLEATANLIKKLDLAPHGQEEVLLPDFTPNPV 344

Query: 461 LERFYRFLEVKSKHPDAAVPPIDDTLKKITEPDADLVLQNQSVIDAFCRSFELKENPLKK 520
           LERFY FLE+KSK PD A                                        K 
Sbjct: 345 LERFYHFLELKSKDPDVAK---------------------------------------KS 365

Query: 521 RRLLQENISSSMDEEGKGNITAQPANLI--ESVKVENIGDVT 560
           RRLL    S S DEE KGNITAQPANLI   SVKV  IGD+T
Sbjct: 366 RRLLGGKRSFSNDEEVKGNITAQPANLIGNASVKVGKIGDLT 407


>Glyma06g37470.1 
          Length = 457

 Score =  346 bits (888), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 172/272 (63%), Positives = 197/272 (72%), Gaps = 51/272 (18%)

Query: 247 LKRYSDKAPLNDKYATHEVKVEYEYKSSEDPDKVIPPDQRIKGYRYGPQIVPISSTEWEA 306
           +K+YSDKAP  DK+  HEVK++YE+KSS+DPDKV+PP+QRIKGY YGPQIVPIS  EWEA
Sbjct: 1   MKKYSDKAPPKDKFGKHEVKIDYEHKSSKDPDKVVPPNQRIKGYPYGPQIVPISFAEWEA 60

Query: 307 VKFKTEKGVKLLGFTDSSNVLRHQYMKDVYVFIAEPENTKAILAVSALARAMKEMNKVAI 366
           VKFK EKGV+L+GFT SSNV RH YMKDVYV + +P NT+A++AVSA+ARAMKEMNKVAI
Sbjct: 61  VKFKPEKGVRLMGFTYSSNVFRHHYMKDVYVSLPKPGNTRAMIAVSAVARAMKEMNKVAI 120

Query: 367 LRCVWRQGQANVVIGVLTPNLSDGDNIPDSFYFNVLPFAEDVREFQFSSFTNFPASCQPN 426
           + CVWRQG ANVVIG            PDSFY N                          
Sbjct: 121 VCCVWRQGHANVVIG------------PDSFYLN-------------------------- 142

Query: 427 EQQLESAANLVKMLDLAPQGKEEVLRPDFTPNPVLERFYRFLEVKSKHPDAAVPPIDDTL 486
                        LDLAP G+EEVL PDFTPNPVLERFY +LE+KSK PD AVPP+DDTL
Sbjct: 143 -------------LDLAPHGQEEVLLPDFTPNPVLERFYHYLELKSKDPDVAVPPLDDTL 189

Query: 487 KKITEPDADLVLQNQSVIDAFCRSFELKENPL 518
           KKITEPDADL+LQN+S ID+FCRSFELK NPL
Sbjct: 190 KKITEPDADLLLQNKSEIDSFCRSFELKGNPL 221



 Score = 70.1 bits (170), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 32/48 (66%), Positives = 39/48 (81%)

Query: 573 DSPEWVVKAIKDMKNKIFDLVEDSNDGDNYPKALECLVVLRKGCILEQ 620
           +SP+WVVK I +MKNKIFDLVEDS++GDNY KALECLV L +   L +
Sbjct: 410 NSPDWVVKVINEMKNKIFDLVEDSHEGDNYLKALECLVALARVASLSR 457


>Glyma01g34370.1 
          Length = 241

 Score =  251 bits (641), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 124/157 (78%), Positives = 135/157 (85%)

Query: 108 MLIKKFGETNKGKKRVCLITNAQCPIKYPFEGTKEEQVTAIAKQMTIHGMKMESIILRGK 167
           MLIKK G TNKGKKR+CLITNAQC IK   EGT EEQVT IA QMT H MKMESIILRGK
Sbjct: 1   MLIKKIGVTNKGKKRLCLITNAQCLIKESDEGTMEEQVTTIANQMTAHVMKMESIILRGK 60

Query: 168 ISQDGNKRTMDENDRLLNIFAEETSTRLLYVENPISLFGAIKTRTITPVTVFRGDLELSP 227
           +SQD NK  MDENDRLLNIF++ETSTRL YVENPISLFGA++ R ITPVTVFRG+LE SP
Sbjct: 61  LSQDANKGIMDENDRLLNIFSKETSTRLSYVENPISLFGALRKRNITPVTVFRGNLEFSP 120

Query: 228 KLRIKVMVYKKTAEEKFPTLKRYSDKAPLNDKYATHE 264
           KL IKVMVYKKTAEEKFP+ K+YSDKAP NDK+A H+
Sbjct: 121 KLSIKVMVYKKTAEEKFPSRKKYSDKAPPNDKFAKHK 157



 Score =  135 bits (340), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 64/87 (73%), Positives = 75/87 (86%)

Query: 421 ASCQPNEQQLESAANLVKMLDLAPQGKEEVLRPDFTPNPVLERFYRFLEVKSKHPDAAVP 480
           A  +PN QQLE+AANL+K LDLAP G+EEVL PD TPNPVLERFY +LE+KSK PD AVP
Sbjct: 154 AKHKPNGQQLEAAANLIKTLDLAPHGQEEVLLPDLTPNPVLERFYCYLELKSKDPDVAVP 213

Query: 481 PIDDTLKKITEPDADLVLQNQSVIDAF 507
           P+DDTLKK+TEPDADL+L  +SVID+F
Sbjct: 214 PLDDTLKKVTEPDADLLLPIKSVIDSF 240