Miyakogusa Predicted Gene

Lj3g3v2722600.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2722600.2 CUFF.44498.2
         (438 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g09140.1                                                       214   1e-55

>Glyma07g09140.1 
          Length = 481

 Score =  214 bits (546), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 96/124 (77%), Positives = 106/124 (85%)

Query: 10  QTIFRNPKEVKPYAVPSSEYCNLPAAAIHASSDMVVVVDCNAPAAHVARHKWQPNTPDGQ 69
           QTIFRNPK +KPYAVPS E+CNLPAAA+H SS MV VV  NAPAA VA+HKWQPNTPDGQ
Sbjct: 115 QTIFRNPKAIKPYAVPSPEHCNLPAAAMHTSSHMVEVVGLNAPAAQVAQHKWQPNTPDGQ 174

Query: 70  GSPFLFQNGKAISDSASGTIVRMFKGPTGTGEQWQFPQALAFGVSGIRSQAIVSVTCDKE 129
           G+PF FQ+GKA S S  G + R FKGP GTGE+WQ+PQALAF VSGIRSQAIVS+TCDKE
Sbjct: 175 GTPFFFQHGKATSGSVGGNLTRTFKGPAGTGEEWQYPQALAFSVSGIRSQAIVSITCDKE 234

Query: 130 IITG 133
           IITG
Sbjct: 235 IITG 238



 Score =  197 bits (501), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 113/182 (62%), Positives = 127/182 (69%), Gaps = 25/182 (13%)

Query: 282 VAHTVCLSSEGLVITWNELQHTLSTFTLNGVLTATTELSFSSSISCMEVSVDGKNALIGI 341
           V +TVCLSS+G+V+TWNE Q  LSTFTLNGVL A TEL+FSSSISCME+SVDG++ALIGI
Sbjct: 279 VFYTVCLSSDGVVMTWNESQRILSTFTLNGVLIAKTELTFSSSISCMEISVDGRSALIGI 338

Query: 342 NSLENGRARNNDLNLQSSKPGIVDFNSESEKTHEGYRIDA--------------PTP-SI 386
           NS ENGRA NN LN QSS  GI  F SESE+TH   +I                  P S+
Sbjct: 339 NSQENGRAHNNSLNSQSSMSGIEAFYSESEETHHSNKIKMLHHHQVASWICTLWRYPLSV 398

Query: 387 CFLDLH----------TLEVFHVLKLEEGQDITTLALNKDNTNLLVSTMDKQLIIFTDPA 436
            F  L+          T  VFHVLKL+EGQDIT LAL KDNTNLLVST DKQLIIFTDPA
Sbjct: 399 GFSSLNRLTPNTNACKTFLVFHVLKLKEGQDITALALYKDNTNLLVSTWDKQLIIFTDPA 458

Query: 437 VS 438
           +S
Sbjct: 459 LS 460