Miyakogusa Predicted Gene

Lj3g3v2721430.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2721430.1 Non Chatacterized Hit- tr|I1I7S4|I1I7S4_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,59.84,1e-18,coiled-coil,NULL; seg,NULL; Lzipper-MIP1,Ternary
complex factor MIP1, leucine-zipper,CUFF.44493.1
         (259 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g06130.1                                                       211   7e-55
Glyma01g39120.1                                                       209   2e-54
Glyma17g20320.1                                                       159   3e-39
Glyma17g36350.1                                                        64   1e-10
Glyma14g08820.1                                                        60   2e-09
Glyma14g08820.2                                                        60   3e-09

>Glyma11g06130.1 
          Length = 572

 Score =  211 bits (536), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 126/224 (56%), Positives = 139/224 (62%), Gaps = 12/224 (5%)

Query: 31  SNRERKMALIQEIDKLKRKLRHEENVHRVLERXXXXXXXXXXXXXXXXXXXXXXXXXXXX 90
           SNRERKMAL Q++DKLKRKLR EENVHR LER                            
Sbjct: 22  SNRERKMALTQDVDKLKRKLRQEENVHRALERALTRPLGSLPRLPPYLPPQTLELVAEVA 81

Query: 91  XXXXXXXXXXXXXXNFRQGLCQKAFYISSKSNAE---DPMDQNSIRSTKHQRSKSLSQSE 147
                         NFRQGL Q+A YISSK NAE   D MDQNSIRS+KHQRSKSLSQSE
Sbjct: 82  VLEEEVVRLEEQVVNFRQGLYQEAVYISSKRNAENLRDSMDQNSIRSSKHQRSKSLSQSE 141

Query: 148 FNSTIIARXXXXXXXXXX------DIL---TGKLVKEKQMHTKQDSLSSIPEGRWGKENP 198
            NST +AR                DI+   TGKLV  KQ+H KQDSLSSIPE    KENP
Sbjct: 142 LNSTTMARPQLSLARSASSRKLFSDIVVDHTGKLVNGKQLHMKQDSLSSIPEEGQRKENP 201

Query: 199 LFCNSLKDKQSPEKERAKVISSIKKSPTKQEPADKCVDHLKLQL 242
           LF +SLKDKQSPEK+ AKVI+ +KKSP K+E ADKCVDHLKLQ+
Sbjct: 202 LFYSSLKDKQSPEKKTAKVITPVKKSPIKKESADKCVDHLKLQM 245


>Glyma01g39120.1 
          Length = 560

 Score =  209 bits (532), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 125/228 (54%), Positives = 140/228 (61%), Gaps = 12/228 (5%)

Query: 31  SNRERKMALIQEIDKLKRKLRHEENVHRVLERXXXXXXXXXXXXXXXXXXXXXXXXXXXX 90
           SNRERK+AL Q++DKLKRKLRHEENVHR LER                            
Sbjct: 22  SNRERKIALTQDVDKLKRKLRHEENVHRALERALTRPLGSLPRLPPYLPPHTLELVAEVA 81

Query: 91  XXXXXXXXXXXXXXNFRQGLCQKAFYISSKSNAE---DPMDQNSIRSTKHQRSKSLSQSE 147
                         NFRQGL Q+A YISSK NAE   D MDQNSIRS+KHQRSKSLSQSE
Sbjct: 82  VLEEEVVRLEEKVVNFRQGLYQEAVYISSKRNAENLRDSMDQNSIRSSKHQRSKSLSQSE 141

Query: 148 FNSTIIARXXXXXXXXXX------DILT---GKLVKEKQMHTKQDSLSSIPEGRWGKENP 198
            NST +AR                DI T   GKLV  K +H  QDSLSSIPE    KENP
Sbjct: 142 LNSTTMARPQISLARSASSRRLFSDIFTDHSGKLVNGKLLHINQDSLSSIPEEGRRKENP 201

Query: 199 LFCNSLKDKQSPEKERAKVISSIKKSPTKQEPADKCVDHLKLQLEWKI 246
           LF +SLKDKQSPEK+ AKVI+ +KKSP K+E ADKCVDHLKLQ+E ++
Sbjct: 202 LFYSSLKDKQSPEKKTAKVIAPVKKSPIKKESADKCVDHLKLQMEGRL 249


>Glyma17g20320.1 
          Length = 577

 Score =  159 bits (401), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 99/195 (50%), Positives = 111/195 (56%), Gaps = 14/195 (7%)

Query: 31  SNRERKMALIQEIDKLKRKLRHEENVHRVLERXXXXXXXXXXXXXXXXXXXXXXXXXXXX 90
           SNRERKMALIQ++DKLKRKLRHEENVHR LER                            
Sbjct: 42  SNRERKMALIQDVDKLKRKLRHEENVHRALERAFTRPLGSLPRLPPYLPPYTLELLAEVA 101

Query: 91  XXXXXXXXXXXXXXNFRQGLCQKAFYISSKSNAE---DPMDQNSIRSTKHQRSKSLSQSE 147
                         NFRQGL Q+A YISSK NAE   DP+DQN+IRS+KHQRSKS+SQSE
Sbjct: 102 VLEEEVVRLEEQVVNFRQGLYQEAVYISSKRNAENLNDPIDQNTIRSSKHQRSKSMSQSE 161

Query: 148 FNSTI--------IARXXXXXXXXXXDIL---TGKLVKEKQMHTKQDSLSSIPEGRWGKE 196
           FNST+        +AR          D +   T KLV  KQ+H K DS SSIPE   GKE
Sbjct: 162 FNSTLMMGRPQPSLARSASSRKLMFSDAVNDHTVKLVHGKQLHRKHDSFSSIPEDGRGKE 221

Query: 197 NPLFCNSLKDKQSPE 211
           N  F N +KDKQSPE
Sbjct: 222 NRSFGNFVKDKQSPE 236


>Glyma17g36350.1 
          Length = 524

 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 90/207 (43%), Gaps = 19/207 (9%)

Query: 31  SNRERKMALIQEIDKLKRKLRHEENVHRVLERXXXXXXXXXXXXXXXXXXXXXXXXXXXX 90
           S+RERK+AL Q++D+LK++LRHEEN+HR LER                            
Sbjct: 15  SSRERKLALQQDVDRLKKQLRHEENIHRALERAFNRPLGALPRLPPYLPPYILALLAEVA 74

Query: 91  XXXXXXXXXXXXXXNFRQGLCQKAFYISS------KSNAEDPMDQN-SIRSTKHQRSKSL 143
                         +FRQ L Q+A Y+SS       S +  P   N ++ S K  + KSL
Sbjct: 75  VLEEEIVRLEEQVVHFRQDLYQEAVYMSSSMRKLENSVSAPPNKSNPTLDSPKLDKLKSL 134

Query: 144 SQSEFNSTIIARXXXXXXXXXXDILTGKLVKEKQMHTKQDSLSSIPEGRWGKENPLFCNS 203
           +Q+  NST  +           D+++               +  +PE R GKEN  F N 
Sbjct: 135 TQTAGNSTATSETKPTTTLTERDLVSSSWFV--------PVVFGLPEDRQGKENQSF-NH 185

Query: 204 LKDKQSPEKERAKVISSIKKSPTKQEP 230
            +     +KER   + SI ++  +QEP
Sbjct: 186 CRKGWIIQKERC--VMSIFQN-VQQEP 209


>Glyma14g08820.1 
          Length = 543

 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/135 (33%), Positives = 63/135 (46%), Gaps = 7/135 (5%)

Query: 24  SQRNRCLSNRERKMALIQEIDKLKRKLRHEENVHRVLERXXXXXXXXXXXXXXXXXXXXX 83
           + ++R  S+RERK+AL Q++D LK+KLRHEEN+HR LER                     
Sbjct: 9   ANKSRKASSRERKLALQQDVDTLKKKLRHEENIHRALERAFNRPLGALPRLPPYLPPYIP 68

Query: 84  XXXXXXXXXXXXXXXXXXXXXNFRQGLCQKAFYISS------KSNAEDPMDQN-SIRSTK 136
                                +FRQ L Q+A Y+SS       S +  P   N ++ S K
Sbjct: 69  ALLAEVAVLEEEIVRLEEQVVHFRQDLYQEAVYMSSSMRKLENSVSAPPNKSNPTMDSPK 128

Query: 137 HQRSKSLSQSEFNST 151
             + KSL+Q+  NST
Sbjct: 129 LDKLKSLTQTTGNST 143


>Glyma14g08820.2 
          Length = 393

 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 45/135 (33%), Positives = 63/135 (46%), Gaps = 7/135 (5%)

Query: 24  SQRNRCLSNRERKMALIQEIDKLKRKLRHEENVHRVLERXXXXXXXXXXXXXXXXXXXXX 83
           + ++R  S+RERK+AL Q++D LK+KLRHEEN+HR LER                     
Sbjct: 9   ANKSRKASSRERKLALQQDVDTLKKKLRHEENIHRALERAFNRPLGALPRLPPYLPPYIP 68

Query: 84  XXXXXXXXXXXXXXXXXXXXXNFRQGLCQKAFYISS------KSNAEDPMDQN-SIRSTK 136
                                +FRQ L Q+A Y+SS       S +  P   N ++ S K
Sbjct: 69  ALLAEVAVLEEEIVRLEEQVVHFRQDLYQEAVYMSSSMRKLENSVSAPPNKSNPTMDSPK 128

Query: 137 HQRSKSLSQSEFNST 151
             + KSL+Q+  NST
Sbjct: 129 LDKLKSLTQTTGNST 143