Miyakogusa Predicted Gene
- Lj3g3v2720160.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v2720160.1 Non Chatacterized Hit- tr|I1JKI3|I1JKI3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.42209
PE,63.93,0,seg,NULL; PAP/OAS1 substrate-binding domain,NULL;
Nucleotidyltransferase,NULL; PAP_assoc,PAP/25A-ass,CUFF.44497.1
(744 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma03g02290.1 830 0.0
Glyma07g09020.1 710 0.0
Glyma11g34420.1 99 3e-20
Glyma06g16630.1 98 4e-20
Glyma06g16630.3 93 1e-18
Glyma06g16630.2 93 1e-18
Glyma18g03900.1 87 7e-17
Glyma13g35290.1 60 6e-09
Glyma13g35290.2 58 3e-08
>Glyma03g02290.1
Length = 731
Score = 830 bits (2143), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 475/794 (59%), Positives = 531/794 (66%), Gaps = 113/794 (14%)
Query: 1 MHGGGGDFPSPQPPNSGEYLLSLIXXXXXXXXXXXXXXXXXXXXXXAIDPAVAFMGPSIP 60
M+GGGGD P P N GE+LLSLI AIDPAV +GP IP
Sbjct: 1 MNGGGGDLP---PSNGGEFLLSLIQQRPHHPHPPPQSP--------AIDPAVTAIGPMIP 49
Query: 61 VAASPWQSNGLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---XFFGLPHNPFPQPRPT 117
VA PWQ G D FFGLPHNPFP PR
Sbjct: 50 VALPPWQIAGGDQPHHHQHTHPHHLPPPPPWSHTLSSSSPLYPPNFFGLPHNPFPPPR-- 107
Query: 118 GNHYPAA----AAQLHYNSGAALSDDLRRLGFPIEGNDKST---------FVQQQ----- 159
NH+P + N+ L+ DLR+LGFPIE + + FV
Sbjct: 108 -NHFPVTVTPNSVTNGVNANVNLAHDLRKLGFPIEESHHNNNNNNNVVDGFVHHHHQQQQ 166
Query: 160 ----ELKLKFGSLPSVSYASSPEVPSNGDSLPNLKFDNGFDRNLHVDPKSGPN-----NH 210
ELKL+FGSLP+V+YA++ EV SNGDSL NLKF+ G + +H S N NH
Sbjct: 167 QQQHELKLQFGSLPTVAYAAA-EVSSNGDSLLNLKFNRGGNV-VHPTSNSSGNVVLQGNH 224
Query: 211 GVV-------GGYRVLGS-APETTRXXXXXGFGNKSRGTGYWGSGTTRKGSEVGEDRGLA 262
V GGY GS PET+R GFGN+ RG G G
Sbjct: 225 DAVERERRGLGGYMAGGSLPPETSRVAP--GFGNRIRGKGLEG----------------- 265
Query: 263 VGSGEFGARNENLHSKKESGRMGSGGRSNTRGNVAREVGLPDQIDXXXXXXXXXXXXXXX 322
RNENL+ ++E GRM SG RSN VGL DQ+D
Sbjct: 266 --------RNENLYGRREGGRMVSGERSN--------VGLVDQLDRPGPPARSHL----- 304
Query: 323 XXIEESRSSLNRVGVVEDGVSD-KHMGVG--------SRGG--ADVDLLGEQIVESLLLE 371
S S G+ E G D KH G G GG ADVD+LGEQ+ +SLL+E
Sbjct: 305 ----HSGSGNETSGIGEVGGRDSKHKGGGRLRMEGFPESGGRVADVDVLGEQLADSLLVE 360
Query: 372 DESDDKNNNSKQRRTPREKDARLLDSRGEQMLSQRGRMYKRQMMCRRDIDSFNGSFLAIY 431
DESDD+ N +QRR REKD R LDSRG+Q++SQRGRMY+RQMMCRRDID FN FLAIY
Sbjct: 361 DESDDRTN-LRQRR--REKDVRFLDSRGQQIMSQRGRMYRRQMMCRRDIDDFNVPFLAIY 417
Query: 432 ESLIPPEEEKLKQKQLLGVLENLVSKEWPTSKLYLYGSCANSFGVSKSDIDVCLAIKEAE 491
SLIPPEEEKLKQKQL+ +LE LVSKEWPTS LYLYGSCANSFGVSKSDIDVCLAI+EA+
Sbjct: 418 GSLIPPEEEKLKQKQLVAILEKLVSKEWPTSNLYLYGSCANSFGVSKSDIDVCLAIEEAD 477
Query: 492 -DKSKIIMKLADILQSDNLQNVQALTRARVPIVKLMDPATGISCDICVNNILAVVNTKLL 550
+KSKIIMKLADILQSDNLQNVQALTRARVPIVKLMDP TGISCDIC+NN+LAVVNTKLL
Sbjct: 478 MEKSKIIMKLADILQSDNLQNVQALTRARVPIVKLMDPVTGISCDICINNLLAVVNTKLL 537
Query: 551 RDYGLIDARLRQLAFIIKHWAKSRGVNETYHGTLSSYAYVLMCIHFLQLRRPAILPCLQE 610
RDY ID RLRQLAFIIKHWAKSR VNETYHGTLSSYAYVLMCIHFLQ+RRPAILPCLQE
Sbjct: 538 RDYAHIDPRLRQLAFIIKHWAKSRRVNETYHGTLSSYAYVLMCIHFLQMRRPAILPCLQE 597
Query: 611 MESTYSVTVDDTYCSYFDQVDRLCNFGRNNKETIARLVWGFFYYWAYCHDYANTVISVRT 670
ME+TYSVTVDD +C+YFDQV++LC+FGR+NKE+IA+LV GFF+YWAYCHDYANTVISVRT
Sbjct: 598 METTYSVTVDDVHCAYFDQVEKLCDFGRHNKESIAQLVRGFFHYWAYCHDYANTVISVRT 657
Query: 671 GSILSKREKDWTRRIGNDRHLICIEDPFETSHDLGRVVDKRSIKVLREEFERAADIMQND 730
GSI+SKREKDWTRRIGNDRHLICIEDPFE SHDLGRVVDK SIKVLREEFERAA++MQND
Sbjct: 658 GSIISKREKDWTRRIGNDRHLICIEDPFEISHDLGRVVDKHSIKVLREEFERAAEVMQND 717
Query: 731 PNPCIKLFEPYVRS 744
PNPCIKLFEPYV S
Sbjct: 718 PNPCIKLFEPYVPS 731
>Glyma07g09020.1
Length = 460
Score = 710 bits (1832), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/473 (75%), Positives = 396/473 (83%), Gaps = 25/473 (5%)
Query: 284 MGSGGRSNTRGNVAREVGLPDQIDXXXXXXXXXXXXXXXXXIEESRSSLNRVGVVEDGVS 343
M SG RSN RGNV ++GL DQ+D S N G+ E G
Sbjct: 1 MVSGERSNVRGNVGHKMGLVDQLDRPGPPAGSHLHS----------GSGNDAGIGEVGGR 50
Query: 344 D-KHMGVGSR----------GGADVDLLGEQIVESLLLEDESDDKNNNSKQRRTPREKDA 392
D KH +G GGADVD+LGEQ+ +SLL++DESDD+ N +QRR REKD
Sbjct: 51 DGKHKEIGRLRMEGVPESGGGGADVDVLGEQLADSLLVKDESDDRTN-LRQRR--REKDV 107
Query: 393 RLLDSRGEQMLSQRGRMYKRQMMCRRDIDSFNGSFLAIYESLIPPEEEKLKQKQLLGVLE 452
RL DSRG+Q++SQRGRMY+RQMMCRRDID FN FLAIY SLIPPEEEKLKQK+L+ +LE
Sbjct: 108 RLSDSRGQQIMSQRGRMYRRQMMCRRDIDVFNVPFLAIYGSLIPPEEEKLKQKKLVALLE 167
Query: 453 NLVSKEWPTSKLYLYGSCANSFGVSKSDIDVCLAIKEAE-DKSKIIMKLADILQSDNLQN 511
LVSKEWPT+KLYLYGSCANSFGVSKSDIDVCLAI+EA+ +KSKIIMKLADILQSDNLQN
Sbjct: 168 KLVSKEWPTAKLYLYGSCANSFGVSKSDIDVCLAIEEADMEKSKIIMKLADILQSDNLQN 227
Query: 512 VQALTRARVPIVKLMDPATGISCDICVNNILAVVNTKLLRDYGLIDARLRQLAFIIKHWA 571
VQALTRARVPIVKLMDP TGISCDIC+NN+LAVVNTKLLRDY ID RLRQLAFIIKHWA
Sbjct: 228 VQALTRARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAHIDPRLRQLAFIIKHWA 287
Query: 572 KSRGVNETYHGTLSSYAYVLMCIHFLQLRRPAILPCLQEMESTYSVTVDDTYCSYFDQVD 631
KSR VNETYHGTLSSYAYVLMCIHFLQ+RRPAILPCLQEME+TYSVTVDD +C+YFDQV+
Sbjct: 288 KSRRVNETYHGTLSSYAYVLMCIHFLQMRRPAILPCLQEMETTYSVTVDDIHCAYFDQVE 347
Query: 632 RLCNFGRNNKETIARLVWGFFYYWAYCHDYANTVISVRTGSILSKREKDWTRRIGNDRHL 691
+L +FGR+NKE+IA+LV GFF+YWAYCHDYANTVISVRTGSI+SKREKDWTRRIGNDRHL
Sbjct: 348 KLSDFGRHNKESIAQLVRGFFHYWAYCHDYANTVISVRTGSIISKREKDWTRRIGNDRHL 407
Query: 692 ICIEDPFETSHDLGRVVDKRSIKVLREEFERAADIMQNDPNPCIKLFEPYVRS 744
ICIEDPFE SHDLGRVVDK SIKVLREEFERAA+IMQNDPNPCIKLFEPYV S
Sbjct: 408 ICIEDPFEISHDLGRVVDKHSIKVLREEFERAAEIMQNDPNPCIKLFEPYVPS 460
>Glyma11g34420.1
Length = 455
Score = 98.6 bits (244), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 132/286 (46%), Gaps = 32/286 (11%)
Query: 467 YGSCANSFGVSKSDIDVC------LAIKEAEDKSKIIMKLADILQSDNLQ----NVQALT 516
YGS ++ D+D+ L I A K K + L ++L++ ++ N+Q ++
Sbjct: 53 YGSFVSNLFTRWGDLDISIELSNGLHISSAGKKQKQTL-LGEVLKALRMKGGGSNLQFIS 111
Query: 517 RARVPIVKLMDPATGISCDICVNNILAVVNTKLLRDYGLIDARLRQLAFIIKHWAKSRGV 576
ARVPI+K G+SCDI +NN+ + +K+L ID R R + ++K WAK+ +
Sbjct: 112 NARVPILKFKSYRQGVSCDISINNLPGQMKSKILLWINKIDGRFRHMVLLVKEWAKAHKI 171
Query: 577 NETYHGTLSSYAYVLMCIHFLQLRRPAILPCLQEMESTYSVTVDDTYCSYFDQ---VDRL 633
N + GT +SY+ L+ I + Q PAI P L+++ +DD D +
Sbjct: 172 NNSKAGTFNSYSLSLLVIFYFQTCIPAIFPPLKDIYP--GNMIDDLIGIRSDAENLIAET 229
Query: 634 CNFGRN----------NKETIARLVWGFFYYWAYCHDYANTV-ISVRTGSILSKREKDWT 682
C+ N N++++A L F +A A + I TG K E+
Sbjct: 230 CDANINRFISNRARSINRKSVAELFVDFVGKFAKMDSMAVEMGICPYTG----KWEQIED 285
Query: 683 RRIGNDR-HLICIEDPFETSHDLGRVVDKRSIKVLREEFERAADIM 727
I + + I +EDPFE + R V +K + E F R D++
Sbjct: 286 NMIWLPKTYAIFVEDPFEQPQNTARSVSAGQLKKITETFARTHDLL 331
>Glyma06g16630.1
Length = 334
Score = 97.8 bits (242), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 116/259 (44%), Gaps = 30/259 (11%)
Query: 467 YGSCANSFGVSKSDIDVCLAIK---EAEDKSKIIM------KLADILQSDNLQNVQALTR 517
YGS KSDID+ L E + KI KL I ++ +Q +
Sbjct: 83 YGSFVMDMFDGKSDIDLSLNFNNSIEVSRQKKISALYRFNKKLQSIQSKGHVTGLQLIFS 142
Query: 518 ARVPIVKLMDPATGISCDICVNNILAVVNTKLLRDYGLIDARLRQLAFIIKHWAKSRGVN 577
ARVPI+K+ D TGI CD+ V+N + + ++R ID R R+L F++K WAK +N
Sbjct: 143 ARVPIIKVTDSGTGIECDLSVDNRDGINKSHIIRAISDIDERFRKLCFLMKSWAKVHDIN 202
Query: 578 ETYHGTLSSYAYVLMCIHFLQLRRPAILP----CLQEMES-TYSVTVDDTYCSYFDQVDR 632
TLSS++ V LQ R P ILP L+E ++ Y V +TY
Sbjct: 203 SPKDSTLSSFSIVSFVAFHLQTRNPPILPPFSILLKEGDNPAYVAKVVETY--------- 253
Query: 633 LCNFGRNNKETIARLVWGFFYYWAYCHDYANTVISVRTGSILSKREKDWTRRIGNDRHLI 692
N+G+ NKE++A L A + + G S E W + + +
Sbjct: 254 -FNYGKQNKESLAMLFITLLVKLASVENLW------QKGFCASLYEGSWILKSWKCSYSM 306
Query: 693 CIEDPFETSHDLGRVVDKR 711
+ED + S ++ R V K+
Sbjct: 307 SVEDFIDRSQNVARAVRKK 325
>Glyma06g16630.3
Length = 324
Score = 93.2 bits (230), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 95/195 (48%), Gaps = 24/195 (12%)
Query: 467 YGSCANSFGVSKSDIDVCLAIK---EAEDKSKIIM------KLADILQSDNLQNVQALTR 517
YGS KSDID+ L E + KI KL I ++ +Q +
Sbjct: 91 YGSFVMDMFDGKSDIDLSLNFNNSIEVSRQKKISALYRFNKKLQSIQSKGHVTGLQLIFS 150
Query: 518 ARVPIVKLMDPATGISCDICVNNILAVVNTKLLRDYGLIDARLRQLAFIIKHWAKSRGVN 577
ARVPI+K+ D TGI CD+ V+N + + ++R ID R R+L F++K WAK +N
Sbjct: 151 ARVPIIKVTDSGTGIECDLSVDNRDGINKSHIIRAISDIDERFRKLCFLMKSWAKVHDIN 210
Query: 578 ETYHGTLSSYAYVLMCIHFLQLRRPAILP----CLQEMES-TYSVTVDDTYCSYFDQVDR 632
TLSS++ V LQ R P ILP L+E ++ Y V +TY
Sbjct: 211 SPKDSTLSSFSIVSFVAFHLQTRNPPILPPFSILLKEGDNPAYVAKVVETY--------- 261
Query: 633 LCNFGRNNKETIARL 647
N+G+ NKE++A L
Sbjct: 262 -FNYGKQNKESLAML 275
>Glyma06g16630.2
Length = 316
Score = 92.8 bits (229), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 95/195 (48%), Gaps = 24/195 (12%)
Query: 467 YGSCANSFGVSKSDIDVCLAIK---EAEDKSKIIM------KLADILQSDNLQNVQALTR 517
YGS KSDID+ L E + KI KL I ++ +Q +
Sbjct: 83 YGSFVMDMFDGKSDIDLSLNFNNSIEVSRQKKISALYRFNKKLQSIQSKGHVTGLQLIFS 142
Query: 518 ARVPIVKLMDPATGISCDICVNNILAVVNTKLLRDYGLIDARLRQLAFIIKHWAKSRGVN 577
ARVPI+K+ D TGI CD+ V+N + + ++R ID R R+L F++K WAK +N
Sbjct: 143 ARVPIIKVTDSGTGIECDLSVDNRDGINKSHIIRAISDIDERFRKLCFLMKSWAKVHDIN 202
Query: 578 ETYHGTLSSYAYVLMCIHFLQLRRPAILP----CLQEMES-TYSVTVDDTYCSYFDQVDR 632
TLSS++ V LQ R P ILP L+E ++ Y V +TY
Sbjct: 203 SPKDSTLSSFSIVSFVAFHLQTRNPPILPPFSILLKEGDNPAYVAKVVETY--------- 253
Query: 633 LCNFGRNNKETIARL 647
N+G+ NKE++A L
Sbjct: 254 -FNYGKQNKESLAML 267
>Glyma18g03900.1
Length = 260
Score = 87.0 bits (214), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 83/155 (53%), Gaps = 11/155 (7%)
Query: 467 YGSCANSFGVSKSDIDVC------LAIKEAEDKSKIIMKLADILQSDNLQ----NVQALT 516
+GS ++ D+D+ L I A K K L D+L++ ++ N+Q ++
Sbjct: 53 FGSFVSNLFTRWGDLDISIELSNGLHISSAGKKQKQTF-LGDVLKALRMKGGGSNLQFIS 111
Query: 517 RARVPIVKLMDPATGISCDICVNNILAVVNTKLLRDYGLIDARLRQLAFIIKHWAKSRGV 576
ARVPI+K G+SCDI +NN+ + +K+L ID R R + ++K WAK+ +
Sbjct: 112 NARVPILKFKSYRQGVSCDISINNLPGQMKSKILLWINKIDGRFRHMVLLVKEWAKAHKI 171
Query: 577 NETYHGTLSSYAYVLMCIHFLQLRRPAILPCLQEM 611
N + GT +SY+ L+ I + Q PAI P L+++
Sbjct: 172 NNSKAGTFNSYSLSLLVIFYFQTCIPAIFPPLKDI 206
>Glyma13g35290.1
Length = 527
Score = 60.5 bits (145), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 117/278 (42%), Gaps = 40/278 (14%)
Query: 434 LIPPEEEKLKQKQLLGVLENLVSKEWPTSKLYLY---GSCANSFGVSKSDIDVCLAIKEA 490
L P EEK + + + +V WP + +++ G + SD+DV +
Sbjct: 127 LSPTAEEKAARDLAIESVFGVVKHIWPHCQSFMWRCSGLSGQWLYLPTSDVDVVILKSGL 186
Query: 491 EDKSKIIMKLADIL-QSDNLQNVQALTRARVPIVKLMDPATGISCDICVNNILAVVNTKL 549
++ + ++ L Q + +Q + +ARVPI+K ++ +GI+ DI + +
Sbjct: 187 QNPQIGLNAISKALSQRGMAKKIQVIGKARVPIIKFVEKRSGIAFDISFDIDNGPKAAEY 246
Query: 550 LRDYGLIDARLRQLAFIIKHWAKSRGVNETYHGTLSSYAYVLMCIHFLQLRRPAILPCLQ 609
+++ + LR L I+K + + R +NE Y G + SYA + M + L+ R L
Sbjct: 247 IQEAVVKWPPLRPLCLILKVFLQQRELNEVYSGGIGSYALLTMLMAMLRNLR------LS 300
Query: 610 EMESTYSVTVDDTYCSYFDQVDRLCNFGRNNKETIARLVWGFFYYWAYCHDYANTVISVR 669
+ + +++ V L+ FF ++ + ++ +S
Sbjct: 301 QASAEHNLGV---------------------------LLVHFFDFYGRKLNTSDVGVSCN 333
Query: 670 -TGSILSKREKDWTRRIGNDRHLICIEDPFETSHDLGR 706
TG+ K K + R LI IEDP +D+G+
Sbjct: 334 GTGTFFVKSSKGFLNR--GRPSLIAIEDPQAPENDIGK 369
>Glyma13g35290.2
Length = 384
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 117/278 (42%), Gaps = 40/278 (14%)
Query: 434 LIPPEEEKLKQKQLLGVLENLVSKEWPTSKLYLY---GSCANSFGVSKSDIDVCLAIKEA 490
L P EEK + + + +V WP + +++ G + SD+DV +
Sbjct: 127 LSPTAEEKAARDLAIESVFGVVKHIWPHCQSFMWRCSGLSGQWLYLPTSDVDVVILKSGL 186
Query: 491 EDKSKIIMKLADIL-QSDNLQNVQALTRARVPIVKLMDPATGISCDICVNNILAVVNTKL 549
++ + ++ L Q + +Q + +ARVPI+K ++ +GI+ DI + +
Sbjct: 187 QNPQIGLNAISKALSQRGMAKKIQVIGKARVPIIKFVEKRSGIAFDISFDIDNGPKAAEY 246
Query: 550 LRDYGLIDARLRQLAFIIKHWAKSRGVNETYHGTLSSYAYVLMCIHFLQLRRPAILPCLQ 609
+++ + LR L I+K + + R +NE Y G + SYA + M + L+ R L
Sbjct: 247 IQEAVVKWPPLRPLCLILKVFLQQRELNEVYSGGIGSYALLTMLMAMLRNLR------LS 300
Query: 610 EMESTYSVTVDDTYCSYFDQVDRLCNFGRNNKETIARLVWGFFYYWAYCHDYANTVISVR 669
+ + +++ V L+ FF ++ + ++ +S
Sbjct: 301 QASAEHNLGV---------------------------LLVHFFDFYGRKLNTSDVGVSCN 333
Query: 670 -TGSILSKREKDWTRRIGNDRHLICIEDPFETSHDLGR 706
TG+ K K + R LI IEDP +D+G+
Sbjct: 334 GTGTFFVKSSKGFLNR--GRPSLIAIEDPQAPENDIGK 369