Miyakogusa Predicted Gene

Lj3g3v2693310.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2693310.1 Non Chatacterized Hit- tr|E0VPJ7|E0VPJ7_PEDHC
Putative uncharacterized protein OS=Pediculus humanus ,26.19,3e-18,RNA
recognition motif,RNA recognition motif domain; RNA-binding domain,
RBD,NULL; RRM,RNA recognitio,CUFF.44440.1
         (267 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g20730.2                                                       430   e-121
Glyma07g01330.1                                                       427   e-120
Glyma08g20730.1                                                       425   e-119
Glyma07g01330.2                                                       411   e-115
Glyma01g39560.1                                                       171   8e-43
Glyma08g23850.1                                                       113   2e-25
Glyma11g05690.1                                                        95   7e-20
Glyma11g05690.2                                                        95   9e-20
Glyma07g00560.2                                                        79   5e-15
Glyma07g00560.1                                                        79   6e-15

>Glyma08g20730.2 
          Length = 264

 Score =  430 bits (1106), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 215/267 (80%), Positives = 223/267 (83%), Gaps = 3/267 (1%)

Query: 1   MDQQPFDPYFLYQQDERSNINTLFVSGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRANQ 60
           M Q PFDP++LYQ DE+SNINTLFVSGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRANQ
Sbjct: 1   MAQPPFDPFYLYQHDEQSNINTLFVSGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRANQ 60

Query: 61  VVAFATFFNHQSAMAALHALNGVKFDPQTGSVLHIELARSNSRRKRKPGGGAYVVIDKRS 120
           VVAFATFFNHQSAMAALHALNGVKFDPQTGSVLHIELARSNSRRKRKPG GAYVVIDKRS
Sbjct: 61  VVAFATFFNHQSAMAALHALNGVKFDPQTGSVLHIELARSNSRRKRKPGSGAYVVIDKRS 120

Query: 121 KGETNVQXXXXXXXXXXXXXXXXXXXNHGDLATTQSGETAVGSDSAVPLGSEQHEKGGGD 180
           KGE ++Q                   N GDLA   S ETAVGSD+AV +  EQH K G  
Sbjct: 121 KGEPDLQGSSSEDGDSDPDEPSDSGDNQGDLAIMTSDETAVGSDNAVSV--EQHGK-GST 177

Query: 181 GGPCSTLFIANLGPNCTEDELKQALSVYTGFNMVKMRSRGGMPVAFADFEEIDQATKVLE 240
           GG CSTLFIANLGPNCTEDELKQA S YTGFNMVKMRSRGGMPVAF DFEE  QA KV+E
Sbjct: 178 GGLCSTLFIANLGPNCTEDELKQAFSAYTGFNMVKMRSRGGMPVAFVDFEETHQAAKVME 237

Query: 241 ELQGSSLPSSDRGGMHIEYARSKMRKR 267
           ELQGS LPSSDRGGMHIEYARSKMRKR
Sbjct: 238 ELQGSLLPSSDRGGMHIEYARSKMRKR 264


>Glyma07g01330.1 
          Length = 265

 Score =  427 bits (1099), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 216/268 (80%), Positives = 223/268 (83%), Gaps = 4/268 (1%)

Query: 1   MDQQPFDPYFLYQQ-DERSNINTLFVSGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRAN 59
           M   P DPY+LYQQ DERSNINTLFVSGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRAN
Sbjct: 1   MAHPPLDPYYLYQQQDERSNINTLFVSGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRAN 60

Query: 60  QVVAFATFFNHQSAMAALHALNGVKFDPQTGSVLHIELARSNSRRKRKPGGGAYVVIDKR 119
           QVVAFATFFNHQSAMAALHALNGVKFDPQTGSVLHIELARSNSRRKRKPGG AYVVIDKR
Sbjct: 61  QVVAFATFFNHQSAMAALHALNGVKFDPQTGSVLHIELARSNSRRKRKPGGEAYVVIDKR 120

Query: 120 SKGETNVQXXXXXXXXXXXXXXXXXXXNHGDLATTQSGETAVGSDSAVPLGSEQHEKGGG 179
           S GE ++Q                   N GD+A   S ETAVGSD+AV +  EQH KG  
Sbjct: 121 STGEPDLQGSSSDDGDSDPDEPSDSGDNQGDIAIMTSDETAVGSDNAVSV--EQHGKGSA 178

Query: 180 DGGPCSTLFIANLGPNCTEDELKQALSVYTGFNMVKMRSRGGMPVAFADFEEIDQATKVL 239
            GG CSTLFIANLGPNCTEDELKQA SVYTGFNMVKMRSRGGMPVAF DFEE DQA KV+
Sbjct: 179 -GGLCSTLFIANLGPNCTEDELKQAFSVYTGFNMVKMRSRGGMPVAFVDFEETDQAAKVV 237

Query: 240 EELQGSSLPSSDRGGMHIEYARSKMRKR 267
           EELQGS LPSSDRGGMHIEYARSKMRKR
Sbjct: 238 EELQGSLLPSSDRGGMHIEYARSKMRKR 265


>Glyma08g20730.1 
          Length = 277

 Score =  425 bits (1092), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 215/278 (77%), Positives = 223/278 (80%), Gaps = 12/278 (4%)

Query: 1   MDQQPFDPYFLYQQDERSNINTLFVSGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRANQ 60
           M Q PFDP++LYQ DE+SNINTLFVSGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRANQ
Sbjct: 1   MAQPPFDPFYLYQHDEQSNINTLFVSGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRANQ 60

Query: 61  VVAFATFFNHQSAMAALHALNGVKFDPQTGSVLHIELARSNSRRKRKPGGGAYVVIDKRS 120
           VVAFATFFNHQSAMAALHALNGVKFDPQTGSVLHIELARSNSRRKRKPG GAYVVIDKRS
Sbjct: 61  VVAFATFFNHQSAMAALHALNGVKFDPQTGSVLHIELARSNSRRKRKPGSGAYVVIDKRS 120

Query: 121 KGETNVQXXXXXXXXXXXXXXXXXXXNHGDLATTQSGETAVGSDSAVPL----------- 169
           KGE ++Q                   N GDLA   S ETAVGSD+AV +           
Sbjct: 121 KGEPDLQGSSSEDGDSDPDEPSDSGDNQGDLAIMTSDETAVGSDNAVSVHIEFMSFPSVF 180

Query: 170 GSEQHEKGGGDGGPCSTLFIANLGPNCTEDELKQALSVYTGFNMVKMRSRGGMPVAFADF 229
             EQH K G  GG CSTLFIANLGPNCTEDELKQA S YTGFNMVKMRSRGGMPVAF DF
Sbjct: 181 QQEQHGK-GSTGGLCSTLFIANLGPNCTEDELKQAFSAYTGFNMVKMRSRGGMPVAFVDF 239

Query: 230 EEIDQATKVLEELQGSSLPSSDRGGMHIEYARSKMRKR 267
           EE  QA KV+EELQGS LPSSDRGGMHIEYARSKMRKR
Sbjct: 240 EETHQAAKVMEELQGSLLPSSDRGGMHIEYARSKMRKR 277


>Glyma07g01330.2 
          Length = 261

 Score =  411 bits (1057), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 208/264 (78%), Positives = 217/264 (82%), Gaps = 4/264 (1%)

Query: 1   MDQQPFDPYFLYQQ-DERSNINTLFVSGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRAN 59
           M   P DPY+LYQQ DERSNINTLFVSGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRAN
Sbjct: 1   MAHPPLDPYYLYQQQDERSNINTLFVSGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRAN 60

Query: 60  QVVAFATFFNHQSAMAALHALNGVKFDPQTGSVLHIELARSNSRRKRKPGGGAYVVIDKR 119
           QVVAFATFFNHQSAMAALHALNGVKFDPQTGSVLHIELARSNSRRKRKPGG AYVVIDKR
Sbjct: 61  QVVAFATFFNHQSAMAALHALNGVKFDPQTGSVLHIELARSNSRRKRKPGGEAYVVIDKR 120

Query: 120 SKGETNVQXXXXXXXXXXXXXXXXXXXNHGDLATTQSGETAVGSDSAVPLGSEQHEKGGG 179
           S GE ++Q                   N GD+A   S ETAVGSD+AV +  EQH KG  
Sbjct: 121 STGEPDLQGSSSDDGDSDPDEPSDSGDNQGDIAIMTSDETAVGSDNAVSV--EQHGKGSA 178

Query: 180 DGGPCSTLFIANLGPNCTEDELKQALSVYTGFNMVKMRSRGGMPVAFADFEEIDQATKVL 239
            GG CSTLFIANLGPNCTEDELKQA SVYTGFNMVKMRSRGGMPVAF DFEE DQA KV+
Sbjct: 179 -GGLCSTLFIANLGPNCTEDELKQAFSVYTGFNMVKMRSRGGMPVAFVDFEETDQAAKVV 237

Query: 240 EELQGSSLPSSDRGGMHIEYARSK 263
           EELQGS LPSSDRGGMHIEY  ++
Sbjct: 238 EELQGSLLPSSDRGGMHIEYLLTR 261


>Glyma01g39560.1 
          Length = 304

 Score =  171 bits (433), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 104/270 (38%), Positives = 142/270 (52%), Gaps = 23/270 (8%)

Query: 14  QDERSNINTLFVSGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRANQVVAFATFFNHQSA 73
           Q     + TLFV+GLP+DVK REI+NLFR  P ++S  L+    ++Q  AFA F + QSA
Sbjct: 37  QSSTHEVRTLFVAGLPEDVKPREIYNLFREFPDYESSHLRSPSNSSQPFAFAVFASQQSA 96

Query: 74  MAALHALNGVKFDPQTGSVLHIELARSNSRRKRKPGGGAYVVIDKRSKGETNVQXXXXXX 133
           + A HALNG+ FD + GS+L+I+LA+SNSR KR          DK+++G T         
Sbjct: 97  IMAKHALNGLVFDLEKGSILYIDLAKSNSRSKRTRIDDERAGADKKARGLTPSWATPDSA 156

Query: 134 ---------------XXXXXXXXXXXXXNHGDLATTQSGETAVGSDSAVPLGSEQHEKGG 178
                                        + D +T   G  A    S+ P   +      
Sbjct: 157 GVGSIHMPGMGNPAFNTNMFGYPSAQSLGNADGSTMSGGLFANLKKSSTPYVPQ------ 210

Query: 179 GDGGPCSTLFIANLGPNCTEDELKQALSVYTGFNMVKMRSRGGMPVAFADFEEIDQATKV 238
            +  PC+TLF+ANLG +C E EL Q  S Y GF  +KM+S  G PVAF DF+++  +T  
Sbjct: 211 -NSTPCATLFVANLGSSCNEQELIQVFSRYPGFLKLKMQSTYGAPVAFVDFQDVGSSTDA 269

Query: 239 LEELQGSSLPSSDRG-GMHIEYARSKMRKR 267
           L  LQG+ L SS  G GM +EYA+S+M  R
Sbjct: 270 LNSLQGTILHSSQSGEGMRVEYAKSRMGMR 299


>Glyma08g23850.1 
          Length = 355

 Score =  113 bits (283), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 78/244 (31%), Positives = 113/244 (46%), Gaps = 15/244 (6%)

Query: 20  INTLFVSGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRANQVVAFATFFNHQSAMAALHA 79
           + T+F++GLP+DVK RE+ NL R  PGF++ QL +  +A + + FA F     A+ A   
Sbjct: 39  VRTIFITGLPEDVKERELQNLLRWLPGFEASQLNF--KAEKPMGFALFSAPHQALTAKDI 96

Query: 80  LNGVKFDPQTGSVLHIELARSNSRRKRKPG--GGAY-------VVIDKRSKGETNVQXXX 130
           L  + FDP T SVLH E+A+ N   KR  G   GA+          D    G T+     
Sbjct: 97  LQDMLFDPDTKSVLHTEMAKKNLFVKRGIGADAGAFDQSKRLRTAGDYTHTGYTSPSPFH 156

Query: 131 XXXXXXXXXXXXXXXXNHGDLATTQSGETA-VGSDSAVPLGSEQHE---KGGGDGGPCST 186
                                        A V   +  P+ +       +   D  PC+T
Sbjct: 157 PPPPPVWGPHGYMAPPPPPPYDPYAGYPVAPVPMPTPAPIAAPSTYVPVQNTKDNPPCNT 216

Query: 187 LFIANLGPNCTEDELKQALSVYTGFNMVKMRSRGGMPVAFADFEEIDQATKVLEELQGSS 246
           LFI NLG N  E+E++   SV  GF  +K+  +    V F +FE+++ AT V   LQG+ 
Sbjct: 217 LFIGNLGENINEEEVRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNSATNVHHNLQGAV 276

Query: 247 LPSS 250
           +PSS
Sbjct: 277 IPSS 280


>Glyma11g05690.1 
          Length = 142

 Score = 95.1 bits (235), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 46/86 (53%), Positives = 59/86 (68%), Gaps = 1/86 (1%)

Query: 183 PCSTLFIANLGPNCTEDELKQALSVYTGFNMVKMRSRGGMPVAFADFEEIDQATKVLEEL 242
           PC+TLF+ANLGP+C E EL Q  S Y GF  +KM+S  G PVAF DF+++  +T  L  L
Sbjct: 52  PCATLFVANLGPSCNEQELIQVFSRYPGFLKLKMQSTYGAPVAFVDFQDVGSSTDALNSL 111

Query: 243 QGSSLPSSDRG-GMHIEYARSKMRKR 267
           QG+ L SS  G GM +EYA+S+M  R
Sbjct: 112 QGTILHSSQSGEGMRLEYAKSRMGMR 137


>Glyma11g05690.2 
          Length = 117

 Score = 94.7 bits (234), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 46/86 (53%), Positives = 59/86 (68%), Gaps = 1/86 (1%)

Query: 183 PCSTLFIANLGPNCTEDELKQALSVYTGFNMVKMRSRGGMPVAFADFEEIDQATKVLEEL 242
           PC+TLF+ANLGP+C E EL Q  S Y GF  +KM+S  G PVAF DF+++  +T  L  L
Sbjct: 27  PCATLFVANLGPSCNEQELIQVFSRYPGFLKLKMQSTYGAPVAFVDFQDVGSSTDALNSL 86

Query: 243 QGSSLPSSDRG-GMHIEYARSKMRKR 267
           QG+ L SS  G GM +EYA+S+M  R
Sbjct: 87  QGTILHSSQSGEGMRLEYAKSRMGMR 112


>Glyma07g00560.2 
          Length = 324

 Score = 79.0 bits (193), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 39/87 (44%), Positives = 55/87 (63%), Gaps = 2/87 (2%)

Query: 20  INTLFVSGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRANQVVAFATFFNHQSAMAALHA 79
           + T+F++GLP+DVK RE+ NL R  PGF++ QL +  +A + + FA F     A+AA   
Sbjct: 38  VRTIFITGLPEDVKERELQNLLRWLPGFEASQLNF--KAEKPMGFALFSAPHQALAAKDI 95

Query: 80  LNGVKFDPQTGSVLHIELARSNSRRKR 106
           L  + FDP T SVLH E+A+ N   KR
Sbjct: 96  LQDMLFDPDTKSVLHTEMAKKNLFVKR 122



 Score = 65.1 bits (157), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 31/71 (43%), Positives = 44/71 (61%)

Query: 180 DGGPCSTLFIANLGPNCTEDELKQALSVYTGFNMVKMRSRGGMPVAFADFEEIDQATKVL 239
           D  PC+TLFI NLG N  E+E++   SV  GF  +K+  +    V F +FE+++ AT V 
Sbjct: 212 DNPPCNTLFIGNLGENINEEEVRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNSATNVH 271

Query: 240 EELQGSSLPSS 250
             LQG+ +PSS
Sbjct: 272 HNLQGAVIPSS 282


>Glyma07g00560.1 
          Length = 328

 Score = 79.0 bits (193), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 39/87 (44%), Positives = 55/87 (63%), Gaps = 2/87 (2%)

Query: 20  INTLFVSGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRANQVVAFATFFNHQSAMAALHA 79
           + T+F++GLP+DVK RE+ NL R  PGF++ QL +  +A + + FA F     A+AA   
Sbjct: 38  VRTIFITGLPEDVKERELQNLLRWLPGFEASQLNF--KAEKPMGFALFSAPHQALAAKDI 95

Query: 80  LNGVKFDPQTGSVLHIELARSNSRRKR 106
           L  + FDP T SVLH E+A+ N   KR
Sbjct: 96  LQDMLFDPDTKSVLHTEMAKKNLFVKR 122



 Score = 65.1 bits (157), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 31/71 (43%), Positives = 44/71 (61%)

Query: 180 DGGPCSTLFIANLGPNCTEDELKQALSVYTGFNMVKMRSRGGMPVAFADFEEIDQATKVL 239
           D  PC+TLFI NLG N  E+E++   SV  GF  +K+  +    V F +FE+++ AT V 
Sbjct: 216 DNPPCNTLFIGNLGENINEEEVRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNSATNVH 275

Query: 240 EELQGSSLPSS 250
             LQG+ +PSS
Sbjct: 276 HNLQGAVIPSS 286