Miyakogusa Predicted Gene

Lj3g3v2693120.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2693120.1 Non Chatacterized Hit- tr|C5XNT4|C5XNT4_SORBI
Putative uncharacterized protein Sb03g025940 OS=Sorghu,38.93,1e-17,
,CUFF.44434.1
         (173 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g20680.1                                                       218   2e-57
Glyma07g01270.2                                                       211   3e-55
Glyma07g01270.1                                                       211   3e-55
Glyma08g20680.2                                                       186   7e-48
Glyma07g01270.4                                                       175   2e-44
Glyma07g01270.3                                                       162   2e-40
Glyma07g11870.1                                                       126   1e-29
Glyma13g00210.1                                                        71   5e-13
Glyma17g06300.1                                                        65   5e-11

>Glyma08g20680.1 
          Length = 171

 Score =  218 bits (556), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 117/172 (68%), Positives = 130/172 (75%), Gaps = 5/172 (2%)

Query: 5   GDQGAPKLYNHKPRKAQLKQSKGQHK---FSSPPGMGTQTTAXXXXXXXKESFARRYKYL 61
            ++G PKLY +KP KAQLKQ +GQ K   FSSP  M T   A       KE F RRYK++
Sbjct: 2   SEEGPPKLYTNKPGKAQLKQFRGQQKSNGFSSPAAMDTHAAAPPPPP--KEPFIRRYKFV 59

Query: 62  WPMLLAVNLGVGAYLFVRTKKKDIGEEEQDASPVPVKETVAHVAETRVSPAPIASPVIER 121
           WP+LLAVNLGVGAYLF+ TKKKD GEEEQDA+PV  K+   HV ET VS   I +PVI R
Sbjct: 60  WPVLLAVNLGVGAYLFMGTKKKDTGEEEQDATPVSTKDATPHVVETPVSSPSITNPVINR 119

Query: 122 EPIPVDQQRELFKWILEEKRKVKPKDAEEKRKIDEEKALLKNLIRSKSIPSI 173
           EPIP +QQREL KWILEEKRKVK KDAEEKRKIDEEKALLK LIRSKSIPS+
Sbjct: 120 EPIPENQQRELLKWILEEKRKVKAKDAEEKRKIDEEKALLKKLIRSKSIPSV 171


>Glyma07g01270.2 
          Length = 174

 Score =  211 bits (537), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 112/173 (64%), Positives = 126/173 (72%), Gaps = 4/173 (2%)

Query: 5   GDQGAPKLYNHKPRKAQLKQSKGQHK---FSSPPGMGTQT-TAXXXXXXXKESFARRYKY 60
            ++G PKLY  KPRKA+LKQ +GQ K   FSSP  MGT   T        KE F RRYK+
Sbjct: 2   SEEGPPKLYTDKPRKARLKQFRGQQKSNAFSSPAAMGTHAATPPPPPPPPKEPFIRRYKF 61

Query: 61  LWPMLLAVNLGVGAYLFVRTKKKDIGEEEQDASPVPVKETVAHVAETRVSPAPIASPVIE 120
           +WPMLLAVNLGV AYLF RTKKK  GEEEQD + V  K+   HV E  V P  I +P+I+
Sbjct: 62  VWPMLLAVNLGVAAYLFTRTKKKGTGEEEQDVTRVSTKDATPHVVEMPVPPPSITNPMIK 121

Query: 121 REPIPVDQQRELFKWILEEKRKVKPKDAEEKRKIDEEKALLKNLIRSKSIPSI 173
           REPIP ++Q EL KWILEEKRKVK KDAEEKRKIDEEKALLK LIRSKSIPS+
Sbjct: 122 REPIPENEQCELLKWILEEKRKVKAKDAEEKRKIDEEKALLKKLIRSKSIPSV 174


>Glyma07g01270.1 
          Length = 174

 Score =  211 bits (537), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 112/173 (64%), Positives = 126/173 (72%), Gaps = 4/173 (2%)

Query: 5   GDQGAPKLYNHKPRKAQLKQSKGQHK---FSSPPGMGTQT-TAXXXXXXXKESFARRYKY 60
            ++G PKLY  KPRKA+LKQ +GQ K   FSSP  MGT   T        KE F RRYK+
Sbjct: 2   SEEGPPKLYTDKPRKARLKQFRGQQKSNAFSSPAAMGTHAATPPPPPPPPKEPFIRRYKF 61

Query: 61  LWPMLLAVNLGVGAYLFVRTKKKDIGEEEQDASPVPVKETVAHVAETRVSPAPIASPVIE 120
           +WPMLLAVNLGV AYLF RTKKK  GEEEQD + V  K+   HV E  V P  I +P+I+
Sbjct: 62  VWPMLLAVNLGVAAYLFTRTKKKGTGEEEQDVTRVSTKDATPHVVEMPVPPPSITNPMIK 121

Query: 121 REPIPVDQQRELFKWILEEKRKVKPKDAEEKRKIDEEKALLKNLIRSKSIPSI 173
           REPIP ++Q EL KWILEEKRKVK KDAEEKRKIDEEKALLK LIRSKSIPS+
Sbjct: 122 REPIPENEQCELLKWILEEKRKVKAKDAEEKRKIDEEKALLKKLIRSKSIPSV 174


>Glyma08g20680.2 
          Length = 135

 Score =  186 bits (473), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 94/123 (76%), Positives = 103/123 (83%)

Query: 51  KESFARRYKYLWPMLLAVNLGVGAYLFVRTKKKDIGEEEQDASPVPVKETVAHVAETRVS 110
           KE F RRYK++WP+LLAVNLGVGAYLF+ TKKKD GEEEQDA+PV  K+   HV ET VS
Sbjct: 13  KEPFIRRYKFVWPVLLAVNLGVGAYLFMGTKKKDTGEEEQDATPVSTKDATPHVVETPVS 72

Query: 111 PAPIASPVIEREPIPVDQQRELFKWILEEKRKVKPKDAEEKRKIDEEKALLKNLIRSKSI 170
              I +PVI REPIP +QQREL KWILEEKRKVK KDAEEKRKIDEEKALLK LIRSKSI
Sbjct: 73  SPSITNPVINREPIPENQQRELLKWILEEKRKVKAKDAEEKRKIDEEKALLKKLIRSKSI 132

Query: 171 PSI 173
           PS+
Sbjct: 133 PSV 135


>Glyma07g01270.4 
          Length = 138

 Score =  175 bits (444), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 92/138 (66%), Positives = 102/138 (73%), Gaps = 1/138 (0%)

Query: 37  MGTQT-TAXXXXXXXKESFARRYKYLWPMLLAVNLGVGAYLFVRTKKKDIGEEEQDASPV 95
           MGT   T        KE F RRYK++WPMLLAVNLGV AYLF RTKKK  GEEEQD + V
Sbjct: 1   MGTHAATPPPPPPPPKEPFIRRYKFVWPMLLAVNLGVAAYLFTRTKKKGTGEEEQDVTRV 60

Query: 96  PVKETVAHVAETRVSPAPIASPVIEREPIPVDQQRELFKWILEEKRKVKPKDAEEKRKID 155
             K+   HV E  V P  I +P+I+REPIP ++Q EL KWILEEKRKVK KDAEEKRKID
Sbjct: 61  STKDATPHVVEMPVPPPSITNPMIKREPIPENEQCELLKWILEEKRKVKAKDAEEKRKID 120

Query: 156 EEKALLKNLIRSKSIPSI 173
           EEKALLK LIRSKSIPS+
Sbjct: 121 EEKALLKKLIRSKSIPSV 138


>Glyma07g01270.3 
          Length = 170

 Score =  162 bits (409), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 84/143 (58%), Positives = 98/143 (68%), Gaps = 4/143 (2%)

Query: 5   GDQGAPKLYNHKPRKAQLKQSKGQHK---FSSPPGMGTQT-TAXXXXXXXKESFARRYKY 60
            ++G PKLY  KPRKA+LKQ +GQ K   FSSP  MGT   T        KE F RRYK+
Sbjct: 2   SEEGPPKLYTDKPRKARLKQFRGQQKSNAFSSPAAMGTHAATPPPPPPPPKEPFIRRYKF 61

Query: 61  LWPMLLAVNLGVGAYLFVRTKKKDIGEEEQDASPVPVKETVAHVAETRVSPAPIASPVIE 120
           +WPMLLAVNLGV AYLF RTKKK  GEEEQD + V  K+   HV E  V P  I +P+I+
Sbjct: 62  VWPMLLAVNLGVAAYLFTRTKKKGTGEEEQDVTRVSTKDATPHVVEMPVPPPSITNPMIK 121

Query: 121 REPIPVDQQRELFKWILEEKRKV 143
           REPIP ++Q EL KWILEEKRK+
Sbjct: 122 REPIPENEQCELLKWILEEKRKL 144


>Glyma07g11870.1 
          Length = 96

 Score =  126 bits (316), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 67/96 (69%), Positives = 76/96 (79%)

Query: 78  VRTKKKDIGEEEQDASPVPVKETVAHVAETRVSPAPIASPVIEREPIPVDQQRELFKWIL 137
           +RTKKKD GEEEQD + V  K+   HV E  V P  I +P+I+REPIP ++Q EL KWIL
Sbjct: 1   MRTKKKDTGEEEQDVTRVSTKDATPHVVEMPVPPPSITNPMIKREPIPENEQCELLKWIL 60

Query: 138 EEKRKVKPKDAEEKRKIDEEKALLKNLIRSKSIPSI 173
           EEKRKVK KDAEEKRKIDEEKALLK LIRSKSIPS+
Sbjct: 61  EEKRKVKAKDAEEKRKIDEEKALLKKLIRSKSIPSV 96


>Glyma13g00210.1 
          Length = 199

 Score = 71.2 bits (173), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 33/60 (55%), Positives = 50/60 (83%), Gaps = 1/60 (1%)

Query: 112 APIASPVIEREPIPVDQQRELFKWILEEKRKVKPKDAEEKRKIDEEKALLKNLIRSKSIP 171
            P+ +PV  + PIP ++Q E+F+W+LEEKRK+KPK+  EK++IDE+KA+LK+ +R+KSIP
Sbjct: 139 VPVTTPVKVQAPIP-EEQCEIFQWMLEEKRKLKPKNPLEKKQIDEDKAILKHFLRAKSIP 197


>Glyma17g06300.1 
          Length = 131

 Score = 64.7 bits (156), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 44/130 (33%), Positives = 66/130 (50%), Gaps = 15/130 (11%)

Query: 36  GMGTQTTAXXXXXXXKESFARRYKYLWPMLLAVNLGVGAYLFVRTKKKDI---------- 85
           GMG                 +R K++W +LL  NL +GAYLF   K +D           
Sbjct: 2   GMGETPPHQPAPVPPTGLLMKRCKFIWRLLLLSNLALGAYLFASAKPRDSMEINRRTAQK 61

Query: 86  ---GEEEQDASPVPVKETVAHVAETRVSPAPIASPVIEREPIPVDQQRELFKWILEEKRK 142
              G+   + SP P   ++    +  +   P+ +PV  + PIP +QQRE+F+W+LEEKRK
Sbjct: 62  SHKGKASVEVSPEPTTSSIDFNYDDFL--VPVTTPVKVQAPIPEEQQREIFQWMLEEKRK 119

Query: 143 VKPKDAEEKR 152
           +KPK+  EK+
Sbjct: 120 LKPKNPVEKK 129