Miyakogusa Predicted Gene

Lj3g3v2692910.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2692910.1 Non Chatacterized Hit- tr|D7KDV4|D7KDV4_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,35.41,4e-17,seg,NULL; coiled-coil,NULL,CUFF.44390.1
         (191 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g01150.1                                                       173   8e-44
Glyma08g20540.3                                                       167   5e-42
Glyma08g20540.2                                                       167   5e-42
Glyma08g20540.1                                                       167   5e-42

>Glyma07g01150.1 
          Length = 195

 Score =  173 bits (439), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 85/96 (88%), Positives = 92/96 (95%)

Query: 96  SLASHYQLLHLVENLAEVVDHGTPDQQSEALITELTNRFEKCQQLLNSISGSISTKAMTV 155
           SLASHY LLHLVENLAEV++HGTPDQQS+ALI EL+N FEKCQQLLNSIS SISTKAMTV
Sbjct: 100 SLASHYHLLHLVENLAEVIEHGTPDQQSDALINELSNHFEKCQQLLNSISDSISTKAMTV 159

Query: 156 EGQKKKLEESEQLLNQRRDLIADYKKSVEELVRSEP 191
           EGQKKKLEESEQLLNQRRDLIA+Y+KSVE+LVRSEP
Sbjct: 160 EGQKKKLEESEQLLNQRRDLIANYRKSVEDLVRSEP 195


>Glyma08g20540.3 
          Length = 178

 Score =  167 bits (424), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 82/96 (85%), Positives = 89/96 (92%)

Query: 96  SLASHYQLLHLVENLAEVVDHGTPDQQSEALITELTNRFEKCQQLLNSISGSISTKAMTV 155
           SLASHY LLHLVENLAEV++HGTPDQ S+ALI E +N FEKC QLLNSISGSISTKAMTV
Sbjct: 77  SLASHYHLLHLVENLAEVIEHGTPDQPSDALINESSNHFEKCLQLLNSISGSISTKAMTV 136

Query: 156 EGQKKKLEESEQLLNQRRDLIADYKKSVEELVRSEP 191
           EGQKKKLEESEQLLNQRRDLI +Y+KSVE+LVRSEP
Sbjct: 137 EGQKKKLEESEQLLNQRRDLIGNYRKSVEDLVRSEP 172


>Glyma08g20540.2 
          Length = 178

 Score =  167 bits (424), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 82/96 (85%), Positives = 89/96 (92%)

Query: 96  SLASHYQLLHLVENLAEVVDHGTPDQQSEALITELTNRFEKCQQLLNSISGSISTKAMTV 155
           SLASHY LLHLVENLAEV++HGTPDQ S+ALI E +N FEKC QLLNSISGSISTKAMTV
Sbjct: 77  SLASHYHLLHLVENLAEVIEHGTPDQPSDALINESSNHFEKCLQLLNSISGSISTKAMTV 136

Query: 156 EGQKKKLEESEQLLNQRRDLIADYKKSVEELVRSEP 191
           EGQKKKLEESEQLLNQRRDLI +Y+KSVE+LVRSEP
Sbjct: 137 EGQKKKLEESEQLLNQRRDLIGNYRKSVEDLVRSEP 172


>Glyma08g20540.1 
          Length = 178

 Score =  167 bits (424), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 82/96 (85%), Positives = 89/96 (92%)

Query: 96  SLASHYQLLHLVENLAEVVDHGTPDQQSEALITELTNRFEKCQQLLNSISGSISTKAMTV 155
           SLASHY LLHLVENLAEV++HGTPDQ S+ALI E +N FEKC QLLNSISGSISTKAMTV
Sbjct: 77  SLASHYHLLHLVENLAEVIEHGTPDQPSDALINESSNHFEKCLQLLNSISGSISTKAMTV 136

Query: 156 EGQKKKLEESEQLLNQRRDLIADYKKSVEELVRSEP 191
           EGQKKKLEESEQLLNQRRDLI +Y+KSVE+LVRSEP
Sbjct: 137 EGQKKKLEESEQLLNQRRDLIGNYRKSVEDLVRSEP 172