Miyakogusa Predicted Gene
- Lj3g3v2666480.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v2666480.1 tr|Q9MAZ9|Q9MAZ9_SOYBN Nonclathrin coat protein
zeta1-COP OS=Glycine max GN=copz1 PE=2 SV=1,95,0,no description,NULL;
Clat_adaptor_s,AP complex, mu/sigma subunit; seg,NULL; SUBFAMILY NOT
NAMED,NULL,CUFF.44554.1
(180 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma08g20370.1 323 8e-89
Glyma07g01000.2 323 8e-89
Glyma13g42470.1 308 2e-84
Glyma08g20370.3 289 1e-78
Glyma07g01000.1 285 2e-77
Glyma15g13190.1 249 1e-66
Glyma09g02270.3 247 5e-66
Glyma09g02270.1 247 5e-66
Glyma15g13190.3 243 9e-65
Glyma08g20370.2 213 1e-55
Glyma15g13190.2 186 9e-48
Glyma09g02270.2 184 5e-47
Glyma15g02910.1 175 3e-44
Glyma03g04070.1 77 9e-15
Glyma03g04170.1 75 3e-14
>Glyma08g20370.1
Length = 180
Score = 323 bits (827), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 159/180 (88%), Positives = 164/180 (91%)
Query: 1 MASNGQCPSIKNILLLDSEGKRVAVKYYSDDWPTNNSKLAFEKFVFSKTLKTNARTEAEV 60
MAS G CPSIKNILLLDSEGKRVAVKYYSDDWPTNN+KLAFEKFVF+KT+KTNARTEAEV
Sbjct: 1 MASQGLCPSIKNILLLDSEGKRVAVKYYSDDWPTNNAKLAFEKFVFTKTVKTNARTEAEV 60
Query: 61 TLLENNIIIYKFVQDLHFFVTGGDDENELILASVLQGFFDAVTLLLRSNVDKREAXXXXX 120
TLLENNIIIYKFVQDLHFFVTGG+DENELILASVLQGFFDAVTLLLRSNVDKREA
Sbjct: 61 TLLENNIIIYKFVQDLHFFVTGGEDENELILASVLQGFFDAVTLLLRSNVDKREALENLD 120
Query: 121 XXXXXXXXXVDGGIILETNGPLIAEKVTSHSLDADAPLSEQTLTQAWATAREHLTRTLLK 180
VDGG+ILETNGPLIAEKVTSHSLDADAPLSEQTLTQAWATAREHLTRTLLK
Sbjct: 121 LILLCLDEIVDGGMILETNGPLIAEKVTSHSLDADAPLSEQTLTQAWATAREHLTRTLLK 180
>Glyma07g01000.2
Length = 180
Score = 323 bits (827), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 159/180 (88%), Positives = 164/180 (91%)
Query: 1 MASNGQCPSIKNILLLDSEGKRVAVKYYSDDWPTNNSKLAFEKFVFSKTLKTNARTEAEV 60
MAS G CPSIKNILLLDSEGKRVAVKYYSDDWPTNN+KLAFEKFVF+KT+KTNARTEAEV
Sbjct: 1 MASQGLCPSIKNILLLDSEGKRVAVKYYSDDWPTNNAKLAFEKFVFTKTVKTNARTEAEV 60
Query: 61 TLLENNIIIYKFVQDLHFFVTGGDDENELILASVLQGFFDAVTLLLRSNVDKREAXXXXX 120
TLLENNIIIYKFVQDLHFFVTGG+DENELILASVLQGFFDAVTLLLRSNVDKREA
Sbjct: 61 TLLENNIIIYKFVQDLHFFVTGGEDENELILASVLQGFFDAVTLLLRSNVDKREALENLD 120
Query: 121 XXXXXXXXXVDGGIILETNGPLIAEKVTSHSLDADAPLSEQTLTQAWATAREHLTRTLLK 180
VDGG+ILETNGPLIAEKVTSHSLDADAPLSEQTLTQAWATAREHLTRTLLK
Sbjct: 121 LILLCLDEIVDGGMILETNGPLIAEKVTSHSLDADAPLSEQTLTQAWATAREHLTRTLLK 180
>Glyma13g42470.1
Length = 181
Score = 308 bits (789), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 151/181 (83%), Positives = 163/181 (90%), Gaps = 1/181 (0%)
Query: 1 MASNGQCPSIKNILLLDSEGKRVAVKYYSDDWPTNNSKLAFEKFVFSKTLKTNARTEAEV 60
MAS G CPSIKNILLLDSEGKRVAVKY+SDDWPTNNSK+AFEKFVFSKT+KTNARTEAE+
Sbjct: 1 MASYGSCPSIKNILLLDSEGKRVAVKYFSDDWPTNNSKIAFEKFVFSKTVKTNARTEAEI 60
Query: 61 TLLENNIIIYKFVQDLHFFVTGGDDENELILASVLQGFFDAVTLLLRSNVDKREAXXXXX 120
TLL+NNIIIYKFVQDLHFFVTGGDD NE+ILASVLQGFFDA+TLLLR+NVDKREA
Sbjct: 61 TLLDNNIIIYKFVQDLHFFVTGGDDANEIILASVLQGFFDAITLLLRNNVDKREALENLD 120
Query: 121 XXXXXXXXXVDGGIILETNGPLIAEKVTSHSLD-ADAPLSEQTLTQAWATAREHLTRTLL 179
VDGG+ILETNGPLIAEKVTSHS+D A++PLSEQTLTQAWATAREHLTRTLL
Sbjct: 121 LILLCLDEIVDGGMILETNGPLIAEKVTSHSMDGAESPLSEQTLTQAWATAREHLTRTLL 180
Query: 180 K 180
K
Sbjct: 181 K 181
>Glyma08g20370.3
Length = 171
Score = 289 bits (740), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 143/167 (85%), Positives = 151/167 (90%)
Query: 14 LLLDSEGKRVAVKYYSDDWPTNNSKLAFEKFVFSKTLKTNARTEAEVTLLENNIIIYKFV 73
L++ +GKRVAVKYYSDDWPTNN+KLAFEKFVF+KT+KTNARTEAEVTLLENNIIIYKFV
Sbjct: 5 LVIFVQGKRVAVKYYSDDWPTNNAKLAFEKFVFTKTVKTNARTEAEVTLLENNIIIYKFV 64
Query: 74 QDLHFFVTGGDDENELILASVLQGFFDAVTLLLRSNVDKREAXXXXXXXXXXXXXXVDGG 133
QDLHFFVTGG+DENELILASVLQGFFDAVTLLLRSNVDKREA VDGG
Sbjct: 65 QDLHFFVTGGEDENELILASVLQGFFDAVTLLLRSNVDKREALENLDLILLCLDEIVDGG 124
Query: 134 IILETNGPLIAEKVTSHSLDADAPLSEQTLTQAWATAREHLTRTLLK 180
+ILETNGPLIAEKVTSHSLDADAPLSEQTLTQAWATAREHLTRTLLK
Sbjct: 125 MILETNGPLIAEKVTSHSLDADAPLSEQTLTQAWATAREHLTRTLLK 171
>Glyma07g01000.1
Length = 188
Score = 285 bits (729), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 140/163 (85%), Positives = 146/163 (89%)
Query: 1 MASNGQCPSIKNILLLDSEGKRVAVKYYSDDWPTNNSKLAFEKFVFSKTLKTNARTEAEV 60
MAS G CPSIKNILLLDSEGKRVAVKYYSDDWPTNN+KLAFEKFVF+KT+KTNARTEAEV
Sbjct: 1 MASQGLCPSIKNILLLDSEGKRVAVKYYSDDWPTNNAKLAFEKFVFTKTVKTNARTEAEV 60
Query: 61 TLLENNIIIYKFVQDLHFFVTGGDDENELILASVLQGFFDAVTLLLRSNVDKREAXXXXX 120
TLLENNIIIYKFVQDLHFFVTGG+DENELILASVLQGFFDAVTLLLRSNVDKREA
Sbjct: 61 TLLENNIIIYKFVQDLHFFVTGGEDENELILASVLQGFFDAVTLLLRSNVDKREALENLD 120
Query: 121 XXXXXXXXXVDGGIILETNGPLIAEKVTSHSLDADAPLSEQTL 163
VDGG+ILETNGPLIAEKVTSHSLDADAPLSEQ +
Sbjct: 121 LILLCLDEIVDGGMILETNGPLIAEKVTSHSLDADAPLSEQVM 163
>Glyma15g13190.1
Length = 179
Score = 249 bits (636), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 122/178 (68%), Positives = 145/178 (81%)
Query: 3 SNGQCPSIKNILLLDSEGKRVAVKYYSDDWPTNNSKLAFEKFVFSKTLKTNARTEAEVTL 62
S+ CPS+KN+LLLDS+GKRVAVKY+S+DWPTN++K FEK VF+KT KTNARTEAE+ +
Sbjct: 2 SHETCPSVKNVLLLDSDGKRVAVKYFSEDWPTNSAKENFEKVVFNKTQKTNARTEAEIAM 61
Query: 63 LENNIIIYKFVQDLHFFVTGGDDENELILASVLQGFFDAVTLLLRSNVDKREAXXXXXXX 122
ENNI++YKFVQDLHFFVTGGD ENELILA+VLQ FFD+V LLLR NVDK+EA
Sbjct: 62 FENNIVLYKFVQDLHFFVTGGDYENELILATVLQAFFDSVGLLLRGNVDKKEALENLDLI 121
Query: 123 XXXXXXXVDGGIILETNGPLIAEKVTSHSLDADAPLSEQTLTQAWATAREHLTRTLLK 180
VDGGIILET+ +IA KV S+S+D+ APLSEQTL+QA ATAREHL R+LLK
Sbjct: 122 LLCIDEIVDGGIILETDPNVIAGKVASNSIDSGAPLSEQTLSQALATAREHLARSLLK 179
>Glyma09g02270.3
Length = 179
Score = 247 bits (630), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 121/178 (67%), Positives = 144/178 (80%)
Query: 3 SNGQCPSIKNILLLDSEGKRVAVKYYSDDWPTNNSKLAFEKFVFSKTLKTNARTEAEVTL 62
S+ CPS+KN+LLLDS+GKRVAVKY+S+DW TN++K FEK VF+KT KTNARTEAE+ +
Sbjct: 2 SHETCPSVKNVLLLDSDGKRVAVKYFSEDWATNSAKENFEKVVFNKTQKTNARTEAEIAM 61
Query: 63 LENNIIIYKFVQDLHFFVTGGDDENELILASVLQGFFDAVTLLLRSNVDKREAXXXXXXX 122
ENNI++YKFVQDLHFFVTGGD ENELILA+VLQ FFD+V LLLR NVDK+EA
Sbjct: 62 FENNIVVYKFVQDLHFFVTGGDYENELILATVLQAFFDSVGLLLRGNVDKKEALENLDLI 121
Query: 123 XXXXXXXVDGGIILETNGPLIAEKVTSHSLDADAPLSEQTLTQAWATAREHLTRTLLK 180
VDGGIILET+ +IA KV S+S+D+ APLSEQTL+QA ATAREHL R+LLK
Sbjct: 122 LLCIDEIVDGGIILETDPNVIAGKVASNSIDSGAPLSEQTLSQALATAREHLARSLLK 179
>Glyma09g02270.1
Length = 179
Score = 247 bits (630), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 121/178 (67%), Positives = 144/178 (80%)
Query: 3 SNGQCPSIKNILLLDSEGKRVAVKYYSDDWPTNNSKLAFEKFVFSKTLKTNARTEAEVTL 62
S+ CPS+KN+LLLDS+GKRVAVKY+S+DW TN++K FEK VF+KT KTNARTEAE+ +
Sbjct: 2 SHETCPSVKNVLLLDSDGKRVAVKYFSEDWATNSAKENFEKVVFNKTQKTNARTEAEIAM 61
Query: 63 LENNIIIYKFVQDLHFFVTGGDDENELILASVLQGFFDAVTLLLRSNVDKREAXXXXXXX 122
ENNI++YKFVQDLHFFVTGGD ENELILA+VLQ FFD+V LLLR NVDK+EA
Sbjct: 62 FENNIVVYKFVQDLHFFVTGGDYENELILATVLQAFFDSVGLLLRGNVDKKEALENLDLI 121
Query: 123 XXXXXXXVDGGIILETNGPLIAEKVTSHSLDADAPLSEQTLTQAWATAREHLTRTLLK 180
VDGGIILET+ +IA KV S+S+D+ APLSEQTL+QA ATAREHL R+LLK
Sbjct: 122 LLCIDEIVDGGIILETDPNVIAGKVASNSIDSGAPLSEQTLSQALATAREHLARSLLK 179
>Glyma15g13190.3
Length = 178
Score = 243 bits (619), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 121/178 (67%), Positives = 144/178 (80%), Gaps = 1/178 (0%)
Query: 3 SNGQCPSIKNILLLDSEGKRVAVKYYSDDWPTNNSKLAFEKFVFSKTLKTNARTEAEVTL 62
S+ CPS+KN+LLLDS+GKRVAVKY+S+DWPTN++K FEK VF+KT KTNARTE E+ +
Sbjct: 2 SHETCPSVKNVLLLDSDGKRVAVKYFSEDWPTNSAKENFEKVVFNKTQKTNARTE-EIAM 60
Query: 63 LENNIIIYKFVQDLHFFVTGGDDENELILASVLQGFFDAVTLLLRSNVDKREAXXXXXXX 122
ENNI++YKFVQDLHFFVTGGD ENELILA+VLQ FFD+V LLLR NVDK+EA
Sbjct: 61 FENNIVLYKFVQDLHFFVTGGDYENELILATVLQAFFDSVGLLLRGNVDKKEALENLDLI 120
Query: 123 XXXXXXXVDGGIILETNGPLIAEKVTSHSLDADAPLSEQTLTQAWATAREHLTRTLLK 180
VDGGIILET+ +IA KV S+S+D+ APLSEQTL+QA ATAREHL R+LLK
Sbjct: 121 LLCIDEIVDGGIILETDPNVIAGKVASNSIDSGAPLSEQTLSQALATAREHLARSLLK 178
>Glyma08g20370.2
Length = 140
Score = 213 bits (541), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 107/123 (86%), Positives = 109/123 (88%)
Query: 58 AEVTLLENNIIIYKFVQDLHFFVTGGDDENELILASVLQGFFDAVTLLLRSNVDKREAXX 117
AEVTLLENNIIIYKFVQDLHFFVTGG+DENELILASVLQGFFDAVTLLLRSNVDKREA
Sbjct: 18 AEVTLLENNIIIYKFVQDLHFFVTGGEDENELILASVLQGFFDAVTLLLRSNVDKREALE 77
Query: 118 XXXXXXXXXXXXVDGGIILETNGPLIAEKVTSHSLDADAPLSEQTLTQAWATAREHLTRT 177
VDGG+ILETNGPLIAEKVTSHSLDADAPLSEQTLTQAWATAREHLTRT
Sbjct: 78 NLDLILLCLDEIVDGGMILETNGPLIAEKVTSHSLDADAPLSEQTLTQAWATAREHLTRT 137
Query: 178 LLK 180
LLK
Sbjct: 138 LLK 140
>Glyma15g13190.2
Length = 152
Score = 186 bits (473), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 89/131 (67%), Positives = 105/131 (80%)
Query: 3 SNGQCPSIKNILLLDSEGKRVAVKYYSDDWPTNNSKLAFEKFVFSKTLKTNARTEAEVTL 62
S+ CPS+KN+LLLDS+GKRVAVKY+S+DWPTN++K FEK VF+KT KTNARTEAE+ +
Sbjct: 2 SHETCPSVKNVLLLDSDGKRVAVKYFSEDWPTNSAKENFEKVVFNKTQKTNARTEAEIAM 61
Query: 63 LENNIIIYKFVQDLHFFVTGGDDENELILASVLQGFFDAVTLLLRSNVDKREAXXXXXXX 122
ENNI++YKFVQDLHFFVTGGD ENELILA+VLQ FFD+V LLLR NVDK+EA
Sbjct: 62 FENNIVLYKFVQDLHFFVTGGDYENELILATVLQAFFDSVGLLLRGNVDKKEALENLDLI 121
Query: 123 XXXXXXXVDGG 133
VDGG
Sbjct: 122 LLCIDEIVDGG 132
>Glyma09g02270.2
Length = 144
Score = 184 bits (466), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 88/131 (67%), Positives = 104/131 (79%)
Query: 3 SNGQCPSIKNILLLDSEGKRVAVKYYSDDWPTNNSKLAFEKFVFSKTLKTNARTEAEVTL 62
S+ CPS+KN+LLLDS+GKRVAVKY+S+DW TN++K FEK VF+KT KTNARTEAE+ +
Sbjct: 2 SHETCPSVKNVLLLDSDGKRVAVKYFSEDWATNSAKENFEKVVFNKTQKTNARTEAEIAM 61
Query: 63 LENNIIIYKFVQDLHFFVTGGDDENELILASVLQGFFDAVTLLLRSNVDKREAXXXXXXX 122
ENNI++YKFVQDLHFFVTGGD ENELILA+VLQ FFD+V LLLR NVDK+EA
Sbjct: 62 FENNIVVYKFVQDLHFFVTGGDYENELILATVLQAFFDSVGLLLRGNVDKKEALENLDLI 121
Query: 123 XXXXXXXVDGG 133
VDGG
Sbjct: 122 LLCIDEIVDGG 132
>Glyma15g02910.1
Length = 194
Score = 175 bits (443), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 100/184 (54%), Positives = 115/184 (62%), Gaps = 34/184 (18%)
Query: 19 EGKRVAVKYYSDDWPTNNSKLAFEKFVFSKTLKTNARTEAEVTLLENNIIIYKFVQDLHF 78
EGKRV VK +SDDWPTN+SK+AFEKFVF+ E+TLL+NNII+YKFVQDLHF
Sbjct: 10 EGKRVPVKDFSDDWPTNSSKIAFEKFVFT-----------EITLLDNNIIVYKFVQDLHF 58
Query: 79 FVTGGDDENELILA-SVLQGFFDAVTLLLRSNVDKREAXXXXXXXXXX---------XXX 128
FVTGGDD NE+ILA L+ F + L R +
Sbjct: 59 FVTGGDDANEIILAFQFLRVEFCYLDLKFRCTFPHHASSATHIIFLEALENLDLILLCLD 118
Query: 129 XVDGGIILETNGPLIAEKVTSHSLDADAPLSEQ-------------TLTQAWATAREHLT 175
+ GG+ILETNGPLIAEK TSHS+DAD+PLSEQ TLTQAWATAREHLT
Sbjct: 119 EIVGGMILETNGPLIAEKATSHSMDADSPLSEQEMQHSFCFVSFTNTLTQAWATAREHLT 178
Query: 176 RTLL 179
RTLL
Sbjct: 179 RTLL 182
>Glyma03g04070.1
Length = 93
Score = 77.0 bits (188), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 38/63 (60%), Positives = 44/63 (69%), Gaps = 4/63 (6%)
Query: 21 KRVAVKYYSDDWPTNNSKLAFEKFVFSKTLKTNARTEAEVTLLENNIIIYKFVQDLHFFV 80
KRVAVKYYSDDWPTNN+KLAFEKFVF+KT+KTNAR N+ I +V D +
Sbjct: 1 KRVAVKYYSDDWPTNNAKLAFEKFVFTKTVKTNARRRGGCF----NLTIIFYVTDFCLMI 56
Query: 81 TGG 83
T G
Sbjct: 57 TLG 59
>Glyma03g04170.1
Length = 109
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/63 (60%), Positives = 44/63 (69%), Gaps = 4/63 (6%)
Query: 21 KRVAVKYYSDDWPTNNSKLAFEKFVFSKTLKTNARTEAEVTLLENNIIIYKFVQDLHFFV 80
KRVAVKYYSDDWPTNN+KLAFEKFVF+KT+KTNAR N+ I +V D +
Sbjct: 1 KRVAVKYYSDDWPTNNAKLAFEKFVFTKTVKTNARRRGGCF----NLTIIFYVTDFCLMI 56
Query: 81 TGG 83
T G
Sbjct: 57 TLG 59