Miyakogusa Predicted Gene

Lj3g3v2661980.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2661980.1 Non Chatacterized Hit- tr|I1LRC5|I1LRC5_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,68.75,3e-18,PPR_2,Pentatricopeptide repeat; PPR,Pentatricopeptide
repeat; SUBFAMILY NOT NAMED,NULL; FAMILY NOT N,gene.g49371.t1.1
         (92 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g19440.1                                                       100   4e-22
Glyma12g09040.1                                                        96   9e-21
Glyma12g05220.1                                                        55   2e-08
Glyma08g36160.1                                                        53   6e-08
Glyma04g09640.1                                                        52   1e-07
Glyma06g09740.1                                                        51   2e-07
Glyma11g00960.1                                                        50   6e-07
Glyma02g41060.1                                                        50   6e-07
Glyma0679s00210.1                                                      50   7e-07
Glyma20g01300.1                                                        49   9e-07
Glyma15g41920.1                                                        49   1e-06
Glyma08g26050.1                                                        49   1e-06
Glyma09g33280.1                                                        49   1e-06
Glyma06g21110.1                                                        49   1e-06
Glyma20g18010.1                                                        48   2e-06
Glyma17g05680.1                                                        47   3e-06
Glyma03g34810.1                                                        47   4e-06
Glyma14g24760.1                                                        47   5e-06

>Glyma11g19440.1 
          Length = 423

 Score =  100 bits (249), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 46/64 (71%), Positives = 51/64 (79%)

Query: 16  SVGNFKLQIRGLCHSGDMERAVMFMGRMEEHGIRPGVQTYNVVIRYFCDAGEREKGLSMF 75
           +V  F + IRGLCH GDMERA+ FM RM EHG+R  VQTYNVVIRYFCDAGE EKGL +F
Sbjct: 310 NVVTFNVVIRGLCHVGDMERALGFMERMGEHGLRASVQTYNVVIRYFCDAGEIEKGLEVF 369

Query: 76  EKMG 79
            KMG
Sbjct: 370 GKMG 373


>Glyma12g09040.1 
          Length = 467

 Score = 95.9 bits (237), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 44/64 (68%), Positives = 50/64 (78%)

Query: 16  SVGNFKLQIRGLCHSGDMERAVMFMGRMEEHGIRPGVQTYNVVIRYFCDAGEREKGLSMF 75
           +V  + + IRGLCH GDMERA+ FM RM EHG+R  VQTYNVVIRYFCDAGE EK L +F
Sbjct: 320 NVVTYNVVIRGLCHVGDMERALGFMERMGEHGLRACVQTYNVVIRYFCDAGEVEKALEVF 379

Query: 76  EKMG 79
            KMG
Sbjct: 380 GKMG 383



 Score = 48.5 bits (114), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 1/65 (1%)

Query: 16  SVGNFKLQIRGLCHSGDMERAVMFMGRMEEHGI-RPGVQTYNVVIRYFCDAGEREKGLSM 74
           +V  +   I+ LC    +E AV+    M   G+  P V TYNVVIR  C  G+ E+ L  
Sbjct: 284 NVATYNALIQVLCKKDSVENAVVVFEEMAREGVCVPNVVTYNVVIRGLCHVGDMERALGF 343

Query: 75  FEKMG 79
            E+MG
Sbjct: 344 MERMG 348


>Glyma12g05220.1 
          Length = 545

 Score = 54.7 bits (130), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/68 (35%), Positives = 40/68 (58%)

Query: 11  LRLRSSVGNFKLQIRGLCHSGDMERAVMFMGRMEEHGIRPGVQTYNVVIRYFCDAGEREK 70
           + +RSS+  F + I  LC  G +++A  F+G ME  G++P V TYN +I   C  G+ ++
Sbjct: 163 MNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQR 222

Query: 71  GLSMFEKM 78
              +F+ M
Sbjct: 223 ARVIFQTM 230


>Glyma08g36160.1 
          Length = 627

 Score = 53.1 bits (126), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 22/59 (37%), Positives = 35/59 (59%)

Query: 20  FKLQIRGLCHSGDMERAVMFMGRMEEHGIRPGVQTYNVVIRYFCDAGEREKGLSMFEKM 78
           + + IR LC  GD+ R+V  + RM++ GI P   +YN +I+ FC   + EK   +F+ M
Sbjct: 486 YNILIRSLCTIGDVARSVKLLRRMQKEGISPDTYSYNALIQIFCRMNKVEKAKKLFDSM 544


>Glyma04g09640.1 
          Length = 604

 Score = 52.0 bits (123), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/57 (42%), Positives = 34/57 (59%)

Query: 24  IRGLCHSGDMERAVMFMGRMEEHGIRPGVQTYNVVIRYFCDAGEREKGLSMFEKMGM 80
           IRG C SG  ++A   M  +E  G  P V TYNV+I  +C +GE +K L + E+M +
Sbjct: 148 IRGFCRSGKTKKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALEVLERMSV 204


>Glyma06g09740.1 
          Length = 476

 Score = 51.2 bits (121), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/57 (42%), Positives = 33/57 (57%)

Query: 24 IRGLCHSGDMERAVMFMGRMEEHGIRPGVQTYNVVIRYFCDAGEREKGLSMFEKMGM 80
          IRG C SG   +A   M  +E  G  P V TYNV+I  +C +GE +K L + E+M +
Sbjct: 31 IRGFCRSGKTRKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALQVLERMSV 87


>Glyma11g00960.1 
          Length = 543

 Score = 50.1 bits (118), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 3/72 (4%)

Query: 24  IRGLCHSGDMERAVMFMGRMEEHGIRPGVQTYNVVIRYFCDAGEREKGLSMFEKM---GM 80
           I   CH  D  +    +  M E+G  P   TY  V+ +   AG+  K L ++EKM   G 
Sbjct: 305 IEAYCHERDFRKVDQVLEEMRENGCPPNAVTYTTVMLHLGKAGQLSKALEVYEKMKCDGC 364

Query: 81  VCACPIWTCIMF 92
           V   P+++C++F
Sbjct: 365 VADTPVYSCMIF 376


>Glyma02g41060.1 
          Length = 615

 Score = 50.1 bits (118), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 24/66 (36%), Positives = 36/66 (54%)

Query: 13  LRSSVGNFKLQIRGLCHSGDMERAVMFMGRMEEHGIRPGVQTYNVVIRYFCDAGEREKGL 72
           LR +V +F   I G C SGD+E      G ME  G+ P V T++ +I   C  G  ++G 
Sbjct: 279 LRPTVVSFNTLISGCCKSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGS 338

Query: 73  SMFEKM 78
            +F++M
Sbjct: 339 LLFDEM 344


>Glyma0679s00210.1 
          Length = 496

 Score = 49.7 bits (117), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 1/66 (1%)

Query: 24  IRGLCHSGDMERAVMFMGRMEEHGIRPGVQTYNVVIRYFCDAGEREKGLSMFEKMGMV-C 82
           I GLC +  +ERA+  +  M+EHGI+P V +Y +++   C  G  E     F+ + +  C
Sbjct: 350 IDGLCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKGGRLENAKEFFQHLLVKGC 409

Query: 83  ACPIWT 88
              +WT
Sbjct: 410 HLNVWT 415


>Glyma20g01300.1 
          Length = 640

 Score = 49.3 bits (116), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 21/65 (32%), Positives = 38/65 (58%)

Query: 16  SVGNFKLQIRGLCHSGDMERAVMFMGRMEEHGIRPGVQTYNVVIRYFCDAGEREKGLSMF 75
           +V  + + IRG+   GD+E+ + FM +ME+ GI P V TYN +I   C   + ++ +++ 
Sbjct: 181 NVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALL 240

Query: 76  EKMGM 80
             M +
Sbjct: 241 RAMAV 245


>Glyma15g41920.1 
          Length = 437

 Score = 48.9 bits (115), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 22/54 (40%), Positives = 33/54 (61%), Gaps = 1/54 (1%)

Query: 26  GLCHSGDMERAVMFMGRMEEHGI-RPGVQTYNVVIRYFCDAGEREKGLSMFEKM 78
           G C SG MERA+  +  ME+ G+  P V TY  VI+ FC  G+ ++ L + ++M
Sbjct: 238 GFCRSGSMERALELLDEMEKGGVCTPNVVTYTSVIQSFCKRGQWKEALDILDRM 291


>Glyma08g26050.1 
          Length = 475

 Score = 48.9 bits (115), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 22/54 (40%), Positives = 33/54 (61%), Gaps = 1/54 (1%)

Query: 26  GLCHSGDMERAVMFMGRMEEHGI-RPGVQTYNVVIRYFCDAGEREKGLSMFEKM 78
           G C SG MERA+  +  ME+ G+  P V TY  VI+ FC  G+ ++ L + ++M
Sbjct: 241 GFCRSGSMERALELLDEMEKGGVCTPNVVTYTSVIQSFCKRGQWKEALDILDRM 294


>Glyma09g33280.1 
          Length = 892

 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 37/65 (56%)

Query: 14  RSSVGNFKLQIRGLCHSGDMERAVMFMGRMEEHGIRPGVQTYNVVIRYFCDAGEREKGLS 73
           R +  ++   I GLC +G +  A+ F  RM E G  P V+TY V++   C++G   + LS
Sbjct: 252 RRNAVSYTNLIHGLCEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALS 311

Query: 74  MFEKM 78
           +F +M
Sbjct: 312 LFGEM 316



 Score = 46.6 bits (109), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 22/63 (34%), Positives = 31/63 (49%)

Query: 16  SVGNFKLQIRGLCHSGDMERAVMFMGRMEEHGIRPGVQTYNVVIRYFCDAGEREKGLSMF 75
           +V  + + +  LC SG    A+   G M E G  P V TY V+I Y C  G  ++ L M 
Sbjct: 289 TVRTYTVLVCALCESGRELEALSLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKML 348

Query: 76  EKM 78
            +M
Sbjct: 349 NEM 351


>Glyma06g21110.1 
          Length = 418

 Score = 48.5 bits (114), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/58 (39%), Positives = 33/58 (56%)

Query: 24  IRGLCHSGDMERAVMFMGRMEEHGIRPGVQTYNVVIRYFCDAGEREKGLSMFEKMGMV 81
           I G C +G++  A+     ME  GI P V TYN++I+  C +G  E+  S+ EKM  V
Sbjct: 178 IDGYCKAGNLPEAMQLRVEMERCGIFPDVVTYNILIKGLCGSGRLEEATSLIEKMDEV 235


>Glyma20g18010.1 
          Length = 632

 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 3/71 (4%)

Query: 24  IRGLCHSGDMERAVMFMGRMEEHGIRPGVQTYNVVIRYFCDAGEREKGLSMFEKMGMVCA 83
           I   C +GDM++A   +  ME  GI+P ++TY  +I  +  A   EK LS FE+M +   
Sbjct: 468 INACCKAGDMQKATEIIQEMEASGIKPNLKTYTTLINGWARASMPEKALSCFEEMKLAGF 527

Query: 84  CP---IWTCIM 91
            P   ++ C++
Sbjct: 528 KPDKAVYHCLV 538


>Glyma17g05680.1 
          Length = 496

 Score = 47.4 bits (111), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 19/63 (30%), Positives = 35/63 (55%)

Query: 20  FKLQIRGLCHSGDMERAVMFMGRMEEHGIRPGVQTYNVVIRYFCDAGEREKGLSMFEKMG 79
           F + IRGLC +GD++ A   +G M   G  P + TYN+++   C   + ++   + E++ 
Sbjct: 202 FNILIRGLCTAGDVDEAFELLGDMGSFGCSPDIVTYNILLHGLCRIDQVDRARDLLEEVC 261

Query: 80  MVC 82
           + C
Sbjct: 262 LKC 264


>Glyma03g34810.1 
          Length = 746

 Score = 47.4 bits (111), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 18/60 (30%), Positives = 34/60 (56%)

Query: 19  NFKLQIRGLCHSGDMERAVMFMGRMEEHGIRPGVQTYNVVIRYFCDAGEREKGLSMFEKM 78
           ++ + +   C  GD+++A++   +MEE G+ P   T+N VI  FC+ GE +   +   +M
Sbjct: 322 SYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVISKFCETGEVDHAETWVRRM 381


>Glyma14g24760.1 
          Length = 640

 Score = 47.0 bits (110), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 3/75 (4%)

Query: 7   LISPLRLRS---SVGNFKLQIRGLCHSGDMERAVMFMGRMEEHGIRPGVQTYNVVIRYFC 63
           L + LR R    SV  +   I GLC  GD++ A+     M +HG  P V T+ +++R FC
Sbjct: 318 LFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFC 377

Query: 64  DAGEREKGLSMFEKM 78
             G       +F++M
Sbjct: 378 KLGNLPMAKELFDEM 392