Miyakogusa Predicted Gene

Lj3g3v2657810.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2657810.1 Non Chatacterized Hit- tr|Q9LIV4|Q9LIV4_ORYSJ
Putative uncharacterized protein OS=Oryza sativa subsp,39.16,2e-19,
,CUFF.44334.1
         (173 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g17980.1                                                       130   1e-30
Glyma04g07830.2                                                       126   1e-29
Glyma04g07830.1                                                       126   1e-29
Glyma14g16950.2                                                       124   6e-29
Glyma14g16950.1                                                       124   6e-29
Glyma06g07900.1                                                       121   3e-28
Glyma17g29750.1                                                        52   3e-07

>Glyma11g17980.1 
          Length = 204

 Score =  130 bits (326), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 66/143 (46%), Positives = 94/143 (65%), Gaps = 4/143 (2%)

Query: 1   MAATVQQMVRSTVIVLGILAVLFGFMADNTKPVAGTPLLAGDG-TRTCNFPHDPTTALRY 59
           MAATV+QM    V +LG+++ + G +A+N KPVAGTP+   DG + TC +P DPT AL Y
Sbjct: 1   MAATVKQM-SLIVSLLGVVSFILGVVAENKKPVAGTPVPGSDGISVTCKYPADPTVALGY 59

Query: 60  PLTG--ISYCILRDWAPVYPYKGKVVPKRAMFKNRLFTGFFSLALFITGSATTMLLWPTI 117
             T   ++  ++   +  YPYKGK +P+  +FK+  FT FF+++LF  G A  MLLWPTI
Sbjct: 60  LSTAFLVASTVIGYMSLFYPYKGKSIPQGILFKHTTFTVFFNISLFTAGLAAAMLLWPTI 119

Query: 118 PQQVHLKNNVYHDFSHECPPVKT 140
            + +HL  NV+ + S+ECP  KT
Sbjct: 120 TEHIHLTRNVHQNLSYECPTAKT 142


>Glyma04g07830.2 
          Length = 195

 Score =  126 bits (316), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 73/156 (46%), Positives = 96/156 (61%), Gaps = 5/156 (3%)

Query: 1   MAATVQQMVRSTVIVLGILAVLFGFMADNTKPVAGTPLLAGDGTRTCNFPHDPTTALRY- 59
           MA TV+ M   TV   G+L+ + G +A+N KP AGTP+   DG  TC FP DPT AL Y 
Sbjct: 1   MAVTVKLMAL-TVSFFGLLSFILGVIAENKKPPAGTPVFGKDGV-TCKFPADPTVALGYL 58

Query: 60  -PLTGISYCILRDWAPVYPYKGKVVPKRAMFKNRLFTGFFSLALFITGSATTMLLWPTIP 118
             +  I+  ++   +  YPYKGK VP+  +FK+  F  FF++ALF TG A TMLLWPTI 
Sbjct: 59  SVIFLIASTVVGYLSLFYPYKGKTVPQGVLFKSMTFAVFFNVALFSTGLAATMLLWPTIT 118

Query: 119 QQVHLKNNVYHDFSHECPPVKTSDDLGVGVILIIDS 154
           + +HLK NV+ D ++ CP  KT    G G  L +DS
Sbjct: 119 EHLHLKRNVHLDLTYTCPTAKTG-LFGGGAFLSLDS 153


>Glyma04g07830.1 
          Length = 195

 Score =  126 bits (316), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 73/156 (46%), Positives = 96/156 (61%), Gaps = 5/156 (3%)

Query: 1   MAATVQQMVRSTVIVLGILAVLFGFMADNTKPVAGTPLLAGDGTRTCNFPHDPTTALRY- 59
           MA TV+ M   TV   G+L+ + G +A+N KP AGTP+   DG  TC FP DPT AL Y 
Sbjct: 1   MAVTVKLMAL-TVSFFGLLSFILGVIAENKKPPAGTPVFGKDGV-TCKFPADPTVALGYL 58

Query: 60  -PLTGISYCILRDWAPVYPYKGKVVPKRAMFKNRLFTGFFSLALFITGSATTMLLWPTIP 118
             +  I+  ++   +  YPYKGK VP+  +FK+  F  FF++ALF TG A TMLLWPTI 
Sbjct: 59  SVIFLIASTVVGYLSLFYPYKGKTVPQGVLFKSMTFAVFFNVALFSTGLAATMLLWPTIT 118

Query: 119 QQVHLKNNVYHDFSHECPPVKTSDDLGVGVILIIDS 154
           + +HLK NV+ D ++ CP  KT    G G  L +DS
Sbjct: 119 EHLHLKRNVHLDLTYTCPTAKTG-LFGGGAFLSLDS 153


>Glyma14g16950.2 
          Length = 205

 Score =  124 bits (310), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 64/143 (44%), Positives = 91/143 (63%), Gaps = 4/143 (2%)

Query: 1   MAATVQQMVRSTVIVLGILAVLFGFMADNTKPVAGTPLLAGDGTR-TCNFPHDPTTALRY 59
           MAATV+QM    V + G+++ + G +A+N KP AGTP+   DG   TC +P DPT AL Y
Sbjct: 1   MAATVKQM-SLIVSLFGVVSFILGVVAENKKPAAGTPVPGLDGVSVTCKYPADPTVALGY 59

Query: 60  PLTG--ISYCILRDWAPVYPYKGKVVPKRAMFKNRLFTGFFSLALFITGSATTMLLWPTI 117
             T   ++  +    +  YPYKGK +P+  +FK+  FT FF+++LF TG A  MLLWPTI
Sbjct: 60  LSTAFLVASTVTGYLSLFYPYKGKSIPQGVLFKHTTFTVFFNISLFTTGLAAAMLLWPTI 119

Query: 118 PQQVHLKNNVYHDFSHECPPVKT 140
            + +HL  NV+ + ++ECP  KT
Sbjct: 120 TEHIHLTRNVHRNINYECPTAKT 142


>Glyma14g16950.1 
          Length = 205

 Score =  124 bits (310), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 64/143 (44%), Positives = 91/143 (63%), Gaps = 4/143 (2%)

Query: 1   MAATVQQMVRSTVIVLGILAVLFGFMADNTKPVAGTPLLAGDGTR-TCNFPHDPTTALRY 59
           MAATV+QM    V + G+++ + G +A+N KP AGTP+   DG   TC +P DPT AL Y
Sbjct: 1   MAATVKQM-SLIVSLFGVVSFILGVVAENKKPAAGTPVPGLDGVSVTCKYPADPTVALGY 59

Query: 60  PLTG--ISYCILRDWAPVYPYKGKVVPKRAMFKNRLFTGFFSLALFITGSATTMLLWPTI 117
             T   ++  +    +  YPYKGK +P+  +FK+  FT FF+++LF TG A  MLLWPTI
Sbjct: 60  LSTAFLVASTVTGYLSLFYPYKGKSIPQGVLFKHTTFTVFFNISLFTTGLAAAMLLWPTI 119

Query: 118 PQQVHLKNNVYHDFSHECPPVKT 140
            + +HL  NV+ + ++ECP  KT
Sbjct: 120 TEHIHLTRNVHRNINYECPTAKT 142


>Glyma06g07900.1 
          Length = 191

 Score =  121 bits (304), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 72/156 (46%), Positives = 95/156 (60%), Gaps = 5/156 (3%)

Query: 1   MAATVQQMVRSTVIVLGILAVLFGFMADNTKPVAGTPLLAGDGTRTCNFPHDPTTALRY- 59
           MA TV+ M    V   G+L+ + G +A+N KP AG P+   DG  TC F  D T AL Y 
Sbjct: 1   MAVTVKLMAL-IVSFFGLLSFILGVIAENKKPPAGMPVPVKDGV-TCKFSADLTLALGYL 58

Query: 60  -PLTGISYCILRDWAPVYPYKGKVVPKRAMFKNRLFTGFFSLALFITGSATTMLLWPTIP 118
             +  I+  ++   +  YPYKGK VP+R +FK+  F  FF++ALF TG A TMLLWPTI 
Sbjct: 59  SVIFLIASTVVGYLSLFYPYKGKAVPQRVLFKSTTFMVFFNVALFSTGLALTMLLWPTIT 118

Query: 119 QQVHLKNNVYHDFSHECPPVKTSDDLGVGVILIIDS 154
           + +HLK NV+HD ++ CP  KT   LG G  L +DS
Sbjct: 119 EHLHLKRNVHHDLTYTCPTAKTG-LLGGGAFLSLDS 153


>Glyma17g29750.1 
          Length = 92

 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 20/38 (52%), Positives = 25/38 (65%)

Query: 103 FITGSATTMLLWPTIPQQVHLKNNVYHDFSHECPPVKT 140
           F  G A  MLLWPTI + +HL  NV+ + S+ECP  KT
Sbjct: 1   FTAGLAAAMLLWPTITEHIHLTRNVHQNLSYECPTAKT 38