Miyakogusa Predicted Gene
- Lj3g3v2634540.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v2634540.1 tr|Q5W796|Q5W796_ORYSJ Os05g0357600 protein
OS=Oryza sativa subsp. japonica GN=OJ1045_C06.7 PE=2
SV=,92.23,0,P-loop containing nucleoside triphosphate hydrolases,NULL;
TGS-like,TGS-like; GTP1_OBG,GTP1/OBG, con,CUFF.44325.1
(399 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma07g04170.1 768 0.0
Glyma16g00880.1 765 0.0
Glyma06g15180.2 416 e-116
Glyma04g39690.1 415 e-116
Glyma06g15180.1 396 e-110
Glyma13g28800.1 64 2e-10
Glyma15g10260.1 62 9e-10
Glyma01g35080.1 59 9e-09
Glyma14g07630.1 56 8e-08
Glyma17g37330.1 55 1e-07
Glyma17g29410.1 50 3e-06
Glyma08g25670.2 49 7e-06
>Glyma07g04170.1
Length = 399
Score = 768 bits (1983), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/399 (93%), Positives = 383/399 (95%)
Query: 1 MGIIERIKEIEAEMARTQKNKATEYHLGQLKAKIAKLRTQXXXXXXXXXXXXXXFEVTKF 60
MGIIE+IKEIEAEMARTQKNKATEYHLGQLKAKIAKLRTQ FEVTKF
Sbjct: 1 MGIIEKIKEIEAEMARTQKNKATEYHLGQLKAKIAKLRTQLLEPPKGSSGGGEGFEVTKF 60
Query: 61 GHGRVALIGFPSVGKSTLLTMLTGTHSEAASYEFTTLTCIPGIIHYNDTKIQLLDLPGII 120
GHGRVALIGFPSVGKSTLLTMLTGTHSEAASYEFTTLTCIPGIIHYNDTKIQLLDLPGII
Sbjct: 61 GHGRVALIGFPSVGKSTLLTMLTGTHSEAASYEFTTLTCIPGIIHYNDTKIQLLDLPGII 120
Query: 121 EGASEGKGRGRQVIAVAKSSDIVLMVLDASKSEGHRQILTKELEAVGLRLNQRPPQIYFK 180
EGASEGKGRGRQVIAVAKSSDIVLMVLDASKSEGHRQILTKELEAVGLRLN+RPPQIYFK
Sbjct: 121 EGASEGKGRGRQVIAVAKSSDIVLMVLDASKSEGHRQILTKELEAVGLRLNKRPPQIYFK 180
Query: 181 KKKTGGISFNSTMPLTHVDEKLCYQILHEYKIHNAEILFREDATVDDLIDVIEGNRKYMK 240
KKKTGGISFNST+PLTHVDEKLCYQILHEYKIHNAEILFREDATVDDLIDVIEGNRKYMK
Sbjct: 181 KKKTGGISFNSTLPLTHVDEKLCYQILHEYKIHNAEILFREDATVDDLIDVIEGNRKYMK 240
Query: 241 CVYVYNKIDVVGIDDVDRLARQPNSVVISCNLKLNLDRLLSRMWDEMGLVRVYTKPQGQQ 300
CVYVYNKIDV+GIDDVDRLARQPNSVVISCNLKLNLDRLL+RMWDEMGLVRVYTKPQGQQ
Sbjct: 241 CVYVYNKIDVIGIDDVDRLARQPNSVVISCNLKLNLDRLLARMWDEMGLVRVYTKPQGQQ 300
Query: 301 PDFAEPVVLSADRGGCTVEDFCNHIHRSLVKDVKYVLVWGTSARHYPQHCGLAHYLNDED 360
PDF +PVVLSADRGGCTVEDFCNHIHRSLVKDVKYVLVWGTSARHYPQHCGL+H L+DED
Sbjct: 301 PDFGDPVVLSADRGGCTVEDFCNHIHRSLVKDVKYVLVWGTSARHYPQHCGLSHNLHDED 360
Query: 361 VVQIVKKKERDEGGRGRFKSHSNAPARISDREKKAPLKT 399
VVQIVKKKE++EGGRGRFKSHSNAPARISDREKKAPLKT
Sbjct: 361 VVQIVKKKEKEEGGRGRFKSHSNAPARISDREKKAPLKT 399
>Glyma16g00880.1
Length = 399
Score = 765 bits (1976), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/399 (93%), Positives = 381/399 (95%)
Query: 1 MGIIERIKEIEAEMARTQKNKATEYHLGQLKAKIAKLRTQXXXXXXXXXXXXXXFEVTKF 60
MGIIE+IKEIEAEMARTQKNKATEYHLGQLKAKIAKLRTQ FEVTKF
Sbjct: 1 MGIIEKIKEIEAEMARTQKNKATEYHLGQLKAKIAKLRTQLLEPPKGSSGGGEGFEVTKF 60
Query: 61 GHGRVALIGFPSVGKSTLLTMLTGTHSEAASYEFTTLTCIPGIIHYNDTKIQLLDLPGII 120
GHGRVALIGFPSVGKSTLLTMLTGTHSEAASYEFTTLTCIPGIIHYNDTKIQLLDLPGII
Sbjct: 61 GHGRVALIGFPSVGKSTLLTMLTGTHSEAASYEFTTLTCIPGIIHYNDTKIQLLDLPGII 120
Query: 121 EGASEGKGRGRQVIAVAKSSDIVLMVLDASKSEGHRQILTKELEAVGLRLNQRPPQIYFK 180
EGASEGKGRGRQVIAVAKSSDIVLMVLDASKSEGHRQILTKELEAVGLRLN+RPPQIYFK
Sbjct: 121 EGASEGKGRGRQVIAVAKSSDIVLMVLDASKSEGHRQILTKELEAVGLRLNKRPPQIYFK 180
Query: 181 KKKTGGISFNSTMPLTHVDEKLCYQILHEYKIHNAEILFREDATVDDLIDVIEGNRKYMK 240
KKKTGGISFNST+PLTHVDEKLCYQILHEYKIHNAEILFREDATVDDLIDVIEGNRKYMK
Sbjct: 181 KKKTGGISFNSTLPLTHVDEKLCYQILHEYKIHNAEILFREDATVDDLIDVIEGNRKYMK 240
Query: 241 CVYVYNKIDVVGIDDVDRLARQPNSVVISCNLKLNLDRLLSRMWDEMGLVRVYTKPQGQQ 300
CVYVYNKIDV+GIDDVDRLARQPNSVVISCNLKLNLDRLL+RMWDEMGLVRVYTKPQGQQ
Sbjct: 241 CVYVYNKIDVIGIDDVDRLARQPNSVVISCNLKLNLDRLLARMWDEMGLVRVYTKPQGQQ 300
Query: 301 PDFAEPVVLSADRGGCTVEDFCNHIHRSLVKDVKYVLVWGTSARHYPQHCGLAHYLNDED 360
PDF +PVVLSADRGGCTVEDFCNHIHRSLVKDVKYVLVWG SARHYPQHCGL+H L DED
Sbjct: 301 PDFGDPVVLSADRGGCTVEDFCNHIHRSLVKDVKYVLVWGISARHYPQHCGLSHNLRDED 360
Query: 361 VVQIVKKKERDEGGRGRFKSHSNAPARISDREKKAPLKT 399
VVQIVKKKE++EGGRGRFKSHSNAPARISDREKKAPLKT
Sbjct: 361 VVQIVKKKEKEEGGRGRFKSHSNAPARISDREKKAPLKT 399
>Glyma06g15180.2
Length = 368
Score = 416 bits (1070), Expect = e-116, Method: Compositional matrix adjust.
Identities = 203/366 (55%), Positives = 267/366 (72%), Gaps = 3/366 (0%)
Query: 3 IIERIKEIEAEMARTQKNKATEYHLGQLKAKIAKLRTQXXXXXXXXXXXXXX-FEVTKFG 61
++++IK+IE EMARTQKNKAT +HLG LKAK+AKLR + F+VTK G
Sbjct: 4 VMQKIKDIEDEMARTQKNKATAHHLGLLKAKLAKLRRELLTPSSKGAGGAGEGFDVTKSG 63
Query: 62 HGRVALIGFPSVGKSTLLTMLTGTHSEAASYEFTTLTCIPGIIHYNDTKIQLLDLPGIIE 121
RV L+GFPSVGKSTLL LTGT SE ASYEFTTLTCIPG+I Y KIQLLDLPGIIE
Sbjct: 64 DSRVGLVGFPSVGKSTLLNKLTGTFSEVASYEFTTLTCIPGVITYRGAKIQLLDLPGIIE 123
Query: 122 GASEGKGRGRQVIAVAKSSDIVLMVLDASKSEGHRQILTKELEAVGLRLNQRPPQIYFKK 181
GA +GKGRGRQVI+ A++ + +L+VLDA K H++++ KELE G+RLN+ PP + F+K
Sbjct: 124 GAKDGKGRGRQVISTARTCNCILIVLDAIKPITHKRLIEKELEGFGIRLNKEPPNLTFRK 183
Query: 182 KKTGGISFNSTMPLTHVDEKLCYQILHEYKIHNAEILFREDATVDDLIDVIEGNRKYMKC 241
K GG++ ST+ TH+D + I EY+IHNA+I R DAT DDLIDVIEG+R Y+ C
Sbjct: 184 KDKGGLNLTSTVTTTHLDLETVKAICSEYRIHNADITLRYDATADDLIDVIEGSRVYIPC 243
Query: 242 VYVYNKIDVVGIDDVDRLARQPNSVVISCNLKLNLDRLLSRMWDEMGLVRVYTKPQGQQP 301
+YV NKID + +++++ L + P+ IS +L+ NLD LL ++W+ + L R+YTKP+G P
Sbjct: 244 IYVVNKIDQITLEELEILDKLPHYCPISAHLEWNLDGLLEKIWEYLDLTRIYTKPKGMNP 303
Query: 302 DFAEPVVLSADRGGCTVEDFCNHIHRSLVKDVKYVLVWGTSARHYPQHCGLAHYLNDEDV 361
D+ +PV+LS+ + TVEDFC+ IH+ ++K KY LVWG+SA+H PQ G H L DEDV
Sbjct: 304 DYEDPVILSSKKR--TVEDFCDRIHKDMLKQFKYALVWGSSAKHKPQRVGKEHELEDEDV 361
Query: 362 VQIVKK 367
VQI+KK
Sbjct: 362 VQIIKK 367
>Glyma04g39690.1
Length = 368
Score = 415 bits (1067), Expect = e-116, Method: Compositional matrix adjust.
Identities = 202/366 (55%), Positives = 267/366 (72%), Gaps = 3/366 (0%)
Query: 3 IIERIKEIEAEMARTQKNKATEYHLGQLKAKIAKLRTQXXXXXXXXXXXXXX-FEVTKFG 61
++++IK+IE EMA+TQKNKAT +HLG LKAK+AKLR + F+VTK G
Sbjct: 4 VMQKIKDIEDEMAKTQKNKATAHHLGLLKAKLAKLRRELLTPSSKGAGGAGEGFDVTKSG 63
Query: 62 HGRVALIGFPSVGKSTLLTMLTGTHSEAASYEFTTLTCIPGIIHYNDTKIQLLDLPGIIE 121
RV L+GFPSVGKSTLL LTGT SE ASYEFTTLTCIPG+I Y KIQLLDLPGIIE
Sbjct: 64 DSRVGLVGFPSVGKSTLLNKLTGTFSEVASYEFTTLTCIPGVITYRGAKIQLLDLPGIIE 123
Query: 122 GASEGKGRGRQVIAVAKSSDIVLMVLDASKSEGHRQILTKELEAVGLRLNQRPPQIYFKK 181
GA +GKGRGRQVI+ A++ + +L+VLDA K H++++ KELE G+RLN+ PP + F+K
Sbjct: 124 GAKDGKGRGRQVISTARTCNCILIVLDAIKPITHKRLIEKELEGFGIRLNKEPPNLTFRK 183
Query: 182 KKTGGISFNSTMPLTHVDEKLCYQILHEYKIHNAEILFREDATVDDLIDVIEGNRKYMKC 241
K GG++ ST+ TH+D + I EY+IHNA+I R DAT DDLIDVIEG+R Y+ C
Sbjct: 184 KDKGGLNLTSTVTTTHLDLETVKAICSEYRIHNADITLRYDATADDLIDVIEGSRVYIPC 243
Query: 242 VYVYNKIDVVGIDDVDRLARQPNSVVISCNLKLNLDRLLSRMWDEMGLVRVYTKPQGQQP 301
+YV NKID + +++++ L + P+ IS +L+ NLD LL ++W+ + L R+YTKP+G P
Sbjct: 244 IYVVNKIDQITLEELEILDKLPHYCPISAHLEWNLDGLLEKIWEYLNLTRIYTKPKGMNP 303
Query: 302 DFAEPVVLSADRGGCTVEDFCNHIHRSLVKDVKYVLVWGTSARHYPQHCGLAHYLNDEDV 361
D+ +PV+LS+ + TVEDFC+ IH+ ++K KY LVWG+SA+H PQ G H L DEDV
Sbjct: 304 DYEDPVILSSKKR--TVEDFCDRIHKDMLKQFKYALVWGSSAKHKPQRVGKEHELEDEDV 361
Query: 362 VQIVKK 367
VQI+KK
Sbjct: 362 VQIIKK 367
>Glyma06g15180.1
Length = 379
Score = 396 bits (1017), Expect = e-110, Method: Compositional matrix adjust.
Identities = 192/350 (54%), Positives = 255/350 (72%), Gaps = 3/350 (0%)
Query: 3 IIERIKEIEAEMARTQKNKATEYHLGQLKAKIAKLRTQXXXXXXXXXXXXXX-FEVTKFG 61
++++IK+IE EMARTQKNKAT +HLG LKAK+AKLR + F+VTK G
Sbjct: 4 VMQKIKDIEDEMARTQKNKATAHHLGLLKAKLAKLRRELLTPSSKGAGGAGEGFDVTKSG 63
Query: 62 HGRVALIGFPSVGKSTLLTMLTGTHSEAASYEFTTLTCIPGIIHYNDTKIQLLDLPGIIE 121
RV L+GFPSVGKSTLL LTGT SE ASYEFTTLTCIPG+I Y KIQLLDLPGIIE
Sbjct: 64 DSRVGLVGFPSVGKSTLLNKLTGTFSEVASYEFTTLTCIPGVITYRGAKIQLLDLPGIIE 123
Query: 122 GASEGKGRGRQVIAVAKSSDIVLMVLDASKSEGHRQILTKELEAVGLRLNQRPPQIYFKK 181
GA +GKGRGRQVI+ A++ + +L+VLDA K H++++ KELE G+RLN+ PP + F+K
Sbjct: 124 GAKDGKGRGRQVISTARTCNCILIVLDAIKPITHKRLIEKELEGFGIRLNKEPPNLTFRK 183
Query: 182 KKTGGISFNSTMPLTHVDEKLCYQILHEYKIHNAEILFREDATVDDLIDVIEGNRKYMKC 241
K GG++ ST+ TH+D + I EY+IHNA+I R DAT DDLIDVIEG+R Y+ C
Sbjct: 184 KDKGGLNLTSTVTTTHLDLETVKAICSEYRIHNADITLRYDATADDLIDVIEGSRVYIPC 243
Query: 242 VYVYNKIDVVGIDDVDRLARQPNSVVISCNLKLNLDRLLSRMWDEMGLVRVYTKPQGQQP 301
+YV NKID + +++++ L + P+ IS +L+ NLD LL ++W+ + L R+YTKP+G P
Sbjct: 244 IYVVNKIDQITLEELEILDKLPHYCPISAHLEWNLDGLLEKIWEYLDLTRIYTKPKGMNP 303
Query: 302 DFAEPVVLSADRGGCTVEDFCNHIHRSLVKDVKYVLVWGTSARHYPQHCG 351
D+ +PV+LS+ + TVEDFC+ IH+ ++K KY LVWG+SA+H PQ G
Sbjct: 304 DYEDPVILSSKKR--TVEDFCDRIHKDMLKQFKYALVWGSSAKHKPQRVG 351
>Glyma13g28800.1
Length = 595
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 66/120 (55%), Gaps = 3/120 (2%)
Query: 65 VALIGFPSVGKSTLLTMLTGTHSEAASYEFTTLTCIPGIIHYN-DTKIQLLDLPGIIEGA 123
V ++G P+ GKSTLL++++ A+Y FTTL G++ ++ D+ + + DLPG++EGA
Sbjct: 298 VGIVGAPNAGKSTLLSVVSAAKPAVANYPFTTLLPNLGVVSFDYDSTMVVADLPGLLEGA 357
Query: 124 SEGKGRGRQVIAVAKSSDIVLMVLDASKSEGHRQI--LTKELEAVGLRLNQRPPQIYFKK 181
G G G + + + ++ V+D S + + + EL+ L ++P + F K
Sbjct: 358 HRGFGLGHEFLRHTERCSALVHVVDGSSQQPDLEFDAVRLELKLFNPELAEKPYVVAFNK 417
>Glyma15g10260.1
Length = 440
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 65/120 (54%), Gaps = 3/120 (2%)
Query: 65 VALIGFPSVGKSTLLTMLTGTHSEAASYEFTTLTCIPGIIHYN-DTKIQLLDLPGIIEGA 123
V ++G P+ GKSTLL+++ A+Y FTTL G++ ++ D+ + + DLPG++EGA
Sbjct: 161 VGIVGAPNAGKSTLLSVVCAAKPAVANYPFTTLLPNLGVVSFDYDSTMVVADLPGLLEGA 220
Query: 124 SEGKGRGRQVIAVAKSSDIVLMVLDASKSEGHRQI--LTKELEAVGLRLNQRPPQIYFKK 181
G G G + + + ++ V+D S + + EL+ +L ++P + F K
Sbjct: 221 HRGFGLGHEFLRHTERCASLVHVVDVSSPLPDLEFDAVCLELKLFNPKLAEKPYVVAFNK 280
>Glyma01g35080.1
Length = 319
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 65/131 (49%), Gaps = 9/131 (6%)
Query: 65 VALIGFPSVGKSTLLTMLTGTHSEAASYEFTTLTCIPGIIHYNDTKIQLLDLPGIIEGAS 124
V+ +G P+ GKSTLL ++ Y FTTL G ++Y+D I + D+PG+I+GA
Sbjct: 134 VSFVGMPNAGKSTLLGAISRAKPAVGDYAFTTLRPNLGNLNYDDLSITVADIPGLIKGAH 193
Query: 125 EGKGRGRQVIAVAKSSDIVLMVLD-ASKSEGHRQI--------LTKELEAVGLRLNQRPP 175
+ +G G + + + ++ V+D A+ G + I L ELE L++RP
Sbjct: 194 QNRGLGHAFLRHIERTKVLAYVVDLAAALNGRKGIPPWEQLRDLILELEYHQDGLSKRPS 253
Query: 176 QIYFKKKKTGG 186
I K G
Sbjct: 254 LIVANKTDEEG 264
>Glyma14g07630.1
Length = 323
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 52/94 (55%), Gaps = 8/94 (8%)
Query: 65 VALIGFPSVGKSTLLTMLTGTHSEAASYEFTTLTCIPGIIHYN--------DTKIQLLDL 116
+ LIG P+ GKSTLL +T + A Y FTTL G + + ++ L DL
Sbjct: 100 IGLIGLPNAGKSTLLAAITLAKPDIADYPFTTLMPNLGRLGGDPSLGAGMYSSEATLADL 159
Query: 117 PGIIEGASEGKGRGRQVIAVAKSSDIVLMVLDAS 150
PG+IEGA GKG GR + + + +++ V+DA+
Sbjct: 160 PGLIEGAHLGKGLGRNFLRHLRRTRLLVHVVDAA 193
>Glyma17g37330.1
Length = 274
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 52/96 (54%), Gaps = 12/96 (12%)
Query: 65 VALIGFPSVGKSTLLTMLTGTHSEAASYEFTTLTCIPGIIHYN----------DTKIQLL 114
V LIG P+ GKSTLL +T + A Y FTTL +P + ++ L
Sbjct: 103 VGLIGLPNAGKSTLLAAITLAKPDIADYPFTTL--MPNLGRLGGDPSLGAGMYSSEATLA 160
Query: 115 DLPGIIEGASEGKGRGRQVIAVAKSSDIVLMVLDAS 150
DLPG+IEGA GKG GR + + + +++ V+DA+
Sbjct: 161 DLPGLIEGAHLGKGLGRNFLRHLRRTRLLVHVVDAA 196
>Glyma17g29410.1
Length = 103
Score = 50.4 bits (119), Expect = 3e-06, Method: Composition-based stats.
Identities = 32/90 (35%), Positives = 47/90 (52%), Gaps = 8/90 (8%)
Query: 69 GFPSVGKSTLLTMLTGTHSEAASYEFTTLTCIPGIIHYN--------DTKIQLLDLPGII 120
G P+ GKSTLL +T + A Y FTTL G + + ++ L DL G+I
Sbjct: 1 GLPNAGKSTLLAAITLAKPDIADYPFTTLMLNLGRLGGDPSFGAGMYSSEATLADLHGLI 60
Query: 121 EGASEGKGRGRQVIAVAKSSDIVLMVLDAS 150
EGA GKG GR + + +++ V+DA+
Sbjct: 61 EGAHLGKGLGRDFFRHLRRTRLLVHVVDAA 90
>Glyma08g25670.2
Length = 420
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 55/102 (53%), Gaps = 18/102 (17%)
Query: 64 RVALIGFPSVGKSTLL-TMLTGTHSEAASYEFTTLTCIPGIIHYNDTK------------ 110
+ ++G P+VGKSTL ++ ++AA++ F T+ GI+ D++
Sbjct: 55 KAGIVGLPNVGKSTLFNAVVENGKAQAANFPFCTIEPNVGIVAVPDSRLHVLSDLSKSQR 114
Query: 111 -----IQLLDLPGIIEGASEGKGRGRQVIAVAKSSDIVLMVL 147
I+ +D+ G+++GAS+G+G G + ++ + D +L V+
Sbjct: 115 AVPASIEFVDIAGLVKGASQGEGLGNKFLSHIREVDSILQVV 156