Miyakogusa Predicted Gene

Lj3g3v2578300.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2578300.1 tr|A0MSK8|A0MSK8_NICBE Nodulation signaling
pathway 1-like protein OS=Nicotiana benthamiana PE=2
SV=,77.19,2e-19,GRAS,Transcription factor GRAS,CUFF.44354.1
         (57 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma16g01020.1                                                       111   1e-25
Glyma07g04430.1                                                       108   2e-24

>Glyma16g01020.1 
          Length = 490

 Score =  111 bits (278), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 51/57 (89%), Positives = 52/57 (91%)

Query: 1   MEGEAAKALTNQREMNEEKEKWCGRMKEAGFAGEVFGEDAVDGGRALLRKYDSNWEM 57
           MEGEAAKALTNQRE NE KEKWC RMKEAGF GEVFGEDA+DGGRALLRKYD NWEM
Sbjct: 422 MEGEAAKALTNQRETNEGKEKWCERMKEAGFVGEVFGEDAIDGGRALLRKYDGNWEM 478


>Glyma07g04430.1 
          Length = 520

 Score =  108 bits (269), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 50/57 (87%), Positives = 52/57 (91%)

Query: 1   MEGEAAKALTNQREMNEEKEKWCGRMKEAGFAGEVFGEDAVDGGRALLRKYDSNWEM 57
           MEGEAAKALTNQRE NE KEKWC RMKEAGF  EVFGEDA+DGGRALLRKY+SNWEM
Sbjct: 430 MEGEAAKALTNQRETNEGKEKWCERMKEAGFVEEVFGEDAIDGGRALLRKYESNWEM 486