Miyakogusa Predicted Gene

Lj3g3v2578270.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2578270.1 tr|Q4VYC9|Q4VYC9_MEDTR Baculoviral IAP
repeat-containing protein OS=Medicago truncatula GN=ZFP PE=4
,82.03,0,GIDE,E3 Ubiquitin ligase; seg,NULL,CUFF.44353.1
         (292 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g13060.1                                                       448   e-126
Glyma18g27930.1                                                       446   e-125
Glyma16g01030.1                                                       439   e-123

>Glyma03g13060.1 
          Length = 388

 Score =  448 bits (1152), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 222/282 (78%), Positives = 240/282 (85%), Gaps = 9/282 (3%)

Query: 19  FDGAVLGLAIAYAAVRTIVKFTATSAALRKINQAPXXXXXXXXXXXXX--------XXXG 70
           FDGAVLGLA+AYAAVRT+ KFTATSAALRK+++AP                        G
Sbjct: 19  FDGAVLGLALAYAAVRTLFKFTATSAALRKLHRAPSVSVSDLRSLLAEIPSDADGNSDGG 78

Query: 71  KIVIVRGTVDAKAAVDG-SWKTFRPGVLVSRETGDRGVILQRTETCIYNEWKGLFGWTSD 129
            IVIVRGTVDAK+ V+G +WKT RPGVLVSRE+GD+ VILQRT+TCIYNEWKGLFGWTSD
Sbjct: 79  NIVIVRGTVDAKSTVEGGTWKTLRPGVLVSRESGDKSVILQRTQTCIYNEWKGLFGWTSD 138

Query: 130 LRAIVTRSWRQQESTSLRKVPFVLIDVGRQPYPEYVVVNLDGSRHPLPLITVYHKLQPIS 189
           LRAI  RSWRQQESTSLRKVPFVLIDVGR P  EYVVVN+DGSRHPLPL TVYHKLQPI+
Sbjct: 139 LRAIFARSWRQQESTSLRKVPFVLIDVGRWPNAEYVVVNMDGSRHPLPLSTVYHKLQPIT 198

Query: 190 PSPYSFLQALFGHEYPVGLLDEEKILPLGKDISAVGLCNLRNGIAEIKSCKDLPYFLSDL 249
            SPY+FLQALFGHEYPVGLLDEEKILPLGK+I+AVGLC+L+NGIAEIKSCKDLPYFLSDL
Sbjct: 199 ASPYTFLQALFGHEYPVGLLDEEKILPLGKNITAVGLCSLKNGIAEIKSCKDLPYFLSDL 258

Query: 250 DKDQMIVDLSFKTKILFWSGIVLGSMSVGVLSYAVVRNWNKW 291
            KDQMIVDLS KTKILFW GI LGSMSVGVL YAVVRNWNKW
Sbjct: 259 SKDQMIVDLSSKTKILFWGGIALGSMSVGVLGYAVVRNWNKW 300


>Glyma18g27930.1 
          Length = 387

 Score =  446 bits (1146), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 218/280 (77%), Positives = 237/280 (84%), Gaps = 8/280 (2%)

Query: 20  DGAVLGLAIAYAAVRTIVKFTATSAALRKINQAPXXXXXXXXXXXXX--------XXXGK 71
           DGAVLG A+AYAAVRT+ KFTATS+ALRK+ +AP                        G 
Sbjct: 20  DGAVLGFALAYAAVRTLFKFTATSSALRKLRRAPSLSVSDLRSLLAEIPSDGDGNSKGGI 79

Query: 72  IVIVRGTVDAKAAVDGSWKTFRPGVLVSRETGDRGVILQRTETCIYNEWKGLFGWTSDLR 131
           IVIVRGTVDAK+AVDG+WKT RPGVLVSRE+GD+GVILQRT+TCIYNEWKGLFGWTSDLR
Sbjct: 80  IVIVRGTVDAKSAVDGTWKTLRPGVLVSRESGDKGVILQRTQTCIYNEWKGLFGWTSDLR 139

Query: 132 AIVTRSWRQQESTSLRKVPFVLIDVGRQPYPEYVVVNLDGSRHPLPLITVYHKLQPISPS 191
           AI  RSWRQQESTSLRKVPF+L DVGR+P  EYVVVN+DGSRHPLPL TVYHKLQPI+ S
Sbjct: 140 AIFARSWRQQESTSLRKVPFLLTDVGRRPNAEYVVVNMDGSRHPLPLTTVYHKLQPITAS 199

Query: 192 PYSFLQALFGHEYPVGLLDEEKILPLGKDISAVGLCNLRNGIAEIKSCKDLPYFLSDLDK 251
           PY+FLQALFGHEYPVGLLDEEKILPLGKDI+AVGLC+L+NGIAEIKSCK LPYF SDL K
Sbjct: 200 PYTFLQALFGHEYPVGLLDEEKILPLGKDITAVGLCSLKNGIAEIKSCKYLPYFRSDLSK 259

Query: 252 DQMIVDLSFKTKILFWSGIVLGSMSVGVLSYAVVRNWNKW 291
           DQMI+DLS KTKILFW GI LGSMSVGVL YAVVRNWNKW
Sbjct: 260 DQMIMDLSIKTKILFWGGIALGSMSVGVLGYAVVRNWNKW 299


>Glyma16g01030.1 
          Length = 383

 Score =  439 bits (1128), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 212/278 (76%), Positives = 238/278 (85%), Gaps = 4/278 (1%)

Query: 19  FDGAVLGLAIAYAAVRTIVKFTATSAALRKINQAPXXXXXXXXXXXXX----XXXGKIVI 74
           FDGAVLG+A+A+AAVRT+ KFTATSA+LRK+ +AP                    G+IVI
Sbjct: 19  FDGAVLGVALAFAAVRTLFKFTATSASLRKLRRAPSISVSDLRSLLAEPPSDADAGEIVI 78

Query: 75  VRGTVDAKAAVDGSWKTFRPGVLVSRETGDRGVILQRTETCIYNEWKGLFGWTSDLRAIV 134
           +RGTVDAK+AVDG+WKT +PGVLVSRE+GD+GVILQRT+TCIYN+WKGL GWTSDLRAI 
Sbjct: 79  IRGTVDAKSAVDGTWKTLKPGVLVSRESGDKGVILQRTQTCIYNDWKGLLGWTSDLRAIC 138

Query: 135 TRSWRQQESTSLRKVPFVLIDVGRQPYPEYVVVNLDGSRHPLPLITVYHKLQPISPSPYS 194
            RS RQQ+STS RKVPFVLIDVGR+P  EYVVVN+DGSRHPLPL TVYHKLQPI+ SPY+
Sbjct: 139 ARSLRQQDSTSFRKVPFVLIDVGRRPNAEYVVVNMDGSRHPLPLTTVYHKLQPINASPYT 198

Query: 195 FLQALFGHEYPVGLLDEEKILPLGKDISAVGLCNLRNGIAEIKSCKDLPYFLSDLDKDQM 254
           FLQALFGHEYPVGLLDEEKILPLGKDI+AVG C+L+NGIAEIKSCKD+PYFLSDL KDQM
Sbjct: 199 FLQALFGHEYPVGLLDEEKILPLGKDITAVGHCSLKNGIAEIKSCKDIPYFLSDLSKDQM 258

Query: 255 IVDLSFKTKILFWSGIVLGSMSVGVLSYAVVRNWNKWK 292
           IVDLS K KILFW GI LGSMSVGVL YAV+RNW KWK
Sbjct: 259 IVDLSIKAKILFWGGISLGSMSVGVLGYAVLRNWIKWK 296