Miyakogusa Predicted Gene

Lj3g3v2576770.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2576770.1 Non Chatacterized Hit- tr|K4CE63|K4CE63_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,48.89,0.000000000000008,G-gamma,G-protein gamma-like domain;
coiled-coil,NULL; seg,NULL,CUFF.44287.1
         (138 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g04510.1                                                       171   3e-43
Glyma15g19630.1                                                        86   2e-17
Glyma17g05640.1                                                        79   2e-15

>Glyma07g04510.1 
          Length = 160

 Score =  171 bits (432), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 91/142 (64%), Positives = 106/142 (74%), Gaps = 7/142 (4%)

Query: 3   QQRMSPKSPLPGFVDFHGKRKQMVKIQVLEREIGVLQEELKSLEGLHPASRCCKELDAFV 62
           +Q M PKSPLPG VDFHGKRKQMVKIQVLEREIG+LQE LKSLEGL+PASRCCKELDAFV
Sbjct: 20  EQVMRPKSPLPGLVDFHGKRKQMVKIQVLEREIGLLQE-LKSLEGLNPASRCCKELDAFV 78

Query: 63  GSISDPFTPIRKESDTESHHFRKQICSVPWICCSSSCLLQKKMAK-----LXXXXXXXXX 117
            S+SDPFTP RK++ ++SHHFR+Q+ S+P +CCS+SCLL KK AK               
Sbjct: 79  DSVSDPFTPTRKQTVSKSHHFRRQMISLPRVCCSNSCLLHKKTAKGCCWDCCSSSNSKCC 138

Query: 118 XXXXXXXXXLKTASK-CAQNCC 138
                    LK+AS+ CAQNCC
Sbjct: 139 HCCGCCCCCLKSASRSCAQNCC 160


>Glyma15g19630.1 
          Length = 177

 Score = 85.5 bits (210), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 48/107 (44%), Positives = 66/107 (61%), Gaps = 9/107 (8%)

Query: 7   SPKSPLPGFVDFHGKRKQMVKIQVLEREIGVLQEELKSLEGLHPASRCCKELDAFVGSIS 66
           +PK+P  G+ D + KR++  KIQ+LEREI  L+EELKS EGL PASRCCKE+  FV + S
Sbjct: 14  TPKAP-SGYPDLYRKRRETAKIQMLEREISFLEEELKSSEGLQPASRCCKEIADFVMANS 72

Query: 67  DPFTPIRKESDTESHHFRKQICSVP-----WIC--CSSSCLLQKKMA 106
           DP  P  K+ + +S    K +C +P     WIC  C   C   + ++
Sbjct: 73  DPLLPTSKK-NHQSCSLWKWLCDIPCFNLSWICHWCCDGCFEHQNLS 118


>Glyma17g05640.1 
          Length = 228

 Score = 78.6 bits (192), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 36/75 (48%), Positives = 52/75 (69%), Gaps = 1/75 (1%)

Query: 17  DFHGKRKQMVKIQVLEREIGVLQEELKSLEGLHPASRCCKELDAFVGSISDPFTPIRKES 76
           D +GKR++  ++ +LEREI  L+EELKS+EGL PASRCCKE+  +V + +DP  P  K+ 
Sbjct: 29  DLYGKRRETARVHMLEREITFLEEELKSVEGLQPASRCCKEIADYVMANADPLLPSTKK- 87

Query: 77  DTESHHFRKQICSVP 91
           +  S  F K +C +P
Sbjct: 88  NRRSCRFWKWLCGMP 102