Miyakogusa Predicted Gene

Lj3g3v2575910.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2575910.2 Non Chatacterized Hit- tr|D8R5Y8|D8R5Y8_SELML
Putative uncharacterized protein OS=Selaginella
moelle,43.82,0.000000000000007,39S RIBOSOMAL PROTEIN L43,NULL;
L51_S25_CI-B8,Ribosomal protein/NADH dehydrogenase domain;
Thioredox,CUFF.44201.2
         (90 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g17980.1                                                       174   2e-44
Glyma05g21810.1                                                       170   3e-43
Glyma07g04910.1                                                        72   1e-13

>Glyma17g17980.1 
          Length = 119

 Score =  174 bits (441), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 80/90 (88%), Positives = 87/90 (96%)

Query: 1   MESHLPEFKEKNPQLEVVTEMIRGQHPHLKGFYENKNQRVVCVKNLDPEDILLQATRLRN 60
           MESHLP FKEKNPQLEVVTE+IRGQHPHLK +Y+NKNQRV+CVKN+DPEDILL ATRLRN
Sbjct: 30  MESHLPTFKEKNPQLEVVTELIRGQHPHLKAYYKNKNQRVICVKNMDPEDILLHATRLRN 89

Query: 61  ALGRKVIKLRTRHVTKHPSVQGTWTTAVKY 90
           ALGRKV+KLRTRHVTKHPSVQGTWTTAV+Y
Sbjct: 90  ALGRKVVKLRTRHVTKHPSVQGTWTTAVEY 119


>Glyma05g21810.1 
          Length = 119

 Score =  170 bits (431), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 79/90 (87%), Positives = 86/90 (95%)

Query: 1   MESHLPEFKEKNPQLEVVTEMIRGQHPHLKGFYENKNQRVVCVKNLDPEDILLQATRLRN 60
           MESHLP FKEKNPQLEVVTE+IRGQHPHLKG+Y+NKNQRV+ VKN+DPEDILL ATRLRN
Sbjct: 30  MESHLPAFKEKNPQLEVVTELIRGQHPHLKGYYKNKNQRVISVKNMDPEDILLHATRLRN 89

Query: 61  ALGRKVIKLRTRHVTKHPSVQGTWTTAVKY 90
           ALGRKV+KLRTRHVTK PSVQGTWTTAV+Y
Sbjct: 90  ALGRKVVKLRTRHVTKRPSVQGTWTTAVEY 119


>Glyma07g04910.1 
          Length = 124

 Score = 72.4 bits (176), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 35/48 (72%), Positives = 38/48 (79%)

Query: 43  VKNLDPEDILLQATRLRNALGRKVIKLRTRHVTKHPSVQGTWTTAVKY 90
             N+  E    + TRLRNALGRKV+KLRTRHVTKHPSVQGTWT AVKY
Sbjct: 77  ASNMHEEYGSRRLTRLRNALGRKVVKLRTRHVTKHPSVQGTWTAAVKY 124