Miyakogusa Predicted Gene

Lj3g3v2532280.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2532280.1 Non Chatacterized Hit- tr|K3YZE7|K3YZE7_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si019655,36.29,0.00000004,LRRNT_2,Leucine-rich repeat-containing
N-terminal, type 2; LRR_1,Leucine-rich repeat; FAMILY NOT
NAM,CUFF.44155.1
         (220 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g42330.1                                                       142   3e-34
Glyma16g01750.1                                                       132   2e-31
Glyma07g05280.1                                                       131   6e-31
Glyma05g37130.1                                                        57   2e-08
Glyma08g02450.2                                                        57   2e-08
Glyma08g02450.1                                                        57   2e-08
Glyma11g02150.1                                                        55   7e-08
Glyma15g21620.1                                                        52   4e-07
Glyma17g14390.1                                                        50   3e-06
Glyma04g41770.1                                                        48   8e-06
Glyma02g29610.1                                                        48   8e-06

>Glyma03g42330.1 
          Length = 1060

 Score =  142 bits (358), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 92/180 (51%), Positives = 102/180 (56%), Gaps = 11/180 (6%)

Query: 33  VVQASLICNQIDRDSLLEFSGNXXXXXXXXXXXXXXXXXXXXXXXXEGVTCDGDQRVTHL 92
           +VQAS  CNQ+DRDSLL FS N                        EG+ CD D RV HL
Sbjct: 16  LVQAS-SCNQLDRDSLLSFSRNISSPSPLNWSASSVDCCSW-----EGIVCDEDLRVIHL 69

Query: 93  LLPSRGLFGVISPSLTNLAAXXXXXXXXXXXXXXXQSQFFSXXXXXXXXXXSYNRLSGEL 152
           LLPSR L G +SPSLTNL A                + FFS          S+N  SGEL
Sbjct: 70  LLPSRALSGFLSPSLTNLTALSRLNLSHNRLSGNLPNHFFSLLNHLQILDLSFNLFSGEL 129

Query: 153 PPFVADNSTSVVIQEVGLSSNLFNGTLPSSLLQHL----AGGSLISFNVSNNSFTGQIPT 208
           PPFVA N +   IQE+ +SSNLF+GTLP SLLQHL    AGGSL SFNVSNNSFTG IPT
Sbjct: 130 PPFVA-NISGNTIQELDMSSNLFHGTLPPSLLQHLADAGAGGSLTSFNVSNNSFTGHIPT 188


>Glyma16g01750.1 
          Length = 1061

 Score =  132 bits (333), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 77/142 (54%), Positives = 87/142 (61%), Gaps = 13/142 (9%)

Query: 79  EGVTCDGDQRVTHLLLPSRGLFGVISPSLTNLAAXXXXXXXXXXXXXXXQSQFFSXXXXX 138
           EG+TCDGD RVTHLLLPSRGL G ISPSLTNL++               Q  FFS     
Sbjct: 70  EGITCDGDLRVTHLLLPSRGLTGFISPSLTNLSSLSHLNLSHNRLSGTLQHHFFSLLNHL 129

Query: 139 XXXXXSYNRLSGELPPFVADNSTSVVIQEVGLSSNLFNGTLPSSLLQHLAGGSLISFNVS 198
                SYNRLSGELPPFV D S+  VIQE+ LS++              AGGS +S NVS
Sbjct: 130 LVLDLSYNRLSGELPPFVGDISSDGVIQELDLSTS-------------AAGGSFVSLNVS 176

Query: 199 NNSFTGQIPTSIFCTNDRNSSS 220
           NNS TG IPTS+FC ND N+SS
Sbjct: 177 NNSLTGHIPTSLFCINDHNNSS 198


>Glyma07g05280.1 
          Length = 1037

 Score =  131 bits (329), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 79/146 (54%), Positives = 87/146 (59%), Gaps = 17/146 (11%)

Query: 79  EGVTCDGDQRVTHLLLPSRGLFGVISPSLTNLAAXXXXXXXXXXXXXXXQSQFFSXXXXX 138
           EG+TCDGD RVTHLLLPSRGL G ISPSLTNL++               Q  FFS     
Sbjct: 43  EGITCDGDLRVTHLLLPSRGLTGFISPSLTNLSSLSQLNLSHNRLSGTLQHHFFSLLNHL 102

Query: 139 XXXXXSYNRLSGELPPFVAD----NSTSVVIQEVGLSSNLFNGTLPSSLLQHLAGGSLIS 194
                SYNRLSGELPPFV D    NS+  VIQE+ LS+               AGGS +S
Sbjct: 103 LVLDLSYNRLSGELPPFVGDISGKNSSGGVIQELDLSTA-------------AAGGSFVS 149

Query: 195 FNVSNNSFTGQIPTSIFCTNDRNSSS 220
            NVSNNS TG IPTS+FC ND NSSS
Sbjct: 150 LNVSNNSLTGHIPTSLFCVNDHNSSS 175


>Glyma05g37130.1 
          Length = 615

 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/132 (36%), Positives = 66/132 (50%), Gaps = 14/132 (10%)

Query: 80  GVTCDGDQ-RVTHLLLPSRGLFGVISP-SLTNLAAXXXXXXXXXXXXXXXQSQFFSXXXX 137
           GVTC+ D+ +V  + LP  G  G I P +++ L+A                S F S    
Sbjct: 59  GVTCNVDKSKVIAIRLPGVGFHGTIPPDTISRLSALQTLSLRSNVITGHFPSDF-SNLKN 117

Query: 138 XXXXXXSYNRLSGELPPFVADNSTSVVIQEVGLSSNLFNGTLPSSL--LQHLAGGSLISF 195
                  +N +SG LP F A  + +VV     LS+N FNGT+PSSL  L  LAG      
Sbjct: 118 LSFLYLQFNNISGPLPDFSAWKNLTVV----NLSNNHFNGTIPSSLNNLTQLAG-----L 168

Query: 196 NVSNNSFTGQIP 207
           N++NNS +G+IP
Sbjct: 169 NLANNSLSGEIP 180


>Glyma08g02450.2 
          Length = 638

 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/132 (35%), Positives = 66/132 (50%), Gaps = 14/132 (10%)

Query: 80  GVTCDGDQ-RVTHLLLPSRGLFGVISP-SLTNLAAXXXXXXXXXXXXXXXQSQFFSXXXX 137
           GVTC+ D+ +V  + LP  G  G I P +++ L+A                S FF+    
Sbjct: 59  GVTCNVDKSKVIAIRLPGVGFHGSIPPDTISRLSALQTLSLRSNVITGHFPSDFFNLKNL 118

Query: 138 XXXXXXSYNRLSGELPPFVADNSTSVVIQEVGLSSNLFNGTLPSSL--LQHLAGGSLISF 195
                  +N +SG LP F A  + +VV     LS N FNGT+PSSL  L  LAG      
Sbjct: 119 SFLYL-QFNNISGPLPDFSAWKNLTVV----NLSDNHFNGTIPSSLSKLTQLAG-----L 168

Query: 196 NVSNNSFTGQIP 207
           N++NN+ +G+IP
Sbjct: 169 NLANNTLSGEIP 180


>Glyma08g02450.1 
          Length = 638

 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/132 (35%), Positives = 66/132 (50%), Gaps = 14/132 (10%)

Query: 80  GVTCDGDQ-RVTHLLLPSRGLFGVISP-SLTNLAAXXXXXXXXXXXXXXXQSQFFSXXXX 137
           GVTC+ D+ +V  + LP  G  G I P +++ L+A                S FF+    
Sbjct: 59  GVTCNVDKSKVIAIRLPGVGFHGSIPPDTISRLSALQTLSLRSNVITGHFPSDFFNLKNL 118

Query: 138 XXXXXXSYNRLSGELPPFVADNSTSVVIQEVGLSSNLFNGTLPSSL--LQHLAGGSLISF 195
                  +N +SG LP F A  + +VV     LS N FNGT+PSSL  L  LAG      
Sbjct: 119 SFLYL-QFNNISGPLPDFSAWKNLTVV----NLSDNHFNGTIPSSLSKLTQLAG-----L 168

Query: 196 NVSNNSFTGQIP 207
           N++NN+ +G+IP
Sbjct: 169 NLANNTLSGEIP 180


>Glyma11g02150.1 
          Length = 597

 Score = 54.7 bits (130), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 48/135 (35%), Positives = 63/135 (46%), Gaps = 14/135 (10%)

Query: 80  GVTCDGDQ-RVTHLLLPSRGLFGVISPSLTNLAAXXXXXXXXXXXXXXXQSQF---FSXX 135
           GVTC+GD+ RV  + LP+ G  G I P   N  +                  F   FS  
Sbjct: 56  GVTCNGDKSRVIAIHLPAFGFHGTIPP---NTISRVTGLRTLSLRSNFINGHFPCDFSNL 112

Query: 136 XXXXXXXXSYNRLSGELPPFVADNSTSVVIQEVGLSSNLFNGTLPSSLLQHLAGGSLISF 195
                    +N  +G LP F A  + SVV     LS+N F GT+P SL  +L    L S 
Sbjct: 113 KNLSFLYLQFNNFTGPLPDFSAWRNLSVV----NLSNNFFTGTIPLSL-SNLT--QLTSM 165

Query: 196 NVSNNSFTGQIPTSI 210
           N+SNNS +G+IP S+
Sbjct: 166 NLSNNSLSGEIPLSL 180


>Glyma15g21620.1 
          Length = 218

 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 34/79 (43%), Positives = 39/79 (49%), Gaps = 4/79 (5%)

Query: 97  RGLFGVISPSLTNLAAXXXXXXXXXXXXXXXQSQFFSXXXXXXXXXXSYNRLSGELPPFV 156
           +GL G ISPSLTNL +               Q  F S          SYN LSG+LPPFV
Sbjct: 62  KGLAGFISPSLTNLCSVCQLNLSHNRLFGTLQHHFLSLVNHLLVLELSYNCLSGQLPPFV 121

Query: 157 AD----NSTSVVIQEVGLS 171
            D    NS+  VIQE+ LS
Sbjct: 122 VDISGKNSSGGVIQELDLS 140


>Glyma17g14390.1 
          Length = 685

 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 59/134 (44%), Gaps = 13/134 (9%)

Query: 80  GVTCDGDQRVTHLLLPSRGLFGVISPSLTNLAAXXXXXXXXXXXXXXXQSQFFSXXXXXX 139
           GV C+   +V ++ LP RGL GV+SP++  L                   +  +      
Sbjct: 61  GVVCNEHNKVANISLPGRGLSGVVSPAVAELKCLSGLYLHYNYLSGDIPREIVN-LKELL 119

Query: 140 XXXXSYNRLSGELPPFVADNSTSVVIQEVGLSSNLFNGTLPSSLLQHLAGGSLISFN--- 196
               ++N LSG +PP +A+ ++  V+Q   L  N   G +P  L      GSL   N   
Sbjct: 120 DLYLNFNNLSGTIPPDIANMTSLQVLQ---LGYNQLEGNIPEEL------GSLKQLNDIS 170

Query: 197 VSNNSFTGQIPTSI 210
           + +N   GQIP S+
Sbjct: 171 LQHNKLAGQIPQSL 184


>Glyma04g41770.1 
          Length = 633

 Score = 47.8 bits (112), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 49/134 (36%), Positives = 63/134 (47%), Gaps = 15/134 (11%)

Query: 79  EGVTCDGDQ-RVTHLLLPSRGLFGVISP-SLTNLAAXXXXXXXXXXXXXXXQSQFFSXXX 136
            GV C+ D+ RV  L LP  GL G ISP +L+ L+A                   FS   
Sbjct: 62  RGVICNSDESRVIELRLPGAGLSGPISPNTLSRLSALEVVSLRSNGISGPFPDG-FSELK 120

Query: 137 XXXXXXXSYNRLSGELP-PFVADNSTSVVIQEVGLSSNLFNGTLPSSL--LQHLAGGSLI 193
                    N+ SG LP  F   N+ SV    V LS+N FNG++P S+  L HL      
Sbjct: 121 NLTSLYLQSNKFSGSLPLDFSVWNNLSV----VNLSNNSFNGSIPFSISNLTHLT----- 171

Query: 194 SFNVSNNSFTGQIP 207
           S  ++NNS +GQIP
Sbjct: 172 SLVLANNSLSGQIP 185


>Glyma02g29610.1 
          Length = 615

 Score = 47.8 bits (112), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 46/133 (34%), Positives = 63/133 (47%), Gaps = 11/133 (8%)

Query: 80  GVTCDGDQRVTHLLLPSRGLFGVISPSLTNLAAXXXXXXXXXXXXXXXQSQFFSXXXXXX 139
           GVTC  +  VT L LPS+ L G +   L  LA                 +  F+      
Sbjct: 60  GVTCKHNH-VTQLTLPSKALTGYLPSELGFLAHLKRLSLPHNNLSHAIPTTLFNATTLLV 118

Query: 140 XXXXSYNRLSGELPPFVADNSTSVVIQEVGLSSNLFNGTLPSSL--LQHLAGGSLISFNV 197
               S+N L+G LP   A  S+   +  + LSSNL +G LP +L  L  LAG    + N+
Sbjct: 119 LDL-SHNALTGPLP---ASLSSLKRLVRLDLSSNLLSGHLPVTLSNLPSLAG----TLNL 170

Query: 198 SNNSFTGQIPTSI 210
           S+N FTG IP+S+
Sbjct: 171 SHNRFTGNIPSSL 183