Miyakogusa Predicted Gene

Lj3g3v2517860.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2517860.2 Non Chatacterized Hit- tr|A5BUV6|A5BUV6_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,36.97,2e-18,SUBFAMILY NOT NAMED,NULL; BED FINGER-RELATED,NULL;
C2H2 and C2HC zinc fingers,NULL; Hermes dimerisat,CUFF.44128.2
         (239 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g10320.1                                                        69   5e-12
Glyma10g23870.1                                                        63   3e-10
Glyma07g03280.1                                                        57   1e-08
Glyma15g14400.1                                                        51   1e-06
Glyma19g24990.1                                                        50   3e-06

>Glyma08g10320.1 
          Length = 736

 Score = 68.9 bits (167), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 50/88 (56%)

Query: 141 VGYNLEDCRRVLAEFVICDEMSFKVVEGRGFCKMINRLEPRFTVPSRVTVARDCYQHFLD 200
           V ++ E C + LA+ +I DE+ FK VE +GF + +   +P+F +PS++T+  DC      
Sbjct: 133 VEFHQEFCTQALAKMIIIDELPFKFVENKGFGEFVTAFQPQFKIPSQITIVEDCMNLHRV 192

Query: 201 EKKKLKSWFINSRIRVCTTTDCWTSCQN 228
            K KLK     ++  +  TTD WTS  N
Sbjct: 193 AKAKLKFNLSQNKQMMSLTTDTWTSIHN 220


>Glyma10g23870.1 
          Length = 390

 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 75/166 (45%), Gaps = 9/166 (5%)

Query: 60  KSIVWDHFTKLPLVETKGEHKAKCNHCCAIDSCHPNKHGTNSLNKHLRRSHQWIFSKVGN 119
           KS +W HF K   ++  G  K +C +C  +     +K+GT  L +H     Q+     G 
Sbjct: 73  KSKIWQHFKK---IKVNGLDKTECKYCKKLLGGK-SKNGTKHLWQHNEICVQYKIFMRGM 128

Query: 120 KGTLHGYMPKISEDGLGGTNSVGYNLEDCRRVLAEFVICDEMSFKVVEGRGFCKMINRLE 179
           KG      PK+ +    G   +G    D R  LA+ +I  E    + +  GF +    L+
Sbjct: 129 KGQAF-LTPKVVQ----GKQELGAGTYDAREQLAKAIIMHEYPLSIGDRLGFRRYSAALQ 183

Query: 180 PRFTVPSRVTVARDCYQHFLDEKKKLKSWFINSRIRVCTTTDCWTS 225
           P F VP+R T+ ++  + + +E+        +   RV  T+D WTS
Sbjct: 184 PVFQVPTRNTIKKEIMKIYENERATTLKLLDSLDGRVALTSDMWTS 229


>Glyma07g03280.1 
          Length = 661

 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/193 (27%), Positives = 87/193 (45%), Gaps = 25/193 (12%)

Query: 59  RKSIVWDHFTKLPLVETKGEH--KAKCNHCCAIDSCHPNKH--GTNSLNKHL-------- 106
           +KS+VWD+FT    VET G    +A C  C    S   +    GT+ L +H+        
Sbjct: 28  KKSMVWDYFT----VETVGAGCTRAYCKQCKKSFSYITDSKLSGTSHLKRHISLGICRVL 83

Query: 107 -RRSHQWIFSKVGNKGTLHGYMPKISED----GLGGTNSVGYNLEDCRRVLAEFVICDEM 161
             ++ Q  + K G  G+L    P   +     G  G N + ++ E C   +A+ +I  + 
Sbjct: 84  WEKNQQRSYPKTG--GSLDTANPPKKQPRATPGFAG-NGISFDQERCNHDVAKMIILHDY 140

Query: 162 SFKVVEGRGFCKMINRLEPRFTVPSRVTVARDCYQHFLDEKKKLKSWFINSRIRVCTTTD 221
              +V+ +GF   +  L+P+F      +V  DC   +L +K+ L +       +V  T D
Sbjct: 141 PLHIVKQQGFIDFVRILQPQFNPLCLNSVEGDCVAIYLRKKQNLLNVINGIPGQVNLTLD 200

Query: 222 CWTSCQNFILYVF 234
            WTS Q  + YVF
Sbjct: 201 LWTSNQA-MGYVF 212


>Glyma15g14400.1 
          Length = 315

 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 6/73 (8%)

Query: 156 VICDEMSFKVVEGRGFCKMINRLEPRFTVPSRVTVARDCYQHFLDEKKKLKSWFINSRIR 215
           +I DE++FK VE  GF K +   +P+F +       R C   F DE +KL      ++  
Sbjct: 2   IIIDELAFKFVENEGFRKFMEDAQPKFIIT------RYCMHVFNDENEKLMHVLFANKQM 55

Query: 216 VCTTTDCWTSCQN 228
              TTD WTS QN
Sbjct: 56  FSLTTDIWTSIQN 68


>Glyma19g24990.1 
          Length = 443

 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/59 (44%), Positives = 33/59 (55%)

Query: 171 FCKMINRLEPRFTVPSRVTVARDCYQHFLDEKKKLKSWFINSRIRVCTTTDCWTSCQNF 229
           F K +   +P+F +PSRVT AR C   F DEK+KLK     ++  V  T D  TS QN 
Sbjct: 64  FRKFMEDAQPKFKIPSRVTTARYCMHVFNDEKEKLKHVLSANKQMVSLTMDTLTSIQNM 122