Miyakogusa Predicted Gene

Lj3g3v2477720.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2477720.1 Non Chatacterized Hit- tr|K4B006|K4B006_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,30.22,4e-16,seg,NULL; coiled-coil,NULL,CUFF.44065.1
         (296 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g05930.1                                                       231   9e-61
Glyma19g44700.1                                                        61   2e-09
Glyma16g02530.1                                                        57   3e-08
Glyma04g39320.1                                                        50   3e-06

>Glyma07g05930.1 
          Length = 710

 Score =  231 bits (588), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 148/312 (47%), Positives = 172/312 (55%), Gaps = 64/312 (20%)

Query: 1   MVEHLELADHDVAFIAELIDYLIVKLLPWWKPSPDHKSSGEFSLNGGGSTTADSETFMAC 60
           MVEHLELADHDV FIAELIDYLI+KLLPWWKPSPDH S GE S      T  D +T MA 
Sbjct: 447 MVEHLELADHDVDFIAELIDYLIMKLLPWWKPSPDHCSCGELS---PYCTNIDGQTLMAW 503

Query: 61  SCGSVLTSFPSKLAIDQHNFYGFNTAPGESFMTAEKSCSYKNVDNACFDSVSDYKSSPSL 120
             GSV TS PS+L I Q  F                                        
Sbjct: 504 PWGSVSTSIPSELVIGQDGF---------------------------------------- 523

Query: 121 FTSGFNTTPGESFMTAEKSCFYKNANNASFDSDYMSSPSLFNLEDRYSQESGASEIVIED 180
             SG +TTP E F+ +E S   K ANNA+F+ D  SS SL  LEDRYSQ S ASE++IE+
Sbjct: 524 --SGSDTTPKEDFVVSENSSVSKIANNATFEGDCNSS-SLVKLEDRYSQGSRASEMIIEN 580

Query: 181 ASVKNDEFHDSNVDGSFGCLSRSVSELELGDAYFKDCILQATD-C------------SAG 227
            S+KND  HDSN D        S S  EL D YF+DC LQ T+ C            ++G
Sbjct: 581 TSMKNDNCHDSNDD--LSSKCFSSSMSELRDVYFEDCKLQQTEYCVGEGVVINEFPKNSG 638

Query: 228 SICGTXXXXXXXXXXXXXI---EKEIDLELKFQLDAIELQYQHWMEELNRMKLEALEATR 284
           S+ GT             +   E++IDL LKF+LD IE  YQHW++ELN M LEALE+TR
Sbjct: 639 SVLGTSINVENLASSCSYVSSTEEDIDLGLKFKLDEIEAHYQHWIDELNEMMLEALESTR 698

Query: 285 RRWMAKKKEAVH 296
           RRWMAKKK A  
Sbjct: 699 RRWMAKKKLAAQ 710


>Glyma19g44700.1 
          Length = 437

 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/79 (45%), Positives = 50/79 (63%), Gaps = 10/79 (12%)

Query: 1   MVEHLELADHDVAFIAELIDYLIVKLLPWWKPSPDHKSSGEFSLNGGGSTTADSETFMAC 60
           M E+LEL ++DVAFI ELIDYLI++L+  WKPS D+ S      NGG     +++T ++ 
Sbjct: 319 MAENLELENNDVAFIVELIDYLIMELVLGWKPSFDYSS------NGG----LNNQTSISF 368

Query: 61  SCGSVLTSFPSKLAIDQHN 79
                L S PS+L +DQ N
Sbjct: 369 PWVRALASVPSELVLDQDN 387


>Glyma16g02530.1 
          Length = 388

 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 26/28 (92%), Positives = 27/28 (96%)

Query: 1   MVEHLELADHDVAFIAELIDYLIVKLLP 28
           MVEHLELADHDV FIAELIDYLI+KLLP
Sbjct: 360 MVEHLELADHDVDFIAELIDYLIMKLLP 387


>Glyma04g39320.1 
          Length = 320

 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/70 (42%), Positives = 42/70 (60%), Gaps = 7/70 (10%)

Query: 1   MVEHLELADHDVAFIAELIDYLIVKLLPWWKP--SPDH--KSSGEFSLNGGGSTTADSE- 55
           MVE LELA+ +V FIAELID L++  LP WKP    DH   S+ ++  +  GS+   +E 
Sbjct: 154 MVEQLELAEQNVKFIAELIDLLLITSLPDWKPCVEIDHLVSSNAKYKHSSEGSSQIVAED 213

Query: 56  --TFMACSCG 63
             +FM+   G
Sbjct: 214 VVSFMSAKSG 223